Cow genome map
| Conread name: | unkn-MI-P-NA-aeg-d-01-1-UM.s1.ab1 |
| Conread position: | 1-465 |
| Cow position: | chr9:3803511-3803059 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 88 |
| Conread position: | 1-527 |
| Cow position: | chr9:44818355-44817814 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 141-562 |
| Cow position: | chr9:13476889-13477298 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 11 |
| Conread position: | 186-368 |
| Cow position: | chr9:44794754-44794577 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 209-351 |
| Cow position: | chr9:34720905-34720768 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 213-565 |
| Cow position: | chr9:39040838-39040492 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 229-564 |
| Cow position: | chr9:39993166-39992837 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 77 |
| Conread position: | 229-564 |
| Cow position: | chr9:64119068-64118743 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 237-519 |
| Cow position: | chr9:20309290-20309568 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 250-565 |
| Cow position: | chr9:3578277-3578563 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 227, 23 |
| Conread position: | 260-472 |
| Cow position: | chr9:1635763-1635552 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 260-563 |
| Cow position: | chr9:3355769-3356075 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 264-502 |
| Cow position: | chr9:26001933-26002170 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 283-564 |
| Cow position: | chr9:31021028-31020727 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 292-565 |
| Cow position: | chr9:9054874-9055148 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 319-524 |
| Cow position: | chr9:49177664-49177869 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-563 |
| Cow position: | chr9:163340-163584 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-565 |
| Cow position: | chr9:40191513-40191759 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-504 |
| Cow position: | chr9:8968795-8968972 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 182, 48 |
| Conread position: | 320-564 |
| Cow position: | chr9:2186128-2185878 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 155, 73 |
| Conread position: | 320-564 |
| Cow position: | chr9:10315529-10315284 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 89 |
| Conread position: | 320-564 |
| Cow position: | chr9:28625879-28626122 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 320-564 |
| Cow position: | chr9:37063641-37063878 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 320-564 |
| Cow position: | chr9:37129383-37129619 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 321-564 |
| Cow position: | chr9:34992554-34992311 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-563 |
| Cow position: | chr9:28678130-28677894 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 325-564 |
| Cow position: | chr9:3586525-3586287 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 89 |
| Conread position: | 334-561 |
| Cow position: | chr9:59443998-59443771 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 69, 85 |
Show alignments to all cow chromosomes.