Cow genome map

Conread name: unkn-MI-P-NA-aek-c-07-1-UM.s1.ab1

Conread position: 348-541
Cow position: chr25:18288753-18288555 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 192

Conread position: 354-530
Cow position: chr25:3141525-3141708 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 363-467
Cow position: chr25:22280967-22280862 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 363-484
Cow position: chr25:11373869-11373741 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 363-484
Cow position: chr25:18026286-18026159 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 70

Conread position: 363-536
Cow position: chr25:24862906-24863074 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 94

Conread position: 363-575
Cow position: chr25:33686654-33686429 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 365-502
Cow position: chr25:12807071-12807219 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 365-521
Cow position: chr25:17403512-17403672 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 365-526
Cow position: chr25:10303567-10303728 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 72

Conread position: 365-529
Cow position: chr25:36081908-36082072 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 75

Conread position: 366-518
Cow position: chr25:1824063-1823898 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 366-520
Cow position: chr25:20008167-20008329 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 368-518
Cow position: chr25:14833624-14833475 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 134, 64

Conread position: 369-539
Cow position: chr25:20019933-20019764 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 10

Conread position: 373-518
Cow position: chr25:2111086-2111229 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 128, 54

Conread position: 373-519
Cow position: chr25:25716687-25716839 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 50

Conread position: 376-502
Cow position: chr25:11855505-11855371 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 376-519
Cow position: chr25:2662440-2662588 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 376-531
Cow position: chr25:11315947-11316108 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 56

Conread position: 377-514
Cow position: chr25:31343984-31343843 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 28

Conread position: 378-488
Cow position: chr25:32277560-32277451 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 102, 71

Conread position: 378-526
Cow position: chr25:26156731-26156584 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 124, 71

Conread position: 379-510
Cow position: chr25:6258931-6259069 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 379-511
Cow position: chr25:33100623-33100758 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 379-518
Cow position: chr25:7641401-7641262 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 123, 16

Conread position: 379-518
Cow position: chr25:14720792-14720925 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 125, 59

Conread position: 379-530
Cow position: chr25:33550559-33550716 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 380-486
Cow position: chr25:23769838-23769728 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 380-502
Cow position: chr25:447854-447730 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 380-503
Cow position: chr25:23244953-23244827 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 380-508
Cow position: chr25:22571007-22571142 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-509
Cow position: chr25:36155867-36155995 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 19

Conread position: 380-510
Cow position: chr25:13443361-13443222 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 380-510
Cow position: chr25:36535371-36535233 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 64, 116

Conread position: 380-511
Cow position: chr25:20202962-20203094 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 380-511
Cow position: chr25:21893387-21893520 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 380-511
Cow position: chr25:22178965-22179096 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 69

Conread position: 380-512
Cow position: chr25:14945079-14944941 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 118

Conread position: 380-512
Cow position: chr25:28662159-28662294 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 380-518
Cow position: chr25:6928459-6928323 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 112, 69

Conread position: 380-518
Cow position: chr25:7306341-7306483 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 52

Conread position: 380-518
Cow position: chr25:10817373-10817233 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 115, 69

Conread position: 380-518
Cow position: chr25:14210032-14210169 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 59

Conread position: 380-518
Cow position: chr25:18551285-18551140 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 25

Conread position: 380-518
Cow position: chr25:21547206-21547350 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 380-518
Cow position: chr25:26087568-26087711 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 380-518
Cow position: chr25:26679275-26679420 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chr25:35109220-35109085 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 77

Conread position: 380-519
Cow position: chr25:11956853-11956998 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 380-519
Cow position: chr25:15552959-15553093 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 32

Conread position: 380-520
Cow position: chr25:4157197-4157052 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-521
Cow position: chr25:9615886-9616034 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 380-523
Cow position: chr25:26072512-26072365 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 380-523
Cow position: chr25:31514230-31514382 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 380-525
Cow position: chr25:13222949-13223098 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 133

Conread position: 380-528
Cow position: chr25:5922658-5922511 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 124
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 59, 90

Conread position: 380-528
Cow position: chr25:12223620-12223768 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 58

Conread position: 380-528
Cow position: chr25:14513164-14513309 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 122, 75

Conread position: 380-528
Cow position: chr25:15305727-15305884 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 38

Conread position: 380-528
Cow position: chr25:20162441-20162285 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 147

Conread position: 380-528
Cow position: chr25:31926328-31926181 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 78

Conread position: 380-528
Cow position: chr25:33776104-33776263 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 380-529
Cow position: chr25:11857938-11857782 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 380-529
Cow position: chr25:18137537-18137678 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 122, 65

Conread position: 380-530
Cow position: chr25:4504725-4504574 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 72

Conread position: 380-530
Cow position: chr25:8410985-8410828 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 380-531
Cow position: chr25:7216873-7217021 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 79

Conread position: 380-531
Cow position: chr25:18721071-18720922 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 121, 77

Conread position: 380-533
Cow position: chr25:11543543-11543393 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 32

Conread position: 380-533
Cow position: chr25:19679404-19679562 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 64, 52

Conread position: 380-534
Cow position: chr25:36873284-36873128 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 380-535
Cow position: chr25:27916061-27916211 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 58

Conread position: 380-535
Cow position: chr25:30852816-30852975 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 380-538
Cow position: chr25:7380790-7380627 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 119

Conread position: 380-548
Cow position: chr25:17141151-17141325 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 146

Conread position: 380-551
Cow position: chr25:22730879-22731054 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 10

Conread position: 380-551
Cow position: chr25:36873007-36872826 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 380-556
Cow position: chr25:31657228-31657046 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 381-505
Cow position: chr25:23779280-23779153 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 383-498
Cow position: chr25:17715936-17715826 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 383-518
Cow position: chr25:15999500-15999357 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 49

Conread position: 383-518
Cow position: chr25:26701079-26701213 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 37

Conread position: 383-519
Cow position: chr25:2361886-2362019 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 119, 67

Conread position: 383-528
Cow position: chr25:1840376-1840524 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 383-528
Cow position: chr25:17704796-17704944 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 126
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 119, 0

Conread position: 383-530
Cow position: chr25:9269395-9269545 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 383-539
Cow position: chr25:33555657-33555823 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 383-555
Cow position: chr25:28940089-28939907 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 383-562
Cow position: chr25:13272621-13272799 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 142

Conread position: 384-510
Cow position: chr25:20023333-20023209 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 118, 72

Conread position: 385-486
Cow position: chr25:36785635-36785530 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 386-518
Cow position: chr25:10643254-10643123 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 116, 64

Conread position: 386-519
Cow position: chr25:15349853-15349715 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 390-517
Cow position: chr25:18480722-18480852 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 114

Conread position: 391-512
Cow position: chr25:18646645-18646767 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 394-520
Cow position: chr25:38987231-38987353 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 108, 17

Conread position: 396-541
Cow position: chr25:2195317-2195174 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 106, 26

Conread position: 406-528
Cow position: chr25:7475523-7475651 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.