Cow genome map

Conread name: unkn-MI-P-NA-aek-c-07-1-UM.s1.ab1

Conread position: 310-538
Cow position: chr29:34359844-34359612 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 18

Conread position: 344-511
Cow position: chr29:23913382-23913210 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 355-541
Cow position: chr29:41530872-41531065 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 74

Conread position: 359-506
Cow position: chr29:2135492-2135346 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 21, 87

Conread position: 363-485
Cow position: chr29:27487217-27487348 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 363-486
Cow position: chr29:10847034-10846904 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 363-534
Cow position: chr29:21542207-21542025 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 166

Conread position: 366-500
Cow position: chr29:44684133-44684272 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 366-520
Cow position: chr29:31929023-31929182 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 14

Conread position: 366-521
Cow position: chr29:37293070-37293224 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 80

Conread position: 373-518
Cow position: chr29:25669135-25669277 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 73

Conread position: 375-508
Cow position: chr29:35501611-35501481 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 5, 58

Conread position: 375-518
Cow position: chr29:11434165-11434306 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 8

Conread position: 376-518
Cow position: chr29:36952255-36952118 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 37

Conread position: 376-519
Cow position: chr29:19176864-19176720 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 88

Conread position: 376-541
Cow position: chr29:12025429-12025262 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 5

Conread position: 378-519
Cow position: chr29:10653379-10653517 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 76

Conread position: 379-518
Cow position: chr29:14576907-14577051 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 379-518
Cow position: chr29:29308523-29308388 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 123, 68

Conread position: 379-518
Cow position: chr29:32656042-32655900 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 379-518
Cow position: chr29:36781256-36781116 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 379-533
Cow position: chr29:24660733-24660886 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 53

Conread position: 379-585
Cow position: chr29:13063907-13064112 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 84

Conread position: 380-506
Cow position: chr29:23825161-23825030 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 380-511
Cow position: chr29:4423390-4423263 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 63

Conread position: 380-511
Cow position: chr29:17297185-17297325 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-512
Cow position: chr29:39111262-39111136 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 122, 15

Conread position: 380-516
Cow position: chr29:16657748-16657883 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 15

Conread position: 380-517
Cow position: chr29:36357175-36357321 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 380-518
Cow position: chr29:4441155-4441011 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 30

Conread position: 380-518
Cow position: chr29:17110006-17110147 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 118

Conread position: 380-518
Cow position: chr29:19949356-19949499 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chr29:23678758-23678895 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 63

Conread position: 380-518
Cow position: chr29:23874509-23874656 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chr29:28195472-28195339 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 122, 69

Conread position: 380-518
Cow position: chr29:31651461-31651596 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 43

Conread position: 380-518
Cow position: chr29:40112431-40112573 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 380-519
Cow position: chr29:29296443-29296583 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 121, 0

Conread position: 380-523
Cow position: chr29:3292997-3293142 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 52

Conread position: 380-525
Cow position: chr29:8634703-8634853 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 97

Conread position: 380-527
Cow position: chr29:9310649-9310806 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 380-527
Cow position: chr29:43088357-43088509 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 380-528
Cow position: chr29:4023047-4023195 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 128

Conread position: 380-528
Cow position: chr29:5769847-5769999 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 26

Conread position: 380-528
Cow position: chr29:27042321-27042473 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 128

Conread position: 380-529
Cow position: chr29:26778931-26779081 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 380-530
Cow position: chr29:22577130-22576971 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 380-533
Cow position: chr29:31981880-31982033 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 121, 59

Conread position: 380-536
Cow position: chr29:10191989-10191834 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 122, 82

Conread position: 380-538
Cow position: chr29:8163780-8163612 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 380-538
Cow position: chr29:35292142-35292302 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 64

Conread position: 380-539
Cow position: chr29:4070673-4070835 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 380-541
Cow position: chr29:396455-396621 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 157

Conread position: 380-544
Cow position: chr29:5789077-5789234 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 126, 65

Conread position: 380-544
Cow position: chr29:15947216-15947389 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 159

Conread position: 380-550
Cow position: chr29:936256-936430 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 156

Conread position: 380-551
Cow position: chr29:1011540-1011360 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 43

Conread position: 380-559
Cow position: chr29:12890731-12890913 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 114

Conread position: 380-570
Cow position: chr29:16290775-16290973 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 95

Conread position: 381-519
Cow position: chr29:31594095-31593962 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 7

Conread position: 381-520
Cow position: chr29:22652373-22652515 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 383-503
Cow position: chr29:29057227-29057354 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 383-510
Cow position: chr29:7143347-7143485 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 383-512
Cow position: chr29:40791355-40791485 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 383-514
Cow position: chr29:41112829-41112700 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 119, 56

Conread position: 383-516
Cow position: chr29:28257193-28257335 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 383-517
Cow position: chr29:2219439-2219580 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 383-518
Cow position: chr29:7040820-7040674 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 383-518
Cow position: chr29:9378689-9378829 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 383-518
Cow position: chr29:9709747-9709887 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 383-519
Cow position: chr29:19363762-19363903 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 383-524
Cow position: chr29:5064827-5064964 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 383-528
Cow position: chr29:16279039-16279181 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 32

Conread position: 383-530
Cow position: chr29:10994564-10994721 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 383-537
Cow position: chr29:10203824-10203982 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 383-538
Cow position: chr29:8798963-8798795 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 383-555
Cow position: chr29:32894315-32894490 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 78

Conread position: 383-564
Cow position: chr29:22028903-22028722 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 119, 171

Conread position: 384-496
Cow position: chr29:22778123-22778007 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 385-530
Cow position: chr29:14746834-14746986 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 386-570
Cow position: chr29:28979447-28979275 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 180, 59

Conread position: 387-526
Cow position: chr29:31934435-31934578 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 389-518
Cow position: chr29:36183575-36183702 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 113, 26

Conread position: 389-527
Cow position: chr29:22991353-22991495 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 390-514
Cow position: chr29:9149479-9149360 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 64

Conread position: 391-531
Cow position: chr29:33551105-33550966 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 109

Conread position: 401-533
Cow position: chr29:10658446-10658310 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 127

Conread position: 402-535
Cow position: chr29:36830598-36830728 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 96

Conread position: 411-518
Cow position: chr29:31835352-31835462 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.