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Cow genome map

           
Conread name:
           
unkn-MI-P-A3-ade-a-01-1-UM.s1
        

               
Conread position:
               
16-296
               

               
Cow position:
               
chr27:31248594-31248868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
17-251
               

               
Cow position:
               
chr27:590735-590975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
18-282
               

               
Cow position:
               
chr27:26643711-26643457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
19-165
               

               
Cow position:
               
chr27:21976073-21975922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
19-176
               

               
Cow position:
               
chr27:1058655-1058817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
19-182
               

               
Cow position:
               
chr27:20497236-20497058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
19-183
               

               
Cow position:
               
chr27:22225571-22225741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
19-183
               

               
Cow position:
               
chr27:23882354-23882516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr27:29149261-29149423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr27:9169621-9169792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr27:12596789-12596623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr27:13252030-13251862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr27:19589500-19589319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr27:31148785-31148608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 165
               

               
Conread position:
               
19-190
               

               
Cow position:
               
chr27:14343442-14343605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chr27:8353498-8353321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chr27:18593293-18593114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chr27:26581412-26581594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr27:3306794-3306613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
19-202
               

               
Cow position:
               
chr27:10992381-10992187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
19-208
               

               
Cow position:
               
chr27:20037090-20037286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 151
               

               
Conread position:
               
19-211
               

               
Cow position:
               
chr27:536489-536286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chr27:4386037-4386242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chr27:31017810-31018006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr27:20085588-20085375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr27:22559800-22560005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr27:15215257-15215054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr27:17918291-17918497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr27:8942659-8942880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr27:15643195-15642987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr27:30988820-30988610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
19-227
               

               
Cow position:
               
chr27:22423534-22423331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
19-228
               

               
Cow position:
               
chr27:4156026-4155803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
19-243
               

               
Cow position:
               
chr27:22418743-22418962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:6541653-6541430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:7935134-7935363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:8062330-8062556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:19660959-19660723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
35, 189
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:19933089-19932861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
35, 91
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:20354608-20354395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:22454754-22454998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:22603200-22602970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:23107877-23108107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 176
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr27:30765060-30764828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chr27:23594346-23594113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chr27:27694747-27694981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr27:23735984-23735731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
19-281
               

               
Cow position:
               
chr27:20748983-20749247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
19-282
               

               
Cow position:
               
chr27:22171324-22171056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chr27:20795817-20795526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr27:14303758-14303503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr27:7615065-7615324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr27:18558383-18558108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr27:26509137-26509414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr27:31386614-31386885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr27:19546487-19546780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr27:26226266-26226546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chr27:16103832-16103551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chr27:16088833-16088527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr27:17331523-17331229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
19-304
               

               
Cow position:
               
chr27:31170041-31170340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
19-309
               

               
Cow position:
               
chr27:4720088-4720402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
19-323
               

               
Cow position:
               
chr27:16705276-16704963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
19-325
               

               
Cow position:
               
chr27:7412409-7412101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
20-192
               

               
Cow position:
               
chr27:17646144-17646326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr27:2847876-2847692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr27:1290828-1291022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
20-250
               

               
Cow position:
               
chr27:2644068-2644303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
20-251
               

               
Cow position:
               
chr27:23890962-23890727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
20-279
               

               
Cow position:
               
chr27:23452482-23452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 176
               

               
Conread position:
               
20-281
               

               
Cow position:
               
chr27:212987-212706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr27:27020081-27020343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
20-285
               

               
Cow position:
               
chr27:26087317-26087071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
233, 32
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chr27:21978116-21978401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
21-183
               

               
Cow position:
               
chr27:30354321-30354493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
21-209
               

               
Cow position:
               
chr27:10653708-10653511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
21-248
               

               
Cow position:
               
chr27:23860190-23859960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
21-249
               

               
Cow position:
               
chr27:29184816-29185049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 181
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr27:1768600-1768827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr27:26413231-26413483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 230
               

               
Conread position:
               
21-256
               

               
Cow position:
               
chr27:7974196-7973964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
21-280
               

               
Cow position:
               
chr27:15315527-15315279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
21-282
               

               
Cow position:
               
chr27:7649562-7649837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr27:20584435-20584714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr27:6925111-6924834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr27:22440162-22439886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
21-290
               

               
Cow position:
               
chr27:30872037-30872313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr27:6550479-6550206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr27:12516213-12515939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr27:15925363-15925091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr27:23511012-23510720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr27:28931772-28932057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chr27:26793766-26794042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr27:13254781-13255050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr27:15866238-15865967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 171
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr27:30868718-30869011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr27:30915029-30914745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
88, 175
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr27:11435300-11435589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
21-301
               

               
Cow position:
               
chr27:28921875-28922161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
21-308
               

               
Cow position:
               
chr27:27438486-27438775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
22-188
               

               
Cow position:
               
chr27:1636914-1637089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
22-194
               

               
Cow position:
               
chr27:28260516-28260696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr27:25152103-25151884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr27:28518316-28518088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr27:15378455-15378730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 166
               

               
Conread position:
               
22-291
               

               
Cow position:
               
chr27:10307281-10307556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
22-297
               

               
Cow position:
               
chr27:17397430-17397712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr27:20514842-20514561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
22-302
               

               
Cow position:
               
chr27:5553492-5553210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 178
               

               
Conread position:
               
23-250
               

               
Cow position:
               
chr27:24331741-24331509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
23-275
               

               
Cow position:
               
chr27:29593608-29593867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
23-284
               

               
Cow position:
               
chr27:11561796-11561527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
23-284
               

               
Cow position:
               
chr27:23632616-23632361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chr27:16965593-16965317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chr27:28290867-28290586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
23-295
               

               
Cow position:
               
chr27:28896900-28896617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
23-310
               

               
Cow position:
               
chr27:2592568-2592265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 192
               

               
Conread position:
               
24-194
               

               
Cow position:
               
chr27:1558637-1558807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
24-214
               

               
Cow position:
               
chr27:15343261-15343456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
24-216
               

               
Cow position:
               
chr27:27270519-27270724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr27:26111891-26112123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
24-251
               

               
Cow position:
               
chr27:26188848-26188621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr27:15867415-15867131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr27:27038820-27039016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
25-221
               

               
Cow position:
               
chr27:27064421-27064629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
25-250
               

               
Cow position:
               
chr27:29831680-29831913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr27:25809505-25809770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
25-296
               

               
Cow position:
               
chr27:15865629-15865348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
29, 178
               

               
Conread position:
               
25-298
               

               
Cow position:
               
chr27:20045903-20045638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
26-199
               

               
Cow position:
               
chr27:24371256-24371077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
28-284
               

               
Cow position:
               
chr27:20337116-20336839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
28-312
               

               
Cow position:
               
chr27:19509030-19508736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
29-188
               

               
Cow position:
               
chr27:25277155-25276989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
29-216
               

               
Cow position:
               
chr27:30359422-30359224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
29-284
               

               
Cow position:
               
chr27:2957419-2957168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
30-210
               

               
Cow position:
               
chr27:1789123-1789315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
30-294
               

               
Cow position:
               
chr27:11982635-11982904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 48
               

               
Conread position:
               
30-324
               

               
Cow position:
               
chr27:26437105-26437409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 171
               

               
Conread position:
               
31-188
               

               
Cow position:
               
chr27:24477428-24477263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr27:20812916-20812659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
38-209
               

               
Cow position:
               
chr27:27673016-27673191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
38-250
               

               
Cow position:
               
chr27:13317972-13318182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
45-275
               

               
Cow position:
               
chr27:17948257-17948036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
45-298
               

               
Cow position:
               
chr27:24303940-24303679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
48-298
               

               
Cow position:
               
chr27:11480643-11480899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
51-251
               

               
Cow position:
               
chr27:30489420-30489633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
58, 190
               

               
Conread position:
               
53-282
               

               
Cow position:
               
chr27:6241206-6241438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
54-250
               

               
Cow position:
               
chr27:29319398-29319201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
55-182
               

               
Cow position:
               
chr27:12191493-12191626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
56-188
               

               
Cow position:
               
chr27:22245611-22245473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr27:7731272-7731479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
56-283
               

               
Cow position:
               
chr27:18435148-18435377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
56-284
               

               
Cow position:
               
chr27:16512186-16512415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
56-291
               

               
Cow position:
               
chr27:23545345-23545594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
56-304
               

               
Cow position:
               
chr27:788812-789073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
56-316
               

               
Cow position:
               
chr27:8790755-8791021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
56-335
               

               
Cow position:
               
chr27:29991462-29991757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
57-197
               

               
Cow position:
               
chr27:23895404-23895261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
57-290
               

               
Cow position:
               
chr27:9977669-9977432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
63-295
               

               
Cow position:
               
chr27:23485187-23484958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
65-221
               

               
Cow position:
               
chr27:30908648-30908484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
69-291
               

               
Cow position:
               
chr27:22179797-22180021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
71-284
               

               
Cow position:
               
chr27:30617821-30618042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
78-251
               

               
Cow position:
               
chr27:6674242-6674062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
78-251
               

               
Cow position:
               
chr27:26323411-26323236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
78-278
               

               
Cow position:
               
chr27:19717878-19717656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 163
               

               
Conread position:
               
78-282
               

               
Cow position:
               
chr27:24223915-24223709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
78-298
               

               
Cow position:
               
chr27:19452965-19452752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
80-291
               

               
Cow position:
               
chr27:6106661-6106451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr27:29236511-29236300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
88-250
               

               
Cow position:
               
chr27:22268178-22268015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
90-284
               

               
Cow position:
               
chr27:13801760-13801557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
90-291
               

               
Cow position:
               
chr27:1184226-1184429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
90-294
               

               
Cow position:
               
chr27:31498730-31498527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
104-294
               

               
Cow position:
               
chr27:23495779-23495953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
111-283
               

               
Cow position:
               
chr27:21951055-21951227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
113, 126
               

               
Conread position:
               
114-275
               

               
Cow position:
               
chr27:20490451-20490285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
136, 76
               

               
Conread position:
               
114-286
               

               
Cow position:
               
chr27:30884948-30884778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
114-298
               

               
Cow position:
               
chr27:7847640-7847461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
114-301
               

               
Cow position:
               
chr27:15434245-15434069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
114-301
               

               
Cow position:
               
chr27:18491476-18491302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
186-288
               

               
Cow position:
               
chr27:1058967-1059068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.