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Cow genome map

           
Conread name:
           
unkn-MI-P-A3-ade-a-01-1-UM.s1
        

               
Conread position:
               
3-281
               

               
Cow position:
               
chr9:35832501-35832786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
19, 192
               

               
Conread position:
               
8-208
               

               
Cow position:
               
chr9:43342437-43342229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr9:34278951-34279234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr9:52407270-52406988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr9:31513837-31514107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
264, 178
               

               
Conread position:
               
13-177
               

               
Cow position:
               
chr9:13761205-13761029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
14-194
               

               
Cow position:
               
chr9:48100899-48100709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
17-275
               

               
Cow position:
               
chr9:56065655-56065400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 127
               

               
Conread position:
               
18-165
               

               
Cow position:
               
chr9:49709941-49709789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
18-181
               

               
Cow position:
               
chr9:63896639-63896467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
18-194
               

               
Cow position:
               
chr9:3343846-3343661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
18-216
               

               
Cow position:
               
chr9:5594599-5594396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 176
               

               
Conread position:
               
18-218
               

               
Cow position:
               
chr9:8534591-8534804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr9:30477678-30477947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr9:35167275-35166993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
18-290
               

               
Cow position:
               
chr9:34374832-34375109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
19-123
               

               
Cow position:
               
chr9:6225357-6225464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-148
               

               
Cow position:
               
chr9:41789381-41789243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
19-165
               

               
Cow position:
               
chr9:43937036-43936887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
19-177
               

               
Cow position:
               
chr9:39577829-39577669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
19-180
               

               
Cow position:
               
chr9:32371664-32371824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
19-181
               

               
Cow position:
               
chr9:41679842-41679673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
19-181
               

               
Cow position:
               
chr9:51557396-51557559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
19-182
               

               
Cow position:
               
chr9:24872932-24872761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
19-182
               

               
Cow position:
               
chr9:42298280-42298117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
19-183
               

               
Cow position:
               
chr9:3220233-3220060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr9:15225202-15225374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
19-186
               

               
Cow position:
               
chr9:4646232-4646403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr9:1867546-1867370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr9:10819736-10819909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr9:22461644-22461813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr9:55075037-55075209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr9:55321738-55321556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr9:62656898-62656722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
19-189
               

               
Cow position:
               
chr9:11299594-11299762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
19-190
               

               
Cow position:
               
chr9:6879869-6879696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chr9:5245958-5245769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr9:33697126-33696950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chr9:25400100-25400285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chr9:43443898-43443716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chr9:43871075-43870887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chr9:51720806-51720985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chr9:54681603-54681423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 161
               

               
Conread position:
               
19-198
               

               
Cow position:
               
chr9:32115509-32115690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
19-207
               

               
Cow position:
               
chr9:41781750-41781555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
19-207
               

               
Cow position:
               
chr9:64050464-64050662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
19-207
               

               
Cow position:
               
chr9:64559788-64559983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
19-208
               

               
Cow position:
               
chr9:52598627-52598824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
19-209
               

               
Cow position:
               
chr9:50139383-50139182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
19-212
               

               
Cow position:
               
chr9:54528608-54528407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr9:21888263-21888064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr9:36445725-36445510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr9:44467256-44467450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
19-219
               

               
Cow position:
               
chr9:17310466-17310673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr9:1520641-1520854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr9:1973038-1972833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr9:50543326-50543542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
19-222
               

               
Cow position:
               
chr9:55532911-55532698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
19-225
               

               
Cow position:
               
chr9:55889907-55889696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr9:33093049-33092839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
19-241
               

               
Cow position:
               
chr9:44770101-44770323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
19-241
               

               
Cow position:
               
chr9:64064260-64064493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chr9:18217003-18217244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:3070324-3070549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:5327352-5327130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:12225881-12226117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:20416412-20416646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:32307140-32307366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:33218853-33219089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:36843883-36843651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:38846247-38846473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr9:52513356-52513598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chr9:29194926-29195165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chr9:29339226-29339445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
19-252
               

               
Cow position:
               
chr9:9552189-9551957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
19-267
               

               
Cow position:
               
chr9:38645246-38645507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
19-270
               

               
Cow position:
               
chr9:41513720-41513485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
19-271
               

               
Cow position:
               
chr9:5836251-5835988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
19-272
               

               
Cow position:
               
chr9:56011595-56011349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 176
               

               
Conread position:
               
19-273
               

               
Cow position:
               
chr9:30124017-30123766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
19-273
               

               
Cow position:
               
chr9:42445883-42446150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 222
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr9:16300464-16300739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr9:43159838-43159589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
19-280
               

               
Cow position:
               
chr9:32676774-32676506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
19-280
               

               
Cow position:
               
chr9:33598077-33597802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
19-281
               

               
Cow position:
               
chr9:5393145-5392900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
19-282
               

               
Cow position:
               
chr9:1751434-1751156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
19-282
               

               
Cow position:
               
chr9:58979494-58979232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr9:41283110-41282838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr9:47906180-47906459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr9:50202666-50202380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr9:9443507-9443777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr9:9595858-9596125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr9:10144380-10144657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 178
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr9:13670733-13670461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr9:20579503-20579763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr9:31557631-31557897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr9:33114443-33114164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr9:60081002-60080717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chr9:5500954-5500688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chr9:47869105-47868848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
19-287
               

               
Cow position:
               
chr9:4262996-4263266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr9:1877911-1878177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr9:26310605-26310317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 256
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr9:28726624-28726908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr9:11168826-11168563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 175
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr9:19758805-19758534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr9:8998453-8998170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 199
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr9:33119789-33120060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr9:4580313-4580588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr9:19067881-19067583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr9:34902012-34902284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr9:36410261-36410534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
19-297
               

               
Cow position:
               
chr9:49764753-49764457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chr9:5433734-5433455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chr9:40215338-40215064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chr9:45728875-45728586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chr9:52839790-52840089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
19-300
               

               
Cow position:
               
chr9:45171122-45171415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr9:40005572-40005288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
19-309
               

               
Cow position:
               
chr9:8288714-8288416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 179
               

               
Conread position:
               
19-321
               

               
Cow position:
               
chr9:24997423-24997732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
19-327
               

               
Cow position:
               
chr9:6933977-6934297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
34, 179
               

               
Conread position:
               
20-176
               

               
Cow position:
               
chr9:40776893-40776729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
20-180
               

               
Cow position:
               
chr9:49417082-49416914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
20-185
               

               
Cow position:
               
chr9:3774256-3774087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
20-188
               

               
Cow position:
               
chr9:28354616-28354436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
20-191
               

               
Cow position:
               
chr9:6851973-6852151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr9:31078987-31079168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr9:40542214-40542047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
20-216
               

               
Cow position:
               
chr9:55084202-55084411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
20-217
               

               
Cow position:
               
chr9:17518395-17518602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
20-224
               

               
Cow position:
               
chr9:29840980-29840788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
20-250
               

               
Cow position:
               
chr9:7363120-7362871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
20-250
               

               
Cow position:
               
chr9:31347051-31346817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
20-250
               

               
Cow position:
               
chr9:39709940-39709721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
20-251
               

               
Cow position:
               
chr9:26279076-26279305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
20-281
               

               
Cow position:
               
chr9:16217069-16216806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 168
               

               
Conread position:
               
20-282
               

               
Cow position:
               
chr9:23541312-23541573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr9:9461560-9461842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
20-285
               

               
Cow position:
               
chr9:3387786-3387540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chr9:9503174-9503008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chr9:23797331-23797155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
21-193
               

               
Cow position:
               
chr9:50076152-50075978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
21-195
               

               
Cow position:
               
chr9:19493369-19493554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
21-197
               

               
Cow position:
               
chr9:22443533-22443717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr9:39681434-39681234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
21-217
               

               
Cow position:
               
chr9:11313417-11313615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
21-220
               

               
Cow position:
               
chr9:37677979-37677784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr9:11319539-11319749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr9:50080952-50081155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr9:10308914-10309118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
21-241
               

               
Cow position:
               
chr9:28391941-28392156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr9:9753299-9753535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr9:15805826-15806058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr9:27279403-27279174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr9:52267662-52267894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
21-251
               

               
Cow position:
               
chr9:26057347-26057563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr9:11123388-11123644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 190
               

               
Conread position:
               
21-280
               

               
Cow position:
               
chr9:38624530-38624795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr9:51620532-51620269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr9:8901129-8901414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr9:38941337-38941619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
21-293
               

               
Cow position:
               
chr9:5763537-5763842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chr9:32669853-32670131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr9:34410301-34410579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr9:35028072-35028350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr9:4267889-4268190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr9:9199686-9199959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr9:13743838-13744117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr9:28747428-28747704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr9:34286897-34286612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr9:48118601-48118865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chr9:20406730-20406469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
21-299
               

               
Cow position:
               
chr9:31359695-31359427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr9:9311955-9311679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 175
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr9:47445933-47446198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
21-307
               

               
Cow position:
               
chr9:52511209-52510917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
21-311
               

               
Cow position:
               
chr9:23788532-23788232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
21-316
               

               
Cow position:
               
chr9:19034434-19034151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
22-188
               

               
Cow position:
               
chr9:4630198-4630023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
22-191
               

               
Cow position:
               
chr9:5509817-5509641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr9:62668347-62668135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr9:5469956-5469737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr9:18252829-18253052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr9:33940698-33940464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 163
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr9:54716513-54716749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 214
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr9:61739019-61738789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr9:52754763-52754985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
22-268
               

               
Cow position:
               
chr9:11303986-11304240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr9:5342158-5342421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
22-291
               

               
Cow position:
               
chr9:26086157-26085875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
22-291
               

               
Cow position:
               
chr9:50310678-50310943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
22-294
               

               
Cow position:
               
chr9:23632566-23632849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
22-296
               

               
Cow position:
               
chr9:53762792-53762512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
22-300
               

               
Cow position:
               
chr9:54677341-54677066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
22-301
               

               
Cow position:
               
chr9:9723790-9724070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
22-301
               

               
Cow position:
               
chr9:37934142-37934431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
22-321
               

               
Cow position:
               
chr9:39011376-39011675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
23-188
               

               
Cow position:
               
chr9:26403877-26403704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
23-192
               

               
Cow position:
               
chr9:64637637-64637467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr9:17411099-17411293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
23-212
               

               
Cow position:
               
chr9:35105697-35105896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
23-228
               

               
Cow position:
               
chr9:19903173-19902960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
54, 50
               

               
Conread position:
               
23-250
               

               
Cow position:
               
chr9:55287799-55288021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
23-262
               

               
Cow position:
               
chr9:9815507-9815267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
23-279
               

               
Cow position:
               
chr9:51566402-51566668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
23-281
               

               
Cow position:
               
chr9:21383860-21384114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
23-294
               

               
Cow position:
               
chr9:26477309-26477025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
23-296
               

               
Cow position:
               
chr9:6840094-6839809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 192
               

               
Conread position:
               
23-296
               

               
Cow position:
               
chr9:44709917-44709645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
23-299
               

               
Cow position:
               
chr9:8834037-8834321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
24-188
               

               
Cow position:
               
chr9:42478390-42478563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
24-189
               

               
Cow position:
               
chr9:38289233-38289405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
24-216
               

               
Cow position:
               
chr9:58133927-58134114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
24-217
               

               
Cow position:
               
chr9:25921919-25921710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 199
               

               
Conread position:
               
24-221
               

               
Cow position:
               
chr9:22696313-22696108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
24-249
               

               
Cow position:
               
chr9:29185041-29185271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr9:15215594-15215822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr9:30402329-30402561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr9:37016988-37016768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
24-279
               

               
Cow position:
               
chr9:25583922-25583661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 157
               

               
Conread position:
               
24-295
               

               
Cow position:
               
chr9:8723888-8723609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr9:42062193-42061903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
24-300
               

               
Cow position:
               
chr9:26102815-26102544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
25-188
               

               
Cow position:
               
chr9:20322014-20322174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
25-250
               

               
Cow position:
               
chr9:5163893-5164120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr9:44396749-44396479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr9:58662329-58662062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
26-286
               

               
Cow position:
               
chr9:29819805-29819549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr9:56032229-56032491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
28-192
               

               
Cow position:
               
chr9:623436-623270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr9:34284038-34283786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
30-216
               

               
Cow position:
               
chr9:59386683-59386877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
30-250
               

               
Cow position:
               
chr9:33542142-33541920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 170
               

               
Conread position:
               
30-296
               

               
Cow position:
               
chr9:50382239-50382504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
33-279
               

               
Cow position:
               
chr9:9686331-9686588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
33-284
               

               
Cow position:
               
chr9:7805880-7806129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
34-216
               

               
Cow position:
               
chr9:8976339-8976515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
34-306
               

               
Cow position:
               
chr9:5110942-5110659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
38-295
               

               
Cow position:
               
chr9:40507521-40507781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
44-249
               

               
Cow position:
               
chr9:32955614-32955825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
45-242
               

               
Cow position:
               
chr9:1729605-1729801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
45-294
               

               
Cow position:
               
chr9:21460084-21460334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
45-296
               

               
Cow position:
               
chr9:12337973-12337714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
46-188
               

               
Cow position:
               
chr9:26859414-26859274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
46-286
               

               
Cow position:
               
chr9:47214478-47214722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
47-284
               

               
Cow position:
               
chr9:34024766-34024524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
48-286
               

               
Cow position:
               
chr9:24652469-24652233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
49-221
               

               
Cow position:
               
chr9:39758583-39758403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
49-291
               

               
Cow position:
               
chr9:45285470-45285720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 143
               

               
Conread position:
               
50-284
               

               
Cow position:
               
chr9:5756925-5757155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
50-294
               

               
Cow position:
               
chr9:34484658-34484408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
51-313
               

               
Cow position:
               
chr9:5104340-5104614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 150
               

               
Conread position:
               
53-228
               

               
Cow position:
               
chr9:39315908-39315733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
54-300
               

               
Cow position:
               
chr9:22433869-22434118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
55-249
               

               
Cow position:
               
chr9:52258008-52258197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
56-188
               

               
Cow position:
               
chr9:34888240-34888375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
56-188
               

               
Cow position:
               
chr9:58368939-58369077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
56-274
               

               
Cow position:
               
chr9:8562878-8562638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 184
               

               
Conread position:
               
56-281
               

               
Cow position:
               
chr9:33347432-33347653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
56-296
               

               
Cow position:
               
chr9:23970838-23971081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
56-298
               

               
Cow position:
               
chr9:2037488-2037247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
56-298
               

               
Cow position:
               
chr9:12786415-12786664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
56-306
               

               
Cow position:
               
chr9:8992121-8992377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
57-289
               

               
Cow position:
               
chr9:37069500-37069748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
57-324
               

               
Cow position:
               
chr9:52763703-52763964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
58-288
               

               
Cow position:
               
chr9:17740887-17741107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
59-250
               

               
Cow position:
               
chr9:9243594-9243412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
60-250
               

               
Cow position:
               
chr9:7859583-7859770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
60-296
               

               
Cow position:
               
chr9:14974865-14975113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
64-296
               

               
Cow position:
               
chr9:25375686-25375920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
65-294
               

               
Cow position:
               
chr9:38865934-38866157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
66-279
               

               
Cow position:
               
chr9:27345536-27345759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
44, 118
               

               
Conread position:
               
66-284
               

               
Cow position:
               
chr9:36458048-36457821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
66-285
               

               
Cow position:
               
chr9:11030232-11030008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 127
               

               
Conread position:
               
73-294
               

               
Cow position:
               
chr9:9091073-9091295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
179, 19
               

               
Conread position:
               
75-290
               

               
Cow position:
               
chr9:1884091-1884324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 160
               

               
Conread position:
               
77-221
               

               
Cow position:
               
chr9:24243684-24243838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
77-284
               

               
Cow position:
               
chr9:52807368-52807596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
78-235
               

               
Cow position:
               
chr9:60355176-60355345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
78-283
               

               
Cow position:
               
chr9:32089425-32089218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
78-283
               

               
Cow position:
               
chr9:34014213-34014440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 167
               

               
Conread position:
               
78-291
               

               
Cow position:
               
chr9:11098420-11098633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
78-294
               

               
Cow position:
               
chr9:55354647-55354414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
78-294
               

               
Cow position:
               
chr9:59699511-59699737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
80-283
               

               
Cow position:
               
chr9:54664887-54664674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
80-284
               

               
Cow position:
               
chr9:35306312-35306524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
80-309
               

               
Cow position:
               
chr9:44527140-44526908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
81-209
               

               
Cow position:
               
chr9:35793710-35793578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
81-251
               

               
Cow position:
               
chr9:49402684-49402515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
82-310
               

               
Cow position:
               
chr9:63134423-63134184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 171
               

               
Conread position:
               
84-250
               

               
Cow position:
               
chr9:34707282-34707442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
85-279
               

               
Cow position:
               
chr9:6118409-6118601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
85-285
               

               
Cow position:
               
chr9:61847102-61847291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
86-297
               

               
Cow position:
               
chr9:28315451-28315237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
87-298
               

               
Cow position:
               
chr9:53602246-53602034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
90-250
               

               
Cow position:
               
chr9:40603692-40603535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
90-295
               

               
Cow position:
               
chr9:54611301-54611503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
92-284
               

               
Cow position:
               
chr9:3847424-3847219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
92-291
               

               
Cow position:
               
chr9:20828924-20828721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 101
               

               
Conread position:
               
92-297
               

               
Cow position:
               
chr9:17855811-17855601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
95-295
               

               
Cow position:
               
chr9:8535879-8535673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
91, 135
               

               
Conread position:
               
101-284
               

               
Cow position:
               
chr9:22447285-22447469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
101-295
               

               
Cow position:
               
chr9:32858626-32858831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
101-347
               

               
Cow position:
               
chr9:33681668-33681406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 138
               

               
Conread position:
               
102-282
               

               
Cow position:
               
chr9:53323779-53323960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
104-250
               

               
Cow position:
               
chr9:8592424-8592562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr9:15389223-15389389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr9:34265089-34264896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 117
               

               
Conread position:
               
114-275
               

               
Cow position:
               
chr9:39957323-39957158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 69
               

               
Conread position:
               
114-279
               

               
Cow position:
               
chr9:5156094-5155932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
114-284
               

               
Cow position:
               
chr9:22375167-22374987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
114-285
               

               
Cow position:
               
chr9:23840401-23840581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr9:8645259-8645083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 76
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr9:33584692-33584873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
114-319
               

               
Cow position:
               
chr9:48900843-48901042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 71
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr9:8573383-8573204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
120-273
               

               
Cow position:
               
chr9:3410514-3410365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
121-296
               

               
Cow position:
               
chr9:29332334-29332518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 113
               

               
Conread position:
               
123-285
               

               
Cow position:
               
chr9:34910077-34910255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 113
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr9:3369978-3369818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
123-295
               

               
Cow position:
               
chr9:19656992-19657160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
124-275
               

               
Cow position:
               
chr9:11161312-11161172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
124-279
               

               
Cow position:
               
chr9:20525388-20525243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
124-298
               

               
Cow position:
               
chr9:8967917-8967754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
124-304
               

               
Cow position:
               
chr9:37062577-37062404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
157, 65
               

               
Conread position:
               
124-307
               

               
Cow position:
               
chr9:26683447-26683618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
125-250
               

               
Cow position:
               
chr9:43281642-43281511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
125-295
               

               
Cow position:
               
chr9:10316402-10316563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 64
               

               
Conread position:
               
126-298
               

               
Cow position:
               
chr9:35534018-35534193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
128-296
               

               
Cow position:
               
chr9:18008772-18008936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
133-274
               

               
Cow position:
               
chr9:33075349-33075492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 100
               
Show alignments to all cow chromosomes.