Cow genome map

Conread name: unkn-MI-P-A3-ade-a-01-1-UM.s1

Conread position: 7-173
Cow position: chr12:30414066-30413888 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 16-221
Cow position: chr12:33319777-33319564 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 57

Conread position: 18-194
Cow position: chr12:47804047-47804234 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 65

Conread position: 18-280
Cow position: chr12:11587667-11587931 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 10

Conread position: 18-284
Cow position: chr12:33976093-33976369 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 62

Conread position: 18-291
Cow position: chr12:20479436-20479172 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 19-158
Cow position: chr12:3906367-3906515 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 19-178
Cow position: chr12:22881948-22882118 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 59

Conread position: 19-180
Cow position: chr12:8868983-8868818 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 19-180
Cow position: chr12:18964033-18963864 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 46

Conread position: 19-180
Cow position: chr12:44905537-44905691 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 15

Conread position: 19-182
Cow position: chr12:24211306-24211473 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 63

Conread position: 19-183
Cow position: chr12:28582610-28582443 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 62

Conread position: 19-185
Cow position: chr12:31429676-31429502 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 63

Conread position: 19-185
Cow position: chr12:42174314-42174485 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 38

Conread position: 19-188
Cow position: chr12:6210264-6210086 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 60

Conread position: 19-188
Cow position: chr12:18943764-18943586 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 62

Conread position: 19-188
Cow position: chr12:23797997-23798171 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 58

Conread position: 19-190
Cow position: chr12:12304279-12304455 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 64

Conread position: 19-192
Cow position: chr12:34161310-34161490 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 59

Conread position: 19-193
Cow position: chr12:30438135-30438314 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 60

Conread position: 19-194
Cow position: chr12:19715146-19714960 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 110

Conread position: 19-194
Cow position: chr12:31517279-31517093 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 63

Conread position: 19-194
Cow position: chr12:44517842-44517659 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 19-194
Cow position: chr12:44595917-44595731 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 61

Conread position: 19-195
Cow position: chr12:19691340-19691154 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 65

Conread position: 19-197
Cow position: chr12:15173719-15173905 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 16

Conread position: 19-197
Cow position: chr12:23916737-23916924 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 65

Conread position: 19-199
Cow position: chr12:3197164-3197350 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 46

Conread position: 19-214
Cow position: chr12:25320816-25321007 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 58

Conread position: 19-216
Cow position: chr12:38184491-38184695 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 44

Conread position: 19-219
Cow position: chr12:25444820-25445017 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 17

Conread position: 19-219
Cow position: chr12:31959781-31959985 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 61

Conread position: 19-220
Cow position: chr12:2711390-2711605 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 58

Conread position: 19-221
Cow position: chr12:44919928-44920138 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 68

Conread position: 19-222
Cow position: chr12:29969474-29969682 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 22

Conread position: 19-227
Cow position: chr12:41581012-41581220 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 29

Conread position: 19-241
Cow position: chr12:22485712-22485923 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 50

Conread position: 19-249
Cow position: chr12:27562935-27562715 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 62

Conread position: 19-250
Cow position: chr12:4866716-4866937 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 25

Conread position: 19-250
Cow position: chr12:5635553-5635329 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 15

Conread position: 19-250
Cow position: chr12:23939117-23939342 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 140

Conread position: 19-250
Cow position: chr12:31532516-31532283 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 70

Conread position: 19-250
Cow position: chr12:33323601-33323371 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 163

Conread position: 19-250
Cow position: chr12:33851252-33851479 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 63

Conread position: 19-251
Cow position: chr12:24152231-24152466 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 35, 46

Conread position: 19-251
Cow position: chr12:31228468-31228707 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 94, 158

Conread position: 19-251
Cow position: chr12:37993829-37993598 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 80, 33

Conread position: 19-258
Cow position: chr12:25192944-25193173 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 29

Conread position: 19-274
Cow position: chr12:30753617-30753875 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 106, 35

Conread position: 19-275
Cow position: chr12:3623588-3623848 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 62

Conread position: 19-280
Cow position: chr12:1889686-1889418 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 64

Conread position: 19-280
Cow position: chr12:4341846-4341573 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 90, 35

Conread position: 19-280
Cow position: chr12:6410840-6410575 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 35, 61

Conread position: 19-280
Cow position: chr12:38774345-38774083 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 90, 54

Conread position: 19-282
Cow position: chr12:11836125-11836392 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 183

Conread position: 19-282
Cow position: chr12:19258173-19258440 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 178

Conread position: 19-282
Cow position: chr12:34466113-34465854 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 199

Conread position: 19-283
Cow position: chr12:7000710-7000418 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 29, 58

Conread position: 19-283
Cow position: chr12:7110094-7110373 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 46

Conread position: 19-283
Cow position: chr12:46333244-46333507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 92, 155

Conread position: 19-284
Cow position: chr12:4596359-4596639 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 29

Conread position: 19-284
Cow position: chr12:5714522-5714784 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 131

Conread position: 19-284
Cow position: chr12:9914683-9914947 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 62

Conread position: 19-284
Cow position: chr12:25917375-25917118 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 24

Conread position: 19-284
Cow position: chr12:30590661-30590936 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 91, 37

Conread position: 19-284
Cow position: chr12:34007199-34007465 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 45, 62

Conread position: 19-285
Cow position: chr12:17881757-17882022 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 15

Conread position: 19-285
Cow position: chr12:35771125-35770857 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 172

Conread position: 19-290
Cow position: chr12:8943326-8943040 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 22

Conread position: 19-291
Cow position: chr12:37170049-37169776 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 17

Conread position: 19-296
Cow position: chr12:6241206-6241505 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 18

Conread position: 19-296
Cow position: chr12:16670159-16670444 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 64

Conread position: 19-296
Cow position: chr12:25561264-25561543 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 193

Conread position: 19-296
Cow position: chr12:40910395-40910108 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 15

Conread position: 19-296
Cow position: chr12:42162933-42163220 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 176

Conread position: 19-297
Cow position: chr12:7884788-7884501 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 63

Conread position: 19-304
Cow position: chr12:38852136-38851834 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 10

Conread position: 19-305
Cow position: chr12:21780058-21780353 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 60

Conread position: 19-312
Cow position: chr12:26217932-26217635 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 29, 179

Conread position: 19-316
Cow position: chr12:18766084-18765777 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 211

Conread position: 20-182
Cow position: chr12:1030873-1031045 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 20-185
Cow position: chr12:25188081-25188257 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 20-191
Cow position: chr12:23855732-23855907 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 67

Conread position: 20-191
Cow position: chr12:25452553-25452372 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 13, 62

Conread position: 20-221
Cow position: chr12:18572524-18572728 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 53

Conread position: 20-250
Cow position: chr12:30919312-30919557 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 20, 68

Conread position: 20-284
Cow position: chr12:30210377-30210636 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 20-284
Cow position: chr12:37008809-37008544 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 62

Conread position: 20-291
Cow position: chr12:35780028-35779747 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 58

Conread position: 20-295
Cow position: chr12:13643128-13643415 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 59

Conread position: 20-299
Cow position: chr12:9482408-9482121 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 28

Conread position: 21-163
Cow position: chr12:9894680-9894829 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 57

Conread position: 21-213
Cow position: chr12:29780009-29779815 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 15

Conread position: 21-229
Cow position: chr12:2286481-2286695 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 43

Conread position: 21-249
Cow position: chr12:23574659-23574892 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 14

Conread position: 21-251
Cow position: chr12:36501050-36500823 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 52

Conread position: 21-275
Cow position: chr12:7299565-7299314 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 59

Conread position: 21-279
Cow position: chr12:15050721-15050464 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 56

Conread position: 21-281
Cow position: chr12:19866138-19866409 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 94, 42

Conread position: 21-284
Cow position: chr12:34473728-34473442 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 67

Conread position: 21-294
Cow position: chr12:44622250-44622535 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 55

Conread position: 21-295
Cow position: chr12:4719842-4720122 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 14

Conread position: 21-295
Cow position: chr12:10942181-10942471 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 57

Conread position: 21-295
Cow position: chr12:13988267-13988551 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 27

Conread position: 21-295
Cow position: chr12:42282937-42282663 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 40

Conread position: 21-305
Cow position: chr12:42602346-42602050 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 54

Conread position: 21-319
Cow position: chr12:34165483-34165797 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 58

Conread position: 22-184
Cow position: chr12:33458042-33458215 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 22-209
Cow position: chr12:7977932-7978132 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 64

Conread position: 22-215
Cow position: chr12:3950450-3950246 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 61

Conread position: 22-226
Cow position: chr12:42233953-42234172 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 53

Conread position: 22-251
Cow position: chr12:35241206-35240979 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 42

Conread position: 22-284
Cow position: chr12:9229589-9229350 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 44

Conread position: 22-284
Cow position: chr12:30805751-30806019 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 58

Conread position: 22-291
Cow position: chr12:12300818-12301100 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 26

Conread position: 22-291
Cow position: chr12:42285865-42286137 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 61

Conread position: 22-296
Cow position: chr12:3880083-3879791 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 32, 19

Conread position: 22-328
Cow position: chr12:46120933-46120618 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 37

Conread position: 23-195
Cow position: chr12:5680578-5680764 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 23-249
Cow position: chr12:42254565-42254791 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 74

Conread position: 23-249
Cow position: chr12:48415618-48415397 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 62

Conread position: 23-250
Cow position: chr12:30662049-30661826 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 19

Conread position: 23-250
Cow position: chr12:42966897-42967118 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 59

Conread position: 23-279
Cow position: chr12:27563479-27563218 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 11

Conread position: 23-286
Cow position: chr12:35652962-35652700 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 74

Conread position: 23-298
Cow position: chr12:18103713-18103436 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 60

Conread position: 23-310
Cow position: chr12:26750061-26749755 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 183

Conread position: 23-320
Cow position: chr12:31269048-31269360 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 187

Conread position: 24-181
Cow position: chr12:17716973-17717127 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 30

Conread position: 24-191
Cow position: chr12:40110282-40110446 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 41

Conread position: 24-221
Cow position: chr12:29995561-29995357 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 24-253
Cow position: chr12:5800932-5801181 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 63

Conread position: 24-282
Cow position: chr12:41159490-41159745 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 24-283
Cow position: chr12:36012716-36012447 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 59

Conread position: 24-284
Cow position: chr12:32051410-32051686 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 58

Conread position: 24-291
Cow position: chr12:35368540-35368818 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 185

Conread position: 24-334
Cow position: chr12:25280605-25280289 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 59

Conread position: 26-276
Cow position: chr12:32169440-32169704 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 193

Conread position: 26-284
Cow position: chr12:18523464-18523750 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 227

Conread position: 29-197
Cow position: chr12:40200607-40200777 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 164

Conread position: 29-217
Cow position: chr12:41473991-41474189 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 172

Conread position: 29-309
Cow position: chr12:43610942-43610682 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 10

Conread position: 30-284
Cow position: chr12:31883249-31883512 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 53, 33

Conread position: 33-296
Cow position: chr12:42749348-42749623 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 42

Conread position: 35-204
Cow position: chr12:3615910-3616085 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 38-191
Cow position: chr12:4134990-4135152 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 43

Conread position: 40-250
Cow position: chr12:25809345-25809558 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 35

Conread position: 45-210
Cow position: chr12:4797222-4797394 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 45-284
Cow position: chr12:42698313-42698075 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 8

Conread position: 47-221
Cow position: chr12:29770648-29770472 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 47-251
Cow position: chr12:37255943-37256142 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 33

Conread position: 48-244
Cow position: chr12:7457618-7457424 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 25

Conread position: 48-282
Cow position: chr12:4768850-4769083 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 31

Conread position: 48-285
Cow position: chr12:42181204-42180964 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 24, 31

Conread position: 49-249
Cow position: chr12:10834198-10834009 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 53-293
Cow position: chr12:23836261-23836509 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 26

Conread position: 54-290
Cow position: chr12:29966037-29966278 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 26

Conread position: 55-194
Cow position: chr12:4793129-4793276 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 55-284
Cow position: chr12:24181081-24181309 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 51

Conread position: 56-255
Cow position: chr12:3371920-3371731 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 118

Conread position: 56-279
Cow position: chr12:45168086-45167847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 23

Conread position: 56-288
Cow position: chr12:36994183-36993923 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 191

Conread position: 56-306
Cow position: chr12:14222915-14223172 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 22

Conread position: 58-288
Cow position: chr12:4594436-4594669 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 21

Conread position: 58-297
Cow position: chr12:45002132-45001893 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 21

Conread position: 59-179
Cow position: chr12:25110502-25110378 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 59-229
Cow position: chr12:44901197-44901371 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 108

Conread position: 63-216
Cow position: chr12:45014619-45014782 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 64-188
Cow position: chr12:1701864-1701733 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 11

Conread position: 65-265
Cow position: chr12:7920185-7920384 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 13

Conread position: 65-291
Cow position: chr12:23764436-23764672 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 55

Conread position: 76-304
Cow position: chr12:6958180-6958406 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 174, 16

Conread position: 77-220
Cow position: chr12:15790021-15790161 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 78-209
Cow position: chr12:5543838-5543703 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 78-214
Cow position: chr12:45723271-45723409 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 115

Conread position: 78-284
Cow position: chr12:24186527-24186316 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 31

Conread position: 78-294
Cow position: chr12:22894125-22894348 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 101

Conread position: 78-295
Cow position: chr12:26868858-26868641 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 118

Conread position: 78-296
Cow position: chr12:24663069-24663289 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 126

Conread position: 78-312
Cow position: chr12:36261644-36261884 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 123

Conread position: 78-316
Cow position: chr12:24437680-24437436 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 183

Conread position: 78-319
Cow position: chr12:23105892-23106140 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 110

Conread position: 79-335
Cow position: chr12:22859423-22859667 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 110

Conread position: 81-257
Cow position: chr12:6226186-6226013 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 68

Conread position: 81-295
Cow position: chr12:43974251-43974469 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 109

Conread position: 82-188
Cow position: chr12:40270103-40269994 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 82-250
Cow position: chr12:42143119-42143303 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 83-280
Cow position: chr12:15832159-15832369 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 152

Conread position: 86-295
Cow position: chr12:20654507-20654304 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 13

Conread position: 86-304
Cow position: chr12:25456371-25456612 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 30, 151

Conread position: 88-296
Cow position: chr12:27430471-27430697 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 208

Conread position: 90-291
Cow position: chr12:24397196-24396992 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 54

Conread position: 98-312
Cow position: chr12:20355197-20355420 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 154, 92

Conread position: 100-305
Cow position: chr12:583526-583319 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 97

Conread position: 101-282
Cow position: chr12:28651098-28651287 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 86, 137

Conread position: 101-296
Cow position: chr12:30476490-30476690 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 93

Conread position: 101-297
Cow position: chr12:22047906-22048102 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 89

Conread position: 104-281
Cow position: chr12:28598251-28598434 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 121

Conread position: 111-291
Cow position: chr12:11583704-11583896 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 113-291
Cow position: chr12:43644170-43644002 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 168, 77

Conread position: 113-291
Cow position: chr12:43645501-43645335 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 114-275
Cow position: chr12:21819430-21819579 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 114-296
Cow position: chr12:43551224-43551038 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 67

Conread position: 114-297
Cow position: chr12:22469510-22469702 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 115

Conread position: 118-301
Cow position: chr12:3454696-3454880 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 72

Conread position: 124-294
Cow position: chr12:26945827-26945669 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 124-309
Cow position: chr12:15509754-15509580 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 129-295
Cow position: chr12:44892220-44892388 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 123, 38

Conread position: 136-309
Cow position: chr12:18418449-18418623 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 66

Show alignments to all cow chromosomes.