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Cow genome map

           
Conread name:
           
unkn-MI-P-A3-ade-a-01-1-UM.s1
        

               
Conread position:
               
8-281
               

               
Cow position:
               
chrX:35759991-35759708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 220
               

               
Conread position:
               
15-188
               

               
Cow position:
               
chrX:29553240-29553422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chrX:42893872-42894167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
17-190
               

               
Cow position:
               
chrX:10305392-10305212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chrX:19394509-19394796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 177
               

               
Conread position:
               
18-188
               

               
Cow position:
               
chrX:41123020-41123196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
18-194
               

               
Cow position:
               
chrX:19943279-19943092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
18-250
               

               
Cow position:
               
chrX:28866047-28865814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 180
               

               
Conread position:
               
18-283
               

               
Cow position:
               
chrX:22074752-22075027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 182
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chrX:16348610-16348320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
19-182
               

               
Cow position:
               
chrX:29115670-29115837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
19-182
               

               
Cow position:
               
chrX:35413580-35413741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
19-183
               

               
Cow position:
               
chrX:25788937-25788773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
19-184
               

               
Cow position:
               
chrX:1499624-1499799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
19-184
               

               
Cow position:
               
chrX:35288613-35288788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chrX:917406-917234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chrX:41068680-41068859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chrX:1514451-1514283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
53, 58
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chrX:1503295-1503464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chrX:10412027-10411847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chrX:17662634-17662461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chrX:33639932-33640112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chrX:41238394-41238218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-190
               

               
Cow position:
               
chrX:8797212-8797388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chrX:20584283-20584468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chrX:22915077-22914902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chrX:29121005-29121189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chrX:30543329-30543142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chrX:37119553-37119733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chrX:46072861-46072676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chrX:47481761-47481937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chrX:43567881-43568061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chrX:1616085-1615905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chrX:46429863-46429675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chrX:878424-878235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-197
               

               
Cow position:
               
chrX:27511386-27511575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
19-206
               

               
Cow position:
               
chrX:10959438-10959241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
19-208
               

               
Cow position:
               
chrX:17888460-17888265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-210
               

               
Cow position:
               
chrX:7718813-7718992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
168, 35
               

               
Conread position:
               
19-213
               

               
Cow position:
               
chrX:6260189-6259987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chrX:6690297-6690098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chrX:7710579-7710375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chrX:23091827-23092027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chrX:28134305-28134496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chrX:32978118-32977923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 41
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chrX:11085097-11084897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chrX:37910403-37910610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chrX:38227134-38226944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
19-217
               

               
Cow position:
               
chrX:42235569-42235358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chrX:9365716-9365505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chrX:43730263-43730057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
19-222
               

               
Cow position:
               
chrX:11717829-11717611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chrX:31311986-31312205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
19-228
               

               
Cow position:
               
chrX:6488539-6488755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
19-228
               

               
Cow position:
               
chrX:11082665-11082449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
19-228
               

               
Cow position:
               
chrX:14973781-14973567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
19-241
               

               
Cow position:
               
chrX:4043901-4043675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
19-243
               

               
Cow position:
               
chrX:35542854-35543067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chrX:16416467-16416687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chrX:15820556-15820797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 58
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chrX:21593247-21593482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chrX:23514056-23513817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chrX:27228087-27228319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chrX:29601871-29601639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 178
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chrX:39220038-39220276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chrX:44396977-44397201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chrX:13382289-13382533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
19-251
               

               
Cow position:
               
chrX:13647826-13647593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
19-265
               

               
Cow position:
               
chrX:31252377-31252613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
19-265
               

               
Cow position:
               
chrX:34502881-34503133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 178
               

               
Conread position:
               
19-271
               

               
Cow position:
               
chrX:18694965-18694702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chrX:31627022-31626741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 232
               

               
Conread position:
               
19-277
               

               
Cow position:
               
chrX:41271038-41270752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 263
               

               
Conread position:
               
19-279
               

               
Cow position:
               
chrX:161372-161628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
19-279
               

               
Cow position:
               
chrX:38964064-38964325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 183
               

               
Conread position:
               
19-279
               

               
Cow position:
               
chrX:42381143-42380884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
19-280
               

               
Cow position:
               
chrX:15007190-15006930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
19-280
               

               
Cow position:
               
chrX:38549406-38549676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 192
               

               
Conread position:
               
19-281
               

               
Cow position:
               
chrX:9252203-9251933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
19-282
               

               
Cow position:
               
chrX:26881609-26881331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chrX:34792349-34792091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chrX:126728-126998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 200
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chrX:22393027-22392754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 167
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chrX:25036946-25037225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chrX:38654473-38654199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chrX:38853156-38853444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chrX:40035484-40035209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chrX:29680301-29680013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chrX:42247227-42246947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chrX:11614659-11614914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
97, 111
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chrX:15147228-15146959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chrX:44961708-44961995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chrX:45968111-45968377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chrX:7721948-7722216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chrX:40108557-40108270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chrX:35985777-35986058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 157
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chrX:36356072-36356347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chrX:45598642-45598364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
88, 172
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chrX:45875352-45875636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 160
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chrX:34411801-34412091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
19-297
               

               
Cow position:
               
chrX:11656051-11656325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chrX:23561820-23562115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chrX:41027115-41027404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chrX:42492558-42492271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
19-299
               

               
Cow position:
               
chrX:22387283-22387000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chrX:5017455-5017166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chrX:29050206-29050489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chrX:32820989-32821281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
37, 219
               

               
Conread position:
               
19-304
               

               
Cow position:
               
chrX:34565240-34565527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
19-305
               

               
Cow position:
               
chrX:27431955-27431669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
20-149
               

               
Cow position:
               
chrX:26440818-26440687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
20-186
               

               
Cow position:
               
chrX:23940072-23939914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
20-251
               

               
Cow position:
               
chrX:31436436-31436660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 172
               

               
Conread position:
               
20-252
               

               
Cow position:
               
chrX:47186361-47186134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
20-279
               

               
Cow position:
               
chrX:9201510-9201771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
20-279
               

               
Cow position:
               
chrX:40532084-40531798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 226
               

               
Conread position:
               
20-280
               

               
Cow position:
               
chrX:18964865-18964605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
20-282
               

               
Cow position:
               
chrX:4109150-4109416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
20-286
               

               
Cow position:
               
chrX:38094561-38094291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chrX:11633640-11633927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
33, 181
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chrX:12095813-12095528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
20-295
               

               
Cow position:
               
chrX:296355-296634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
20-296
               

               
Cow position:
               
chrX:24331739-24332017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
20-296
               

               
Cow position:
               
chrX:25441570-25441314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
20-296
               

               
Cow position:
               
chrX:27446656-27446929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chrX:24749047-24749323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
20-300
               

               
Cow position:
               
chrX:40685371-40685091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 177
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chrX:29289540-29289715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chrX:36514933-36514755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chrX:46433453-46433628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
21-191
               

               
Cow position:
               
chrX:27772000-27771828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
21-192
               

               
Cow position:
               
chrX:8925662-8925840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
21-194
               

               
Cow position:
               
chrX:5900430-5900606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
21-213
               

               
Cow position:
               
chrX:14599494-14599695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
21-213
               

               
Cow position:
               
chrX:43527471-43527670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chrX:37836550-37836747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
21-240
               

               
Cow position:
               
chrX:23113237-23113463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
21-243
               

               
Cow position:
               
chrX:4279156-4278935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
21-247
               

               
Cow position:
               
chrX:12309424-12309198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chrX:169584-169351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
33, 177
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chrX:10516211-10516444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 181
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chrX:25035418-25035191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chrX:35885766-35885542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chrX:36975911-36976142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chrX:44339363-44339130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 171
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chrX:47046545-47046323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
21-251
               

               
Cow position:
               
chrX:10831532-10831290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
21-251
               

               
Cow position:
               
chrX:22822012-22822246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
21-279
               

               
Cow position:
               
chrX:44054768-44055031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
21-280
               

               
Cow position:
               
chrX:9425779-9425533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
21-280
               

               
Cow position:
               
chrX:18204500-18204237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chrX:31442870-31442606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chrX:40283087-40283343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
21-285
               

               
Cow position:
               
chrX:30420976-30420733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
21-286
               

               
Cow position:
               
chrX:33654876-33654607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chrX:4768702-4768954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chrX:6541775-6541497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chrX:6559484-6559216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chrX:24365864-24365581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chrX:34441490-34441212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chrX:7351262-7351544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chrX:12290683-12290962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chrX:27509062-27508781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chrX:36866132-36866418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chrX:26492968-26493251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chrX:30133359-30133075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 161
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chrX:7648440-7648168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chrX:4632890-4632600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chrX:7178859-7179135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chrX:41674071-41674352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
21-310
               

               
Cow position:
               
chrX:16575084-16575360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chrX:46587781-46588097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
33, 222
               

               
Conread position:
               
22-189
               

               
Cow position:
               
chrX:20881977-20881806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
22-200
               

               
Cow position:
               
chrX:43426254-43426443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
22-236
               

               
Cow position:
               
chrX:6463573-6463785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
22-275
               

               
Cow position:
               
chrX:9635223-9634968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
22-275
               

               
Cow position:
               
chrX:41526561-41526310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
22-279
               

               
Cow position:
               
chrX:34532481-34532739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 169
               

               
Conread position:
               
22-279
               

               
Cow position:
               
chrX:37489685-37489957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
22-281
               

               
Cow position:
               
chrX:27394060-27393788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chrX:6599822-6599541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chrX:42855415-42855696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
22-291
               

               
Cow position:
               
chrX:34315478-34315771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
22-291
               

               
Cow position:
               
chrX:48558709-48558984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 186
               

               
Conread position:
               
22-305
               

               
Cow position:
               
chrX:151867-152159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
23-181
               

               
Cow position:
               
chrX:19690181-19690345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chrX:29194196-29194364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chrX:31515131-31515308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
23-215
               

               
Cow position:
               
chrX:6278537-6278333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
23-250
               

               
Cow position:
               
chrX:6407507-6407734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
23-250
               

               
Cow position:
               
chrX:13868666-13868894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
23-250
               

               
Cow position:
               
chrX:31294600-31294379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
23-250
               

               
Cow position:
               
chrX:34543743-34543975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 182
               

               
Conread position:
               
23-251
               

               
Cow position:
               
chrX:34238678-34238914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 182
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chrX:16762732-16763005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 187
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chrX:22115353-22115075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
23-295
               

               
Cow position:
               
chrX:25815945-25815654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
23-296
               

               
Cow position:
               
chrX:40480905-40480603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
23-298
               

               
Cow position:
               
chrX:21327869-21328155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
23-298
               

               
Cow position:
               
chrX:34222677-34222946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
23-300
               

               
Cow position:
               
chrX:27261151-27261436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
24-216
               

               
Cow position:
               
chrX:3130537-3130736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
24-217
               

               
Cow position:
               
chrX:29549583-29549385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chrX:4645948-4645724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chrX:23188813-23188599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chrX:28878205-28877976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
24-277
               

               
Cow position:
               
chrX:46532537-46532264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 187
               

               
Conread position:
               
24-284
               

               
Cow position:
               
chrX:20339925-20339662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chrX:27705551-27705828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chrX:41878968-41878696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
24-294
               

               
Cow position:
               
chrX:7277877-7278151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
24-294
               

               
Cow position:
               
chrX:40680575-40680853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
24-298
               

               
Cow position:
               
chrX:31489484-31489765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
24-316
               

               
Cow position:
               
chrX:28940210-28940511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
25-193
               

               
Cow position:
               
chrX:11073228-11073049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
25-221
               

               
Cow position:
               
chrX:23562598-23562804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
25-258
               

               
Cow position:
               
chrX:5872284-5872531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
85, 216
               

               
Conread position:
               
25-283
               

               
Cow position:
               
chrX:17956660-17956921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
73, 108
               

               
Conread position:
               
25-288
               

               
Cow position:
               
chrX:27075085-27074814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chrX:5063217-5063484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
27-221
               

               
Cow position:
               
chrX:37129234-37129440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
27-275
               

               
Cow position:
               
chrX:38642216-38642466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
28-284
               

               
Cow position:
               
chrX:7695718-7695997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 160
               

               
Conread position:
               
29-250
               

               
Cow position:
               
chrX:30840508-30840731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chrX:5679599-5679353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 190
               

               
Conread position:
               
29-284
               

               
Cow position:
               
chrX:35268834-35269089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
29-324
               

               
Cow position:
               
chrX:23498709-23498389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
33-221
               

               
Cow position:
               
chrX:20743575-20743774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
38-188
               

               
Cow position:
               
chrX:42873368-42873522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
38-291
               

               
Cow position:
               
chrX:38967871-38968139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
39-281
               

               
Cow position:
               
chrX:25411886-25412149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
39-295
               

               
Cow position:
               
chrX:28923023-28923258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
39-298
               

               
Cow position:
               
chrX:17966322-17966567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 154
               

               
Conread position:
               
39-304
               

               
Cow position:
               
chrX:27668977-27668715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 180
               

               
Conread position:
               
40-291
               

               
Cow position:
               
chrX:42836164-42836416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
43-216
               

               
Cow position:
               
chrX:23785631-23785814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
44-298
               

               
Cow position:
               
chrX:33466616-33466864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
45-251
               

               
Cow position:
               
chrX:6267658-6267861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
45-253
               

               
Cow position:
               
chrX:18046388-18046598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
46-289
               

               
Cow position:
               
chrX:20678148-20677904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
47-294
               

               
Cow position:
               
chrX:24633673-24633929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
48-290
               

               
Cow position:
               
chrX:3806672-3806917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
48-291
               

               
Cow position:
               
chrX:40336902-40337151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
50-285
               

               
Cow position:
               
chrX:32910096-32910331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
51-250
               

               
Cow position:
               
chrX:23335979-23335785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
53-185
               

               
Cow position:
               
chrX:16830219-16830354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
53-311
               

               
Cow position:
               
chrX:38218709-38218974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
54-296
               

               
Cow position:
               
chrX:39180237-39180000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
55-244
               

               
Cow position:
               
chrX:5679922-5679746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
55-322
               

               
Cow position:
               
chrX:16984638-16984906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
56-185
               

               
Cow position:
               
chrX:20151858-20151990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
56-209
               

               
Cow position:
               
chrX:29478722-29478882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
56-216
               

               
Cow position:
               
chrX:42506229-42506073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
56-284
               

               
Cow position:
               
chrX:31829463-31829210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
56-298
               

               
Cow position:
               
chrX:35275984-35276235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
56-320
               

               
Cow position:
               
chrX:13121936-13122212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
56-330
               

               
Cow position:
               
chrX:26205450-26205180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 112
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chrX:42450015-42449769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
58-270
               

               
Cow position:
               
chrX:14986151-14985943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
59-316
               

               
Cow position:
               
chrX:37955848-37956112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 138
               

               
Conread position:
               
60-290
               

               
Cow position:
               
chrX:24170727-24170484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
62-195
               

               
Cow position:
               
chrX:3860624-3860493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
62-250
               

               
Cow position:
               
chrX:1122539-1122356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
63-193
               

               
Cow position:
               
chrX:1337274-1337149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
63-284
               

               
Cow position:
               
chrX:17524379-17524150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chrX:4559744-4559981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
64-251
               

               
Cow position:
               
chrX:2206585-2206399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
64-253
               

               
Cow position:
               
chrX:27175009-27175192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 128
               

               
Conread position:
               
64-284
               

               
Cow position:
               
chrX:19018825-19018595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
64-289
               

               
Cow position:
               
chrX:38301815-38302052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
64-291
               

               
Cow position:
               
chrX:35658806-35659034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
66-211
               

               
Cow position:
               
chrX:25459726-25459569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
66-284
               

               
Cow position:
               
chrX:16324006-16323782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
66-296
               

               
Cow position:
               
chrX:35285181-35285416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
73-278
               

               
Cow position:
               
chrX:26692236-26692438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
78-279
               

               
Cow position:
               
chrX:753172-753390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 167
               

               
Conread position:
               
78-282
               

               
Cow position:
               
chrX:23098184-23097987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
78-284
               

               
Cow position:
               
chrX:27667453-27667673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
78-291
               

               
Cow position:
               
chrX:31479991-31480201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
78-298
               

               
Cow position:
               
chrX:23266435-23266669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 201
               

               
Conread position:
               
78-299
               

               
Cow position:
               
chrX:20957258-20957484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
79-275
               

               
Cow position:
               
chrX:35383015-35382818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
80-229
               

               
Cow position:
               
chrX:40355057-40355206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
80-282
               

               
Cow position:
               
chrX:32877353-32877148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
82-291
               

               
Cow position:
               
chrX:37062561-37062326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 162
               

               
Conread position:
               
84-291
               

               
Cow position:
               
chrX:23359085-23358878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
86-295
               

               
Cow position:
               
chrX:46909843-46910053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
87-250
               

               
Cow position:
               
chrX:2314590-2314428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
88-284
               

               
Cow position:
               
chrX:8326934-8327138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
89-296
               

               
Cow position:
               
chrX:42311704-42311897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
90-285
               

               
Cow position:
               
chrX:40648932-40649136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 114
               

               
Conread position:
               
98-250
               

               
Cow position:
               
chrX:11653817-11653957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
101-251
               

               
Cow position:
               
chrX:40046528-40046378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
104-275
               

               
Cow position:
               
chrX:44754327-44754162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
104-279
               

               
Cow position:
               
chrX:41991081-41990895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
83, 126
               

               
Conread position:
               
104-282
               

               
Cow position:
               
chrX:27270428-27270600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
104-288
               

               
Cow position:
               
chrX:31373589-31373786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
106-284
               

               
Cow position:
               
chrX:23182928-23182734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
110-290
               

               
Cow position:
               
chrX:44759881-44759700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
110-294
               

               
Cow position:
               
chrX:41215381-41215569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 79
               

               
Conread position:
               
111-221
               

               
Cow position:
               
chrX:16481510-16481399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
114-250
               

               
Cow position:
               
chrX:7336904-7337033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
114-253
               

               
Cow position:
               
chrX:34270624-34270754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
114-280
               

               
Cow position:
               
chrX:11589304-11589138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
138, 76
               

               
Conread position:
               
114-281
               

               
Cow position:
               
chrX:6480533-6480365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
139, 76
               

               
Conread position:
               
114-286
               

               
Cow position:
               
chrX:20583729-20583895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
114-290
               

               
Cow position:
               
chrX:23485584-23485768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
114-292
               

               
Cow position:
               
chrX:11602420-11602245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
114-294
               

               
Cow position:
               
chrX:42086890-42087070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
139, 76
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chrX:4444484-4444671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
114-297
               

               
Cow position:
               
chrX:6907346-6907173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
114-298
               

               
Cow position:
               
chrX:231955-231777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
114-298
               

               
Cow position:
               
chrX:42875275-42875456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
114-304
               

               
Cow position:
               
chrX:43014610-43014405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
114-323
               

               
Cow position:
               
chrX:31983522-31983307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
116-295
               

               
Cow position:
               
chrX:46079150-46079332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
120-296
               

               
Cow position:
               
chrX:44816745-44816582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
161, 70
               

               
Conread position:
               
124-291
               

               
Cow position:
               
chrX:37141096-37140927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
124-296
               

               
Cow position:
               
chrX:30042018-30041853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
157, 65
               

               
Conread position:
               
124-298
               

               
Cow position:
               
chrX:21288535-21288367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
124-328
               

               
Cow position:
               
chrX:6274273-6274076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
125-295
               

               
Cow position:
               
chrX:40056143-40055983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
125-298
               

               
Cow position:
               
chrX:36961790-36961958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
151, 65
               

               
Conread position:
               
132-296
               

               
Cow position:
               
chrX:21171-21327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
151, 43
               
Show alignments to all cow chromosomes.