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Cow genome map

           
Conread name:
           
unkn-MI-P-A3-ade-a-01-1-UM.s1
        

               
Conread position:
               
17-282
               

               
Cow position:
               
chr14:48744625-48744355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
17-285
               

               
Cow position:
               
chr14:49488074-49487801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 183
               

               
Conread position:
               
18-189
               

               
Cow position:
               
chr14:40034096-40033927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
18-250
               

               
Cow position:
               
chr14:48496038-48496266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
18-251
               

               
Cow position:
               
chr14:19851822-19852056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr14:8923473-8923749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr14:14622069-14622330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 177
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr14:31130268-31130551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
19-177
               

               
Cow position:
               
chr14:41180599-41180771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
19-179
               

               
Cow position:
               
chr14:14187442-14187273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
19-183
               

               
Cow position:
               
chr14:16834435-16834259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
19-183
               

               
Cow position:
               
chr14:20384875-20385048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
19-183
               

               
Cow position:
               
chr14:25381531-25381368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr14:37422678-37422847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
19-186
               

               
Cow position:
               
chr14:23478930-23478761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
19-186
               

               
Cow position:
               
chr14:47511067-47510895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr14:1868275-1868451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr14:6175692-6175529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr14:20600495-20600317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr14:40474671-40474497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr14:41252879-41253060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr14:41267641-41267800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
19-190
               

               
Cow position:
               
chr14:33773940-33774117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chr14:33309397-33309574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr14:14316992-14316814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chr14:19863323-19863509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr14:17841179-17841365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
19-197
               

               
Cow position:
               
chr14:30662096-30661918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
19-204
               

               
Cow position:
               
chr14:13810047-13809856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
19-206
               

               
Cow position:
               
chr14:5836017-5835826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
19-213
               

               
Cow position:
               
chr14:8101900-8101703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chr14:4991115-4990909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 178
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr14:26097582-26097791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr14:42437135-42436929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr14:33830406-33830207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr14:1977961-1978175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr14:34983973-34983769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
19-231
               

               
Cow position:
               
chr14:16352455-16352231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
19-249
               

               
Cow position:
               
chr14:21933231-21933463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr14:10693149-10693376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 169
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr14:27077096-27076847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 192
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr14:28115076-28115310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr14:41128004-41127787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr14:41471862-41472095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chr14:33300812-33300574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
19-258
               

               
Cow position:
               
chr14:7695377-7695135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr14:37447360-37447611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr14:1646082-1646326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr14:4202984-4203240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr14:5630271-5630015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 174
               

               
Conread position:
               
19-276
               

               
Cow position:
               
chr14:19594020-19594289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 212
               

               
Conread position:
               
19-281
               

               
Cow position:
               
chr14:4877122-4877387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
45, 197
               

               
Conread position:
               
19-281
               

               
Cow position:
               
chr14:33791296-33791034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
19-282
               

               
Cow position:
               
chr14:48838705-48838431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr14:8786442-8786698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 58
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr14:23424367-23424104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
90, 151
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr14:24387558-24387287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 181
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr14:8541105-8541369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr14:12634777-12635039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr14:23443128-23442864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
90, 151
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr14:37883804-37884094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chr14:41302723-41303006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr14:6541614-6541897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr14:18309187-18309471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 190
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr14:25779207-25778927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr14:38747776-38747513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
234, 35
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr14:38921059-38920788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr14:47672777-47673048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr14:11056630-11056904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr14:21964228-21963944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr14:6226517-6226815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr14:12511791-12512063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr14:23761980-23761717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr14:26442230-26442519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
19-297
               

               
Cow position:
               
chr14:48740761-48741041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 160
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chr14:19618641-19618916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr14:24981564-24981259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
19-335
               

               
Cow position:
               
chr14:4282398-4282725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
19-339
               

               
Cow position:
               
chr14:41486150-41486478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
20-165
               

               
Cow position:
               
chr14:22966861-22966711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
20-203
               

               
Cow position:
               
chr14:39778864-39778668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
20-215
               

               
Cow position:
               
chr14:18763335-18763528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
20-216
               

               
Cow position:
               
chr14:12035516-12035310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
20-228
               

               
Cow position:
               
chr14:33247323-33247539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
20-228
               

               
Cow position:
               
chr14:49021794-49022002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
20-248
               

               
Cow position:
               
chr14:7036246-7036477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
20-250
               

               
Cow position:
               
chr14:28378469-28378238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 180
               

               
Conread position:
               
20-283
               

               
Cow position:
               
chr14:24945380-24945655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chr14:12244273-12244555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr14:22941613-22941916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr14:36442908-36443208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
20-320
               

               
Cow position:
               
chr14:1796299-1795999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
21-132
               

               
Cow position:
               
chr14:33828268-33828157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
21-182
               

               
Cow position:
               
chr14:25403830-25403997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
21-186
               

               
Cow position:
               
chr14:10697398-10697567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chr14:13426954-13426782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chr14:48412772-48412950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chr14:48689631-48689462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
21-192
               

               
Cow position:
               
chr14:25385778-25385959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
21-224
               

               
Cow position:
               
chr14:16033116-16032911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 174
               

               
Conread position:
               
21-225
               

               
Cow position:
               
chr14:40165531-40165320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr14:19394467-19394252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 58
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr14:12520197-12520423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr14:45312900-45312677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
21-275
               

               
Cow position:
               
chr14:15504046-15504310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
21-279
               

               
Cow position:
               
chr14:11285683-11285413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
21-279
               

               
Cow position:
               
chr14:45052548-45052281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr14:12954274-12954536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr14:36289691-36289952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr14:43192946-43192701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr14:28304676-28304956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr14:28987803-28987520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
21-293
               

               
Cow position:
               
chr14:38144001-38144283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr14:1708549-1708832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr14:16344061-16344320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
230, 27
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chr14:29965125-29964841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chr14:33341864-33341578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chr14:1803007-1803302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
22-156
               

               
Cow position:
               
chr14:42785063-42784928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
22-185
               

               
Cow position:
               
chr14:803794-803621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
22-188
               

               
Cow position:
               
chr14:1868690-1868868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
22-191
               

               
Cow position:
               
chr14:36555051-36555217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
22-192
               

               
Cow position:
               
chr14:18904503-18904678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
22-194
               

               
Cow position:
               
chr14:7959884-7959712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
22-212
               

               
Cow position:
               
chr14:9901285-9901091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr14:42419167-42419431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
22-281
               

               
Cow position:
               
chr14:34331218-34331505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
22-281
               

               
Cow position:
               
chr14:42330459-42330187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr14:10858540-10858278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
22-294
               

               
Cow position:
               
chr14:7198610-7198327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
23-192
               

               
Cow position:
               
chr14:12127306-12127482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
23-193
               

               
Cow position:
               
chr14:33644059-33643887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
23-213
               

               
Cow position:
               
chr14:18657498-18657699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
23-221
               

               
Cow position:
               
chr14:25824795-25824594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
23-250
               

               
Cow position:
               
chr14:2974985-2975205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
23-278
               

               
Cow position:
               
chr14:40754138-40754400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
23-283
               

               
Cow position:
               
chr14:6735753-6736029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
23-284
               

               
Cow position:
               
chr14:48961683-48961413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
23-290
               

               
Cow position:
               
chr14:20712584-20712852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chr14:50362901-50362625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 189
               

               
Conread position:
               
23-292
               

               
Cow position:
               
chr14:25399179-25398903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 197
               

               
Conread position:
               
23-335
               

               
Cow position:
               
chr14:33456935-33457255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 178
               

               
Conread position:
               
24-188
               

               
Cow position:
               
chr14:27275264-27275095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr14:21357665-21357438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 172
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chr14:35503469-35503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr14:23103891-23104170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr14:35381695-35381411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
24-297
               

               
Cow position:
               
chr14:19129614-19129324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
24-297
               

               
Cow position:
               
chr14:24236932-24236645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
25-185
               

               
Cow position:
               
chr14:46998140-46997974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
25-263
               

               
Cow position:
               
chr14:39095077-39095323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
26-291
               

               
Cow position:
               
chr14:26655032-26655305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr14:3943452-3943665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
30-249
               

               
Cow position:
               
chr14:41190985-41191216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 180
               

               
Conread position:
               
33-219
               

               
Cow position:
               
chr14:22583243-22583055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
33-294
               

               
Cow position:
               
chr14:27044677-27044958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 210
               

               
Conread position:
               
35-250
               

               
Cow position:
               
chr14:34775654-34775868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
39-251
               

               
Cow position:
               
chr14:21529990-21530196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
39-298
               

               
Cow position:
               
chr14:14466381-14466638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
212, 16
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr14:34399714-34399885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
46-216
               

               
Cow position:
               
chr14:34096486-34096662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
46-251
               

               
Cow position:
               
chr14:48427152-48426952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
46-298
               

               
Cow position:
               
chr14:4848427-4848175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
48-250
               

               
Cow position:
               
chr14:28924248-28924046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
49-295
               

               
Cow position:
               
chr14:40230562-40230809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
52-291
               

               
Cow position:
               
chr14:18941209-18941456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
53-194
               

               
Cow position:
               
chr14:25954126-25954269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
55-258
               

               
Cow position:
               
chr14:24712552-24712760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
55-290
               

               
Cow position:
               
chr14:10078340-10078086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 185
               

               
Conread position:
               
55-294
               

               
Cow position:
               
chr14:37479423-37479206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
55-300
               

               
Cow position:
               
chr14:25919925-25919671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr14:40952329-40952132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
56-284
               

               
Cow position:
               
chr14:12033170-12033407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
56-286
               

               
Cow position:
               
chr14:23078721-23078951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
56-305
               

               
Cow position:
               
chr14:10609751-10609501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
57-286
               

               
Cow position:
               
chr14:20467000-20466771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
57-297
               

               
Cow position:
               
chr14:11577138-11576895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
57-298
               

               
Cow position:
               
chr14:42439842-42440098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 137
               

               
Conread position:
               
57-323
               

               
Cow position:
               
chr14:16749615-16749896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 181
               

               
Conread position:
               
58-275
               

               
Cow position:
               
chr14:20481774-20482005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
59-307
               

               
Cow position:
               
chr14:38285902-38286171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
60-226
               

               
Cow position:
               
chr14:39037288-39037116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
63-283
               

               
Cow position:
               
chr14:5958923-5959154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
66-250
               

               
Cow position:
               
chr14:26919057-26918874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
66-296
               

               
Cow position:
               
chr14:20234132-20234366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
71-216
               

               
Cow position:
               
chr14:42276679-42276529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
78-214
               

               
Cow position:
               
chr14:15491205-15491062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
78-248
               

               
Cow position:
               
chr14:18350808-18350984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
78-296
               

               
Cow position:
               
chr14:27364627-27364408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
6, 117
               

               
Conread position:
               
78-296
               

               
Cow position:
               
chr14:45955330-45955113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
174, 29
               

               
Conread position:
               
78-318
               

               
Cow position:
               
chr14:18302010-18301762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
81-304
               

               
Cow position:
               
chr14:18270401-18270175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 165
               

               
Conread position:
               
85-250
               

               
Cow position:
               
chr14:38673879-38674050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
85-284
               

               
Cow position:
               
chr14:33828162-33827945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
101-296
               

               
Cow position:
               
chr14:3923930-3923741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
102-243
               

               
Cow position:
               
chr14:9769940-9770082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
102-290
               

               
Cow position:
               
chr14:23465031-23465220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 88
               

               
Conread position:
               
104-291
               

               
Cow position:
               
chr14:44152960-44153157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 105
               

               
Conread position:
               
104-294
               

               
Cow position:
               
chr14:8027544-8027739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 86
               

               
Conread position:
               
107-291
               

               
Cow position:
               
chr14:25912664-25912485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 90
               

               
Conread position:
               
110-248
               

               
Cow position:
               
chr14:24806607-24806479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
110-250
               

               
Cow position:
               
chr14:25290824-25290689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr14:32784102-32784277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
111-323
               

               
Cow position:
               
chr14:24746476-24746256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
114-275
               

               
Cow position:
               
chr14:20071077-20070909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
114-279
               

               
Cow position:
               
chr14:6595625-6595470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr14:27303664-27303487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
114-298
               

               
Cow position:
               
chr14:11831783-11831974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 168
               

               
Conread position:
               
118-284
               

               
Cow position:
               
chr14:47200122-47200296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
134, 109
               

               
Conread position:
               
123-251
               

               
Cow position:
               
chr14:33758366-33758231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
123-296
               

               
Cow position:
               
chr14:48762386-48762193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
124-273
               

               
Cow position:
               
chr14:42153408-42153548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
124-275
               

               
Cow position:
               
chr14:8036320-8036179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
124-275
               

               
Cow position:
               
chr14:24880609-24880749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
124-296
               

               
Cow position:
               
chr14:11917153-11916993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
157, 66
               

               
Conread position:
               
124-299
               

               
Cow position:
               
chr14:38458590-38458426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
124-304
               

               
Cow position:
               
chr14:31893576-31893405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
157, 35
               

               
Conread position:
               
132-317
               

               
Cow position:
               
chr14:46965580-46965408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
137-271
               

               
Cow position:
               
chr14:6175235-6175102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 53
               
Show alignments to all cow chromosomes.