Cow genome map

Conread name: unkn-MI-P-NA-aeg-d-01-1-UM.s1.ab1

Conread position: 1-376
Cow position: chr28:5764876-5764499 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 149, 29

Conread position: 1-521
Cow position: chr28:5813326-5812799 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 11-390
Cow position: chr28:7817773-7817377 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 269
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 90, 15

Conread position: 12-385
Cow position: chr28:10497714-10498084 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 80

Conread position: 17-525
Cow position: chr28:10071586-10071088 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 76

Conread position: 17-563
Cow position: chr28:21359638-21359067 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 43-560
Cow position: chr28:5798034-5797501 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 59

Conread position: 139-561
Cow position: chr28:7789795-7790219 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 139-563
Cow position: chr28:2989211-2989651 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 199-561
Cow position: chr28:10618694-10619042 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 229-558
Cow position: chr28:10462750-10463082 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 229-562
Cow position: chr28:2845780-2846106 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 88

Conread position: 237-538
Cow position: chr28:34649335-34649034 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 89

Conread position: 237-563
Cow position: chr28:17312316-17312010 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 263, 63

Conread position: 243-434
Cow position: chr28:11357330-11357519 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 52, 30

Conread position: 283-466
Cow position: chr28:24652768-24652952 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 176

Conread position: 292-526
Cow position: chr28:22233057-22233295 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 154

Conread position: 298-565
Cow position: chr28:24587764-24587498 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 21

Conread position: 319-496
Cow position: chr28:30805378-30805555 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 319-518
Cow position: chr28:13490460-13490261 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 319-564
Cow position: chr28:17324035-17324286 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 91

Conread position: 319-565
Cow position: chr28:9154976-9155216 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 320-564
Cow position: chr28:4380536-4380780 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 320-564
Cow position: chr28:9954441-9954197 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 320-565
Cow position: chr28:2592223-2591978 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 330-564
Cow position: chr28:7901660-7901419 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 334-563
Cow position: chr28:1387106-1387329 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 0

Show alignments to all cow chromosomes.