Cow genome map
| Conread name: | unkn-MI-P-NA-aeg-d-01-1-UM.s1.ab1 |
| Conread position: | 1-561 |
| Cow position: | chr10:38545554-38546131 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 180 |
| Conread position: | 5-550 |
| Cow position: | chr10:42629292-42628730 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 173 |
| Conread position: | 10-537 |
| Cow position: | chr10:31524443-31523919 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 168 |
| Conread position: | 98-466 |
| Cow position: | chr10:54978915-54979280 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 151-385 |
| Cow position: | chr10:8339407-8339168 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 227-565 |
| Cow position: | chr10:33347029-33346692 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 229-414 |
| Cow position: | chr10:28931383-28931570 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 160 |
| Conread position: | 229-518 |
| Cow position: | chr10:60192556-60192270 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 229-564 |
| Cow position: | chr10:38847771-38847451 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 237-405 |
| Cow position: | chr10:60490014-60489846 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 237-564 |
| Cow position: | chr10:10415806-10415494 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 55 |
| Conread position: | 237-565 |
| Cow position: | chr10:49310907-49310597 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 206 |
| Conread position: | 238-564 |
| Cow position: | chr10:8327855-8328180 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 238-564 |
| Cow position: | chr10:24298439-24298761 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 153 |
| Conread position: | 244-565 |
| Cow position: | chr10:20371565-20371880 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 248-553 |
| Cow position: | chr10:44295243-44294935 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 248-558 |
| Cow position: | chr10:31537665-31537365 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 185, 31 |
| Conread position: | 278-431 |
| Cow position: | chr10:42679754-42679599 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 293-564 |
| Cow position: | chr10:25498719-25498445 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 317-536 |
| Cow position: | chr10:53364298-53364084 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 318-563 |
| Cow position: | chr10:24977800-24978042 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 129, 124 |
| Conread position: | 319-455 |
| Cow position: | chr10:56065011-56064875 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-476 |
| Cow position: | chr10:19496977-19497135 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 319-534 |
| Cow position: | chr10:19802891-19802679 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 147, 160 |
| Conread position: | 319-565 |
| Cow position: | chr10:19758686-19758443 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 160 |
| Conread position: | 320-423 |
| Cow position: | chr10:24061469-24061572 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-564 |
| Cow position: | chr10:39853673-39853921 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 320-564 |
| Cow position: | chr10:62778685-62778440 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 322-564 |
| Cow position: | chr10:29696566-29696329 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 322-564 |
| Cow position: | chr10:34686229-34685986 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 330-437 |
| Cow position: | chr10:68598966-68599073 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-557 |
| Cow position: | chr10:10477813-10478041 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 334-563 |
| Cow position: | chr10:40152131-40152360 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 176 |
Show alignments to all cow chromosomes.