Cow genome map

Conread name: unkn-MI-P-NA-aek-c-07-1-UM.s1.ab1

Conread position: 333-527
Cow position: chr24:30945606-30945411 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 119

Conread position: 362-518
Cow position: chr24:39914588-39914745 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 49

Conread position: 363-532
Cow position: chr24:15340446-15340266 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 117

Conread position: 363-541
Cow position: chr24:43832537-43832714 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 85

Conread position: 364-518
Cow position: chr24:3404631-3404786 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 13

Conread position: 365-538
Cow position: chr24:885435-885253 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 366-517
Cow position: chr24:6677658-6677805 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 80

Conread position: 366-521
Cow position: chr24:21252023-21251867 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 103

Conread position: 366-528
Cow position: chr24:5152535-5152707 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 366-528
Cow position: chr24:34390288-34390452 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 112

Conread position: 366-539
Cow position: chr24:22419972-22420156 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 366-539
Cow position: chr24:28024291-28024457 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 94

Conread position: 366-582
Cow position: chr24:18810843-18811074 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 368-528
Cow position: chr24:40592732-40592894 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 370-518
Cow position: chr24:4635152-4634994 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 370-518
Cow position: chr24:13114771-13114913 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 72

Conread position: 370-536
Cow position: chr24:34768552-34768379 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 125

Conread position: 371-518
Cow position: chr24:13586973-13586820 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 51

Conread position: 373-518
Cow position: chr24:18324261-18324109 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 39

Conread position: 374-523
Cow position: chr24:37945609-37945470 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 38

Conread position: 374-550
Cow position: chr24:43027206-43027021 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 136

Conread position: 375-515
Cow position: chr24:42876870-42876732 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 71

Conread position: 378-518
Cow position: chr24:11840212-11840355 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 110

Conread position: 379-502
Cow position: chr24:6102853-6102981 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 379-508
Cow position: chr24:33098447-33098311 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 379-511
Cow position: chr24:28721913-28722041 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 20

Conread position: 379-514
Cow position: chr24:21834933-21834796 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 53

Conread position: 379-514
Cow position: chr24:34302013-34301870 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 379-515
Cow position: chr24:15473553-15473697 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 26

Conread position: 379-518
Cow position: chr24:3493910-3494052 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 379-518
Cow position: chr24:6488234-6488375 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 379-518
Cow position: chr24:24013785-24013936 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 379-528
Cow position: chr24:1269809-1269958 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 68

Conread position: 379-569
Cow position: chr24:36554672-36554477 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 380-508
Cow position: chr24:390130-390261 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 380-511
Cow position: chr24:37252184-37252321 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 380-511
Cow position: chr24:41423630-41423760 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 75

Conread position: 380-517
Cow position: chr24:15861567-15861421 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 380-517
Cow position: chr24:24540464-24540322 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 380-517
Cow position: chr24:27203487-27203623 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 47

Conread position: 380-518
Cow position: chr24:2359155-2359014 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 380-518
Cow position: chr24:2992854-2992709 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 40

Conread position: 380-518
Cow position: chr24:16994908-16995049 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 380-518
Cow position: chr24:19186964-19187103 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 123, 0

Conread position: 380-518
Cow position: chr24:25971049-25970913 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 65

Conread position: 380-518
Cow position: chr24:26588247-26588389 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 380-518
Cow position: chr24:27719500-27719359 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 380-518
Cow position: chr24:37974954-37974812 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chr24:38006691-38006541 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 380-519
Cow position: chr24:7757799-7757941 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 380-519
Cow position: chr24:7777602-7777462 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 117

Conread position: 380-519
Cow position: chr24:16510004-16510143 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 119
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 380-519
Cow position: chr24:34396152-34396018 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 65

Conread position: 380-519
Cow position: chr24:36286596-36286740 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 380-523
Cow position: chr24:18374795-18374940 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 380-523
Cow position: chr24:32974570-32974428 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 76

Conread position: 380-523
Cow position: chr24:33944428-33944582 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 380-526
Cow position: chr24:25122368-25122516 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 380-528
Cow position: chr24:24136376-24136227 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 380-531
Cow position: chr24:23000040-23000184 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 61

Conread position: 380-532
Cow position: chr24:18874794-18874631 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 44

Conread position: 380-533
Cow position: chr24:17104543-17104386 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 120

Conread position: 380-535
Cow position: chr24:32891017-32890860 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 0

Conread position: 380-536
Cow position: chr24:5360743-5360903 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 380-555
Cow position: chr24:230310-230488 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 380-562
Cow position: chr24:29539903-29539719 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 160

Conread position: 380-564
Cow position: chr24:17309111-17308920 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 380-588
Cow position: chr24:40811704-40811908 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 140, 118

Conread position: 381-511
Cow position: chr24:29561545-29561415 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 106

Conread position: 381-532
Cow position: chr24:27713377-27713225 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 382-538
Cow position: chr24:30313997-30313839 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 38

Conread position: 383-508
Cow position: chr24:41916289-41916418 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 383-517
Cow position: chr24:28234072-28234211 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 383-517
Cow position: chr24:39523419-39523280 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 383-518
Cow position: chr24:12120926-12121070 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 383-518
Cow position: chr24:29984954-29984819 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 119, 62

Conread position: 383-528
Cow position: chr24:27202118-27202266 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 383-530
Cow position: chr24:28553534-28553389 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 384-508
Cow position: chr24:31816609-31816736 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 110

Conread position: 384-513
Cow position: chr24:38841391-38841267 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 53

Conread position: 384-518
Cow position: chr24:27844497-27844362 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 385-518
Cow position: chr24:41925854-41925987 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 116

Conread position: 385-523
Cow position: chr24:2223180-2223045 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 64

Conread position: 386-530
Cow position: chr24:30483908-30483761 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 387-499
Cow position: chr24:124593-124713 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 387-529
Cow position: chr24:37037936-37038073 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 65

Conread position: 390-508
Cow position: chr24:25231281-25231163 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 112, 54

Conread position: 390-539
Cow position: chr24:29524348-29524198 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 390-554
Cow position: chr24:14551497-14551671 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 391-518
Cow position: chr24:27810195-27810320 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 60

Conread position: 394-590
Cow position: chr24:30325740-30325537 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 397-544
Cow position: chr24:31160994-31160845 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.