Cow genome map

Conread name: unkn-MI-P-NA-aek-c-07-1-UM.s1.ab1

Conread position: 344-518
Cow position: chr20:14282976-14283161 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 344-518
Cow position: chr20:21428218-21428396 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 74

Conread position: 355-531
Cow position: chr20:20984060-20984247 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 176

Conread position: 356-529
Cow position: chr20:28605278-28605455 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 358-500
Cow position: chr20:18831807-18831661 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 363-486
Cow position: chr20:20720975-20720853 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 363-486
Cow position: chr20:23633537-23633407 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 363-486
Cow position: chr20:34467875-34467747 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 363-496
Cow position: chr20:32555366-32555498 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 87

Conread position: 363-528
Cow position: chr20:6603117-6603277 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 77

Conread position: 363-528
Cow position: chr20:19746047-19746219 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 18, 158

Conread position: 363-538
Cow position: chr20:11822554-11822746 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 70

Conread position: 365-520
Cow position: chr20:3599322-3599162 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 141

Conread position: 365-528
Cow position: chr20:7155255-7155424 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 365-528
Cow position: chr20:21279464-21279629 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 365-529
Cow position: chr20:11101488-11101650 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 51

Conread position: 366-510
Cow position: chr20:40578586-40578444 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 19

Conread position: 366-519
Cow position: chr20:4334451-4334299 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 91

Conread position: 366-535
Cow position: chr20:37357935-37358114 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 368-517
Cow position: chr20:11135673-11135515 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 368-518
Cow position: chr20:5644869-5645014 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 23

Conread position: 373-514
Cow position: chr20:14759579-14759440 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 67

Conread position: 373-518
Cow position: chr20:26090869-26090724 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 55

Conread position: 373-539
Cow position: chr20:21372394-21372553 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 77

Conread position: 374-528
Cow position: chr20:9376556-9376710 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 66

Conread position: 378-518
Cow position: chr20:398214-398074 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 54

Conread position: 379-501
Cow position: chr20:9433680-9433802 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 379-517
Cow position: chr20:14620210-14620069 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 379-517
Cow position: chr20:20934639-20934497 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 379-520
Cow position: chr20:14806980-14807123 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 379-528
Cow position: chr20:35605300-35605451 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 379-530
Cow position: chr20:6240427-6240270 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 11

Conread position: 379-534
Cow position: chr20:3141667-3141831 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 122

Conread position: 379-541
Cow position: chr20:10200439-10200608 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 149

Conread position: 379-541
Cow position: chr20:13617319-13617475 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 60

Conread position: 380-502
Cow position: chr20:6848989-6849116 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 380-502
Cow position: chr20:38934961-38934845 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 380-505
Cow position: chr20:37273092-37273217 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 380-510
Cow position: chr20:13023408-13023272 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 380-510
Cow position: chr20:31845191-31845058 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 380-510
Cow position: chr20:34848000-34848133 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-511
Cow position: chr20:5365020-5365159 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 380-511
Cow position: chr20:34097859-34097717 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 380-511
Cow position: chr20:38061672-38061542 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 59

Conread position: 380-514
Cow position: chr20:35442188-35442047 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 380-515
Cow position: chr20:32847439-32847577 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 380-517
Cow position: chr20:11499102-11499240 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 67, 43

Conread position: 380-517
Cow position: chr20:20967415-20967556 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 380-518
Cow position: chr20:7738137-7737996 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 380-518
Cow position: chr20:11359538-11359401 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 103

Conread position: 380-518
Cow position: chr20:14490340-14490480 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chr20:19636082-19635940 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 380-518
Cow position: chr20:23358402-23358256 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 380-518
Cow position: chr20:23846570-23846427 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 380-519
Cow position: chr20:7426103-7425959 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 380-520
Cow position: chr20:12334429-12334571 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 380-527
Cow position: chr20:27315072-27315223 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 380-528
Cow position: chr20:17733465-17733308 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-528
Cow position: chr20:20158230-20158379 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 380-530
Cow position: chr20:12581860-12581706 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 380-534
Cow position: chr20:17251811-17251975 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 380-534
Cow position: chr20:21325420-21325578 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 144

Conread position: 380-538
Cow position: chr20:1824534-1824372 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 380-538
Cow position: chr20:33780963-33781132 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 380-541
Cow position: chr20:4945160-4944992 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 149

Conread position: 380-544
Cow position: chr20:14980411-14980241 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 47

Conread position: 380-545
Cow position: chr20:14607817-14607648 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-556
Cow position: chr20:10956408-10956586 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 122, 134

Conread position: 380-558
Cow position: chr20:2743043-2742858 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 124

Conread position: 380-560
Cow position: chr20:2316331-2316149 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 156

Conread position: 380-568
Cow position: chr20:14879883-14880077 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 380-580
Cow position: chr20:36741557-36741762 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 128

Conread position: 381-517
Cow position: chr20:21345528-21345676 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 382-526
Cow position: chr20:37166047-37166190 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 63

Conread position: 383-514
Cow position: chr20:20898493-20898355 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 383-517
Cow position: chr20:3255133-3255271 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 383-518
Cow position: chr20:10208906-10209045 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 27

Conread position: 383-518
Cow position: chr20:32636233-32636095 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 383-523
Cow position: chr20:13752322-13752455 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 383-528
Cow position: chr20:21941531-21941674 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 383-541
Cow position: chr20:9379587-9379744 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 61

Conread position: 383-543
Cow position: chr20:21169665-21169505 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 56

Conread position: 383-544
Cow position: chr20:39016775-39016603 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 383-547
Cow position: chr20:20590204-20590037 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 127

Conread position: 384-521
Cow position: chr20:22923016-22923155 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 87

Conread position: 384-531
Cow position: chr20:5702822-5702979 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 384-567
Cow position: chr20:37919272-37919088 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 70

Conread position: 385-541
Cow position: chr20:16566396-16566551 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 117, 38

Conread position: 386-516
Cow position: chr20:12126204-12126065 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 386-519
Cow position: chr20:32174606-32174734 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 63

Conread position: 386-535
Cow position: chr20:33532403-33532544 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 116, 52

Conread position: 390-518
Cow position: chr20:23880004-23879868 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 390-518
Cow position: chr20:25009528-25009395 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 391-520
Cow position: chr20:4781703-4781828 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 54

Conread position: 391-534
Cow position: chr20:2298681-2298540 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 16

Conread position: 398-551
Cow position: chr20:28818823-28818668 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 126

Conread position: 401-534
Cow position: chr20:5024850-5024712 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 408-532
Cow position: chr20:19899431-19899556 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 420-518
Cow position: chr20:17764982-17764883 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.