Cow genome map
Conread name: | unkn-MI-P-NA-aeg-d-01-1-UM.s1.ab1 |
Conread position: | 4-183 |
Cow position: | chr3:5391588-5391407 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 83 |
Conread position: | 12-351 |
Cow position: | chr3:66991280-66990924 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 244 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 69, 166 |
Conread position: | 12-563 |
Cow position: | chr3:52863948-52864524 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 89 |
Conread position: | 135-560 |
Cow position: | chr3:29595575-29595149 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 25 |
Conread position: | 139-509 |
Cow position: | chr3:63004366-63004730 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 23 |
Conread position: | 139-562 |
Cow position: | chr3:64357794-64358217 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 30 |
Conread position: | 139-563 |
Cow position: | chr3:48230632-48231054 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 23 |
Conread position: | 150-565 |
Cow position: | chr3:6685815-6685407 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 12 |
Conread position: | 186-492 |
Cow position: | chr3:14632376-14632678 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 186-564 |
Cow position: | chr3:19802975-19802608 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 0 |
Conread position: | 200-561 |
Cow position: | chr3:2908055-2908405 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 131 |
Conread position: | 213-563 |
Cow position: | chr3:39327015-39326665 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 34 |
Conread position: | 229-564 |
Cow position: | chr3:14754015-14754349 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 89 |
Conread position: | 229-564 |
Cow position: | chr3:45774815-45775140 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 0 |
Conread position: | 229-565 |
Cow position: | chr3:4027557-4027218 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 230-563 |
Cow position: | chr3:3980670-3980338 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 243 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 29, 11 |
Conread position: | 236-506 |
Cow position: | chr3:26837484-26837756 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 96 |
Conread position: | 237-564 |
Cow position: | chr3:42579691-42580019 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 13 |
Conread position: | 259-500 |
Cow position: | chr3:32842197-32842436 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 173 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 200, 39 |
Conread position: | 278-423 |
Cow position: | chr3:63241542-63241688 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 118 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 282-564 |
Cow position: | chr3:15178538-15178262 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 206 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 132, 17 |
Conread position: | 283-564 |
Cow position: | chr3:45868985-45869269 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 114 |
Conread position: | 285-565 |
Cow position: | chr3:36864132-36864412 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 31 |
Conread position: | 286-559 |
Cow position: | chr3:3054821-3054551 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 290-559 |
Cow position: | chr3:49678009-49677740 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 224 |
Conread position: | 290-564 |
Cow position: | chr3:26949736-26949459 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 194 |
Conread position: | 302-562 |
Cow position: | chr3:77423882-77423631 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 302-563 |
Cow position: | chr3:58947665-58947407 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 305-564 |
Cow position: | chr3:42432444-42432179 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 191 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 320-553 |
Cow position: | chr3:206969-207202 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 320-562 |
Cow position: | chr3:2634112-2633875 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 320-563 |
Cow position: | chr3:45895366-45895609 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 179 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 320-563 |
Cow position: | chr3:45974689-45974446 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 179 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 320-564 |
Cow position: | chr3:472724-472480 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 320-564 |
Cow position: | chr3:2654294-2654054 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 65 |
Conread position: | 320-564 |
Cow position: | chr3:31897785-31898029 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 320-564 |
Cow position: | chr3:66638932-66638688 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 320-564 |
Cow position: | chr3:77474954-77474708 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 320-565 |
Cow position: | chr3:31354073-31354318 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 322-564 |
Cow position: | chr3:5829439-5829680 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 333-565 |
Cow position: | chr3:64650805-64650572 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.