Cow genome map

Conread name: unkn-MI-P-NA-aek-c-07-1-UM.s1.ab1

Conread position: 155-521
Cow position: chr27:3306914-3306544 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 251
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 29

Conread position: 362-514
Cow position: chr27:16103735-16103576 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 43

Conread position: 363-486
Cow position: chr27:15434248-15434118 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 363-486
Cow position: chr27:22213081-22212960 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 42

Conread position: 363-514
Cow position: chr27:22245549-22245406 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 17

Conread position: 363-527
Cow position: chr27:13411446-13411615 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 48

Conread position: 363-529
Cow position: chr27:22497945-22497773 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 78

Conread position: 365-512
Cow position: chr27:21393586-21393726 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 81

Conread position: 365-531
Cow position: chr27:2957333-2957165 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 366-486
Cow position: chr27:14169320-14169195 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 366-486
Cow position: chr27:18491476-18491352 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 67

Conread position: 366-486
Cow position: chr27:25382231-25382352 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 366-518
Cow position: chr27:28001892-28002042 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 49

Conread position: 366-520
Cow position: chr27:16705171-16705012 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 366-526
Cow position: chr27:21951058-21951227 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 366-527
Cow position: chr27:11561696-11561527 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 366-539
Cow position: chr27:27648397-27648578 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 366-557
Cow position: chr27:23860084-23859881 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 43

Conread position: 368-520
Cow position: chr27:68144-67996 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 68

Conread position: 373-518
Cow position: chr27:23929880-23929739 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 27

Conread position: 376-527
Cow position: chr27:16026143-16026288 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 9, 75

Conread position: 376-528
Cow position: chr27:15332388-15332534 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 376-542
Cow position: chr27:23485122-23484952 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 48

Conread position: 377-542
Cow position: chr27:19576415-19576587 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 378-518
Cow position: chr27:28476206-28476347 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 378-543
Cow position: chr27:1184270-1184437 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 67, 121

Conread position: 379-517
Cow position: chr27:6541538-6541397 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 379-518
Cow position: chr27:16965483-16965336 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 379-518
Cow position: chr27:31210454-31210311 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 41

Conread position: 379-528
Cow position: chr27:3498457-3498307 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 379-528
Cow position: chr27:19557294-19557143 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 379-530
Cow position: chr27:12459195-12459035 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 379-536
Cow position: chr27:8062444-8062606 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 48

Conread position: 379-541
Cow position: chr27:7935251-7935416 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 131

Conread position: 380-486
Cow position: chr27:7847623-7847511 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 380-497
Cow position: chr27:13251922-13251807 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 66

Conread position: 380-508
Cow position: chr27:26400816-26400946 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 380-510
Cow position: chr27:1637030-1637157 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 74

Conread position: 380-510
Cow position: chr27:23177407-23177543 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 42

Conread position: 380-510
Cow position: chr27:26909686-26909819 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 380-511
Cow position: chr27:15315424-15315291 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 114

Conread position: 380-511
Cow position: chr27:16505005-16505138 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 85

Conread position: 380-512
Cow position: chr27:28931896-28932035 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 380-514
Cow position: chr27:23452367-23452228 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 380-515
Cow position: chr27:10581438-10581298 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 12

Conread position: 380-515
Cow position: chr27:19452907-19452763 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 380-517
Cow position: chr27:426875-426732 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 380-517
Cow position: chr27:20283541-20283406 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 122, 42

Conread position: 380-517
Cow position: chr27:20561487-20561350 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 66

Conread position: 380-517
Cow position: chr27:22171205-22171064 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 380-518
Cow position: chr27:1067473-1067337 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 100

Conread position: 380-518
Cow position: chr27:6162505-6162642 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 55

Conread position: 380-518
Cow position: chr27:13204365-13204226 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 380-518
Cow position: chr27:17397549-17397690 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 380-518
Cow position: chr27:18435228-18435369 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 380-518
Cow position: chr27:20048539-20048398 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 380-518
Cow position: chr27:20749105-20749241 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 122, 59

Conread position: 380-518
Cow position: chr27:27055194-27055057 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 59

Conread position: 380-519
Cow position: chr27:16512266-16512407 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 91

Conread position: 380-521
Cow position: chr27:12596682-12596540 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 380-523
Cow position: chr27:299475-299618 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 87

Conread position: 380-526
Cow position: chr27:17102801-17102653 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 24

Conread position: 380-528
Cow position: chr27:25790202-25790054 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 121

Conread position: 380-529
Cow position: chr27:14343544-14343685 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 120, 59

Conread position: 380-533
Cow position: chr27:11528836-11528674 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 380-534
Cow position: chr27:30444775-30444932 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 90

Conread position: 380-535
Cow position: chr27:29388577-29388416 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 380-538
Cow position: chr27:23760076-23760239 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 380-554
Cow position: chr27:26226385-26226562 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 39

Conread position: 380-574
Cow position: chr27:22220459-22220260 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 149

Conread position: 381-541
Cow position: chr27:19992053-19991888 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 85

Conread position: 382-486
Cow position: chr27:28177813-28177923 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 382-518
Cow position: chr27:6241289-6241431 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 383-502
Cow position: chr27:16246704-16246585 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 383-510
Cow position: chr27:26437219-26437351 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 383-514
Cow position: chr27:27449983-27450118 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 383-516
Cow position: chr27:6319821-6319685 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 383-518
Cow position: chr27:9977585-9977447 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 111

Conread position: 383-518
Cow position: chr27:15867292-15867154 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 383-519
Cow position: chr27:212858-212711 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 383-519
Cow position: chr27:7412295-7412154 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 383-519
Cow position: chr27:22330764-22330898 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 119, 66

Conread position: 383-527
Cow position: chr27:4944612-4944754 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 52

Conread position: 383-530
Cow position: chr27:31248707-31248857 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 383-535
Cow position: chr27:29319313-29319149 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 49

Conread position: 383-537
Cow position: chr27:1778953-1779109 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 125

Conread position: 384-518
Cow position: chr27:2592443-2592298 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 384-518
Cow position: chr27:20266324-20266465 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 114

Conread position: 384-530
Cow position: chr27:23477847-23477696 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 60, 36

Conread position: 385-519
Cow position: chr27:8790843-8790982 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 90

Conread position: 385-519
Cow position: chr27:24477317-24477186 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 62

Conread position: 387-518
Cow position: chr27:31386733-31386869 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 389-518
Cow position: chr27:4195444-4195316 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 113, 43

Conread position: 389-518
Cow position: chr27:23527605-23527738 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 390-524
Cow position: chr27:5227427-5227559 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 59

Conread position: 391-518
Cow position: chr27:24952060-24952191 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 100

Conread position: 395-528
Cow position: chr27:8791954-8792085 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 52

Conread position: 412-518
Cow position: chr27:21570509-21570616 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.