Cow genome map
| Conread name: | unkn-MI-P-NA-aeg-d-01-1-UM.s1.ab1 |
| Conread position: | 12-559 |
| Cow position: | chr11:10090644-10090070 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 31 |
| Conread position: | 18-501 |
| Cow position: | chr11:7317149-7316667 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 141-562 |
| Cow position: | chr11:8283226-8282810 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 186-361 |
| Cow position: | chr11:30124926-30125105 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 237-565 |
| Cow position: | chr11:42429394-42429065 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 250 |
| Conread position: | 243-425 |
| Cow position: | chr11:10050764-10050582 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 163 |
| Conread position: | 264-564 |
| Cow position: | chr11:29233634-29233926 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 266-532 |
| Cow position: | chr11:4065199-4065471 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 223 |
| Conread position: | 278-560 |
| Cow position: | chr11:17220198-17220486 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 283-564 |
| Cow position: | chr11:34020905-34020619 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 312-563 |
| Cow position: | chr11:12351081-12351333 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 319-563 |
| Cow position: | chr11:9606602-9606845 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 74 |
| Conread position: | 319-564 |
| Cow position: | chr11:25527534-25527291 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 164 |
| Conread position: | 319-565 |
| Cow position: | chr11:73477284-73477038 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-434 |
| Cow position: | chr11:8267567-8267681 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-561 |
| Cow position: | chr11:37491671-37491915 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 68 |
| Conread position: | 320-562 |
| Cow position: | chr11:21467052-21466810 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 158 |
| Conread position: | 320-564 |
| Cow position: | chr11:8887183-8887425 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 322-553 |
| Cow position: | chr11:37065145-37065379 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 322-562 |
| Cow position: | chr11:9659414-9659666 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 323-446 |
| Cow position: | chr11:59369580-59369457 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-511 |
| Cow position: | chr11:9220147-9220336 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 323-558 |
| Cow position: | chr11:28063648-28063418 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 335-564 |
| Cow position: | chr11:7113554-7113326 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 150, 101 |
| Conread position: | 342-517 |
| Cow position: | chr11:77235668-77235493 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 134, 143 |
Show alignments to all cow chromosomes.