Cow genome map
| Conread name: | unkn-MI-P-NA-aek-c-07-1-UM.s1.ab1 |
| Conread position: | 307-517 |
| Cow position: | chr4:50837671-50837889 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 350-520 |
| Cow position: | chr4:51026365-51026540 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 355-527 |
| Cow position: | chr4:34722870-34722689 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 175 |
| Conread position: | 360-528 |
| Cow position: | chr4:44024519-44024342 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 363-486 |
| Cow position: | chr4:10410802-10410926 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 363-486 |
| Cow position: | chr4:12720152-12720280 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 363-541 |
| Cow position: | chr4:41370915-41370736 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 162 |
| Conread position: | 365-492 |
| Cow position: | chr4:60072716-60072587 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 365-510 |
| Cow position: | chr4:45775310-45775151 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 365-517 |
| Cow position: | chr4:46560208-46560365 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 365-518 |
| Cow position: | chr4:40392843-40392998 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 365-528 |
| Cow position: | chr4:12676827-12676992 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 366-502 |
| Cow position: | chr4:39091915-39092054 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 366-503 |
| Cow position: | chr4:33089900-33089758 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 123 |
| Conread position: | 366-510 |
| Cow position: | chr4:66547739-66547584 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 366-517 |
| Cow position: | chr4:59105654-59105499 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 366-518 |
| Cow position: | chr4:39010078-39010240 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 366-519 |
| Cow position: | chr4:19315979-19315819 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 366-528 |
| Cow position: | chr4:44184086-44183923 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 366-531 |
| Cow position: | chr4:27276515-27276345 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 366-533 |
| Cow position: | chr4:29384206-29384040 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 366-534 |
| Cow position: | chr4:31004380-31004208 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 366-538 |
| Cow position: | chr4:52823373-52823195 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 366-541 |
| Cow position: | chr4:22482354-22482531 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 366-545 |
| Cow position: | chr4:19420728-19420540 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 370-534 |
| Cow position: | chr4:36929342-36929494 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 66 |
| Conread position: | 370-538 |
| Cow position: | chr4:19496527-19496707 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 373-506 |
| Cow position: | chr4:16594118-16594251 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 373-541 |
| Cow position: | chr4:58018382-58018553 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 374-508 |
| Cow position: | chr4:48046371-48046239 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 374-533 |
| Cow position: | chr4:35638866-35638706 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 148 |
| Conread position: | 376-508 |
| Cow position: | chr4:7698305-7698442 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 376-517 |
| Cow position: | chr4:8675408-8675553 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 376-518 |
| Cow position: | chr4:15905142-15905293 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 376-518 |
| Cow position: | chr4:42608778-42608926 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 376-541 |
| Cow position: | chr4:66412225-66412394 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 377-519 |
| Cow position: | chr4:12867144-12867288 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 378-517 |
| Cow position: | chr4:33838761-33838617 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 378-518 |
| Cow position: | chr4:2628570-2628717 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 378-518 |
| Cow position: | chr4:20147225-20147372 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 378-518 |
| Cow position: | chr4:69458242-69458383 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 117 |
| Conread position: | 379-510 |
| Cow position: | chr4:27511587-27511727 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 379-514 |
| Cow position: | chr4:61391184-61391051 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 77 |
| Conread position: | 379-518 |
| Cow position: | chr4:20124923-20124781 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 379-518 |
| Cow position: | chr4:59557483-59557626 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 130 |
| Conread position: | 379-518 |
| Cow position: | chr4:66168289-66168151 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 123, 70 |
| Conread position: | 379-519 |
| Cow position: | chr4:63293502-63293646 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 379-526 |
| Cow position: | chr4:14020539-14020694 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 379-528 |
| Cow position: | chr4:42044932-42044778 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 379-528 |
| Cow position: | chr4:43909804-43909962 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 379-533 |
| Cow position: | chr4:36070745-36070904 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 379-539 |
| Cow position: | chr4:42231981-42231825 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 123, 89 |
| Conread position: | 380-486 |
| Cow position: | chr4:56805220-56805326 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 380-502 |
| Cow position: | chr4:58248445-58248573 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 380-503 |
| Cow position: | chr4:61969682-61969554 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 380-510 |
| Cow position: | chr4:52584030-52583898 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 380-511 |
| Cow position: | chr4:44681208-44681080 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 122, 52 |
| Conread position: | 380-511 |
| Cow position: | chr4:47230954-47230816 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 380-511 |
| Cow position: | chr4:47283969-47283831 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 380-513 |
| Cow position: | chr4:15236676-15236806 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 380-514 |
| Cow position: | chr4:2770117-2770254 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 380-514 |
| Cow position: | chr4:13344582-13344719 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 380-514 |
| Cow position: | chr4:59002096-59001955 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 380-517 |
| Cow position: | chr4:32693832-32693974 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 380-517 |
| Cow position: | chr4:38944214-38944072 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 380-518 |
| Cow position: | chr4:12127595-12127452 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 380-518 |
| Cow position: | chr4:19744919-19745057 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 69 |
| Conread position: | 380-518 |
| Cow position: | chr4:28854231-28854089 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 380-518 |
| Cow position: | chr4:30691047-30691189 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 380-518 |
| Cow position: | chr4:30943998-30944141 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 380-518 |
| Cow position: | chr4:37915292-37915151 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 380-518 |
| Cow position: | chr4:51083294-51083153 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 380-518 |
| Cow position: | chr4:60955371-60955508 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 380-518 |
| Cow position: | chr4:61608921-61608781 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 118 |
| Conread position: | 380-518 |
| Cow position: | chr4:65463465-65463326 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 380-519 |
| Cow position: | chr4:8083754-8083620 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 122, 64 |
| Conread position: | 380-519 |
| Cow position: | chr4:32601878-32602014 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 74 |
| Conread position: | 380-519 |
| Cow position: | chr4:46136794-46136937 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 380-519 |
| Cow position: | chr4:59015632-59015768 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 54 |
| Conread position: | 380-520 |
| Cow position: | chr4:561675-561820 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 380-520 |
| Cow position: | chr4:22849448-22849313 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 67 |
| Conread position: | 380-520 |
| Cow position: | chr4:46494347-46494490 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 111 |
| Conread position: | 380-521 |
| Cow position: | chr4:22101221-22101071 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 380-523 |
| Cow position: | chr4:29805330-29805177 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 380-526 |
| Cow position: | chr4:508865-508717 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 380-526 |
| Cow position: | chr4:22010014-22009867 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 102 |
| Conread position: | 380-527 |
| Cow position: | chr4:23509637-23509789 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 114 |
| Conread position: | 380-527 |
| Cow position: | chr4:46656173-46656330 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 380-528 |
| Cow position: | chr4:12052285-12052140 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 380-528 |
| Cow position: | chr4:12908417-12908568 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 380-528 |
| Cow position: | chr4:14131471-14131626 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 380-528 |
| Cow position: | chr4:27657020-27657171 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 380-528 |
| Cow position: | chr4:30647898-30648044 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 380-528 |
| Cow position: | chr4:40414584-40414430 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 380-528 |
| Cow position: | chr4:55694218-55694367 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 380-530 |
| Cow position: | chr4:10732267-10732415 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 125 |
| Conread position: | 380-530 |
| Cow position: | chr4:24810408-24810246 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 380-531 |
| Cow position: | chr4:39007548-39007701 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 140, 119 |
| Conread position: | 380-532 |
| Cow position: | chr4:66509681-66509828 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 59 |
| Conread position: | 380-534 |
| Cow position: | chr4:53347931-53347776 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 380-535 |
| Cow position: | chr4:8182593-8182430 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 380-535 |
| Cow position: | chr4:19199243-19199077 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 380-536 |
| Cow position: | chr4:60897239-60897087 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 64 |
| Conread position: | 380-538 |
| Cow position: | chr4:25929260-25929416 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 122, 58 |
| Conread position: | 380-538 |
| Cow position: | chr4:34983455-34983297 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 380-538 |
| Cow position: | chr4:53126155-53126304 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 58 |
| Conread position: | 380-539 |
| Cow position: | chr4:45840442-45840600 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 122, 65 |
| Conread position: | 380-542 |
| Cow position: | chr4:61066809-61066962 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 118, 64 |
| Conread position: | 380-548 |
| Cow position: | chr4:59755600-59755436 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 380-553 |
| Cow position: | chr4:19292765-19292937 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 380-554 |
| Cow position: | chr4:60527224-60527404 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 380-563 |
| Cow position: | chr4:29842870-29843051 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 123, 56 |
| Conread position: | 380-568 |
| Cow position: | chr4:25802734-25802929 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 166 |
| Conread position: | 380-570 |
| Cow position: | chr4:4320947-4320750 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 380-570 |
| Cow position: | chr4:30769079-30769270 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 381-506 |
| Cow position: | chr4:42423760-42423630 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 382-531 |
| Cow position: | chr4:68590817-68590972 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 383-502 |
| Cow position: | chr4:61999151-61999028 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 383-511 |
| Cow position: | chr4:972735-972602 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 383-511 |
| Cow position: | chr4:63198325-63198185 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 383-517 |
| Cow position: | chr4:44772996-44772853 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 383-518 |
| Cow position: | chr4:2537326-2537456 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 119, 55 |
| Conread position: | 383-518 |
| Cow position: | chr4:17790245-17790109 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 383-518 |
| Cow position: | chr4:19503975-19504109 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 119, 107 |
| Conread position: | 383-518 |
| Cow position: | chr4:26659346-26659487 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 383-518 |
| Cow position: | chr4:29291561-29291693 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 119, 76 |
| Conread position: | 383-518 |
| Cow position: | chr4:36290671-36290809 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 383-518 |
| Cow position: | chr4:48693645-48693782 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 383-518 |
| Cow position: | chr4:56239813-56239677 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 383-519 |
| Cow position: | chr4:51617952-51617808 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 383-527 |
| Cow position: | chr4:19501045-19500892 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 383-528 |
| Cow position: | chr4:49794706-49794847 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 119, 56 |
| Conread position: | 383-528 |
| Cow position: | chr4:51728126-51728271 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 62 |
| Conread position: | 383-528 |
| Cow position: | chr4:67393138-67393292 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 383-529 |
| Cow position: | chr4:21554039-21553894 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 383-537 |
| Cow position: | chr4:3837321-3837473 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 383-550 |
| Cow position: | chr4:60302960-60302796 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 121, 56 |
| Conread position: | 383-553 |
| Cow position: | chr4:26549754-26549930 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 66 |
| Conread position: | 383-569 |
| Cow position: | chr4:8871461-8871657 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 383-570 |
| Cow position: | chr4:10786093-10785898 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 384-514 |
| Cow position: | chr4:68358378-68358509 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 384-528 |
| Cow position: | chr4:348377-348230 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 385-518 |
| Cow position: | chr4:49880646-49880518 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 119, 54 |
| Conread position: | 385-519 |
| Cow position: | chr4:961602-961477 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 117, 63 |
| Conread position: | 385-529 |
| Cow position: | chr4:19102833-19102678 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 385-530 |
| Cow position: | chr4:25370153-25370293 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 117, 64 |
| Conread position: | 385-538 |
| Cow position: | chr4:43579364-43579210 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 385-541 |
| Cow position: | chr4:4084401-4084250 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 117, 53 |
| Conread position: | 386-520 |
| Cow position: | chr4:12748363-12748232 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 386-525 |
| Cow position: | chr4:51867253-51867393 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 85 |
| Conread position: | 386-526 |
| Cow position: | chr4:34699984-34699849 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 46 |
| Conread position: | 386-543 |
| Cow position: | chr4:16239119-16238956 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 390-538 |
| Cow position: | chr4:23846997-23846847 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 391-582 |
| Cow position: | chr4:8389027-8388828 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 393-519 |
| Cow position: | chr4:57556543-57556667 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 56 |
| Conread position: | 395-518 |
| Cow position: | chr4:29206591-29206712 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 395-519 |
| Cow position: | chr4:51851271-51851400 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 395-532 |
| Cow position: | chr4:45724927-45725064 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 396-518 |
| Cow position: | chr4:11222194-11222310 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 106, 28 |
| Conread position: | 409-513 |
| Cow position: | chr4:25146623-25146514 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.