Cow genome map
| Conread name: | unkn-MI-P-NA-aeg-d-01-1-UM.s1.ab1 |
| Conread position: | 1-557 |
| Cow position: | chr21:2540637-2541214 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 240 |
| Conread position: | 1-565 |
| Cow position: | chr21:4184276-4183717 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 110 |
| Conread position: | 4-522 |
| Cow position: | chr21:9870505-9869985 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 352 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 126, 42 |
| Conread position: | 5-500 |
| Cow position: | chr21:359804-359291 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 83 |
| Conread position: | 30-419 |
| Cow position: | chr21:29512-29107 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 110-563 |
| Cow position: | chr21:23812527-23812069 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 143-519 |
| Cow position: | chr21:30226629-30226257 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 249-563 |
| Cow position: | chr21:2416726-2416422 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 252-561 |
| Cow position: | chr21:2502400-2502088 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 299-561 |
| Cow position: | chr21:18819970-18820232 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 312-565 |
| Cow position: | chr21:4589546-4589799 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 318-476 |
| Cow position: | chr21:2674174-2674330 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 319-564 |
| Cow position: | chr21:4077275-4077032 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 319-565 |
| Cow position: | chr21:11453218-11453464 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-565 |
| Cow position: | chr21:26650479-26650233 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-493 |
| Cow position: | chr21:34258552-34258726 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 320-564 |
| Cow position: | chr21:2529691-2529934 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 101 |
| Conread position: | 320-564 |
| Cow position: | chr21:3797934-3798178 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-564 |
| Cow position: | chr21:4457263-4457019 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-564 |
| Cow position: | chr21:34293452-34293209 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 320-565 |
| Cow position: | chr21:13123569-13123812 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 325-464 |
| Cow position: | chr21:2716286-2716425 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-565 |
| Cow position: | chr21:6339998-6339758 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 330-541 |
| Cow position: | chr21:3615738-3615538 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 330-564 |
| Cow position: | chr21:2788566-2788800 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 84 |
Show alignments to all cow chromosomes.