Cow genome map
| Conread name: | unkn-MI-P-NA-aeg-d-01-1-UM.s1.ab1 |
| Conread position: | 1-560 |
| Cow position: | chr8:45160555-45161105 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 1-563 |
| Cow position: | chr8:38606680-38607257 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 112 |
| Conread position: | 10-563 |
| Cow position: | chr8:44694113-44693557 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 11-539 |
| Cow position: | chr8:11969767-11970300 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 12-565 |
| Cow position: | chr8:61034513-61035103 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 165 |
| Conread position: | 22-565 |
| Cow position: | chr8:42160918-42161459 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 139-563 |
| Cow position: | chr8:24419846-24420262 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 205-565 |
| Cow position: | chr8:33430536-33430186 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 90 |
| Conread position: | 227-498 |
| Cow position: | chr8:16083931-16083660 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 78 |
| Conread position: | 229-481 |
| Cow position: | chr8:47673072-47672820 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-564 |
| Cow position: | chr8:12543453-12543775 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 229-564 |
| Cow position: | chr8:25543103-25542768 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 231-398 |
| Cow position: | chr8:12717198-12717036 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 236-564 |
| Cow position: | chr8:23765812-23766132 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 116 |
| Conread position: | 237-565 |
| Cow position: | chr8:45693032-45693361 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 58, 268 |
| Conread position: | 243-564 |
| Cow position: | chr8:45316539-45316859 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 253-564 |
| Cow position: | chr8:13809179-13808867 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 283-562 |
| Cow position: | chr8:8229227-8229513 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 283-563 |
| Cow position: | chr8:2170825-2171112 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 285-565 |
| Cow position: | chr8:1153763-1154042 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 293-564 |
| Cow position: | chr8:45189624-45189354 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 231 |
| Conread position: | 312-564 |
| Cow position: | chr8:47670968-47670722 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 196, 70 |
| Conread position: | 314-539 |
| Cow position: | chr8:50934618-50934391 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 319-426 |
| Cow position: | chr8:6683958-6683851 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-467 |
| Cow position: | chr8:45797804-45797952 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-562 |
| Cow position: | chr8:47074779-47074538 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 319-565 |
| Cow position: | chr8:8655707-8655954 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 320-535 |
| Cow position: | chr8:45448967-45448753 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 320-562 |
| Cow position: | chr8:23217270-23217028 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 158 |
| Conread position: | 320-564 |
| Cow position: | chr8:44036268-44036511 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 175 |
| Conread position: | 330-476 |
| Cow position: | chr8:42420064-42420211 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 330-489 |
| Cow position: | chr8:46600794-46600635 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 330-560 |
| Cow position: | chr8:27925815-27925587 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 335-562 |
| Cow position: | chr8:11774405-11774177 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 140, 0 |
Show alignments to all cow chromosomes.