Cow genome map
| Conread name: | unkn-MI-P-NA-aeg-d-01-1-UM.s1.ab1 |
| Conread position: | 1-564 |
| Cow position: | chr7:51014595-51014033 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 1-565 |
| Cow position: | chr7:21310831-21310287 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 5-553 |
| Cow position: | chr7:39107595-39108149 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 22-493 |
| Cow position: | chr7:53991375-53990902 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 39 |
| Conread position: | 135-565 |
| Cow position: | chr7:29470631-29470201 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 138-564 |
| Cow position: | chr7:68777655-68778075 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 139-457 |
| Cow position: | chr7:54195759-54196071 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 143-564 |
| Cow position: | chr7:35287060-35287481 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 154-550 |
| Cow position: | chr7:24934476-24934873 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 179-562 |
| Cow position: | chr7:68857659-68858034 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 93 |
| Conread position: | 229-401 |
| Cow position: | chr7:6488923-6489096 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 229-558 |
| Cow position: | chr7:58377800-58378125 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 229-564 |
| Cow position: | chr7:1399949-1400281 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 229-564 |
| Cow position: | chr7:39555681-39556016 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 229-564 |
| Cow position: | chr7:47051098-47050767 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 275 |
| Conread position: | 237-564 |
| Cow position: | chr7:63021246-63020927 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 237-564 |
| Cow position: | chr7:63550296-63550611 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 248-564 |
| Cow position: | chr7:3730370-3730058 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 248-565 |
| Cow position: | chr7:58993585-58993277 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 254-449 |
| Cow position: | chr7:1735130-1735332 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 272-563 |
| Cow position: | chr7:68479540-68479247 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 283-563 |
| Cow position: | chr7:23836473-23836193 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 309-563 |
| Cow position: | chr7:68908161-68907910 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 318-564 |
| Cow position: | chr7:994555-994314 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 319-564 |
| Cow position: | chr7:43830701-43830946 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-565 |
| Cow position: | chr7:23815646-23815892 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-565 |
| Cow position: | chr7:61559537-61559291 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-553 |
| Cow position: | chr7:68232263-68232030 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-563 |
| Cow position: | chr7:21127340-21127582 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 320-563 |
| Cow position: | chr7:63385663-63385419 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 320-564 |
| Cow position: | chr7:21975424-21975658 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 320-564 |
| Cow position: | chr7:41490432-41490190 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 323-559 |
| Cow position: | chr7:68076746-68076510 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 128 |
| Conread position: | 325-565 |
| Cow position: | chr7:3300838-3301076 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 325-565 |
| Cow position: | chr7:52119767-52120007 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-464 |
| Cow position: | chr7:27147565-27147429 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 341-564 |
| Cow position: | chr7:1357384-1357607 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.