Cow genome map

Conread name: unkn-MI-P-NA-aek-c-07-1-UM.s1.ab1

Conread position: 295-569
Cow position: chrX:27705576-27705863 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 11

Conread position: 305-528
Cow position: chrX:42539559-42539781 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 106

Conread position: 344-502
Cow position: chrX:31294532-31294362 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 344-528
Cow position: chrX:7277951-7278140 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 149

Conread position: 356-542
Cow position: chrX:3494995-3494801 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 10

Conread position: 363-486
Cow position: chrX:30042031-30041901 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 363-502
Cow position: chrX:126827-126963 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 88

Conread position: 363-518
Cow position: chrX:46909875-46910032 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 130

Conread position: 363-529
Cow position: chrX:14973686-14973522 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 87

Conread position: 363-538
Cow position: chrX:21288548-21288360 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 363-563
Cow position: chrX:27202630-27202840 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 180

Conread position: 365-512
Cow position: chrX:42331346-42331491 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 81

Conread position: 365-518
Cow position: chrX:16836228-16836070 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 365-540
Cow position: chrX:14925334-14925516 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 164

Conread position: 366-455
Cow position: chrX:27393963-27393873 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 366-487
Cow position: chrX:40543458-40543336 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 54

Conread position: 366-502
Cow position: chrX:41068788-41068927 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 366-517
Cow position: chrX:20752285-20752429 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 35

Conread position: 366-517
Cow position: chrX:42432445-42432291 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 366-518
Cow position: chrX:161475-161624 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 88

Conread position: 366-519
Cow position: chrX:908009-908166 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 89

Conread position: 366-519
Cow position: chrX:1615980-1615833 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 46

Conread position: 366-519
Cow position: chrX:38218777-38218938 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 366-520
Cow position: chrX:1499728-1499880 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 76

Conread position: 366-528
Cow position: chrX:13135489-13135320 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 13

Conread position: 366-530
Cow position: chrX:16556154-16555987 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 39

Conread position: 366-540
Cow position: chrX:33000968-33001146 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 81

Conread position: 366-540
Cow position: chrX:46072754-46072587 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 74

Conread position: 366-555
Cow position: chrX:15545945-15546145 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 131

Conread position: 370-486
Cow position: chrX:24135510-24135391 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 373-518
Cow position: chrX:34565356-34565509 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 7

Conread position: 373-520
Cow position: chrX:40116551-40116694 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 66

Conread position: 373-532
Cow position: chrX:26979719-26979551 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 7

Conread position: 373-541
Cow position: chrX:33654774-33654597 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 171

Conread position: 373-554
Cow position: chrX:25441474-25441297 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 84

Conread position: 374-486
Cow position: chrX:24277390-24277503 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 375-514
Cow position: chrX:14900429-14900291 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 64

Conread position: 375-518
Cow position: chrX:38549519-38549671 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 375-520
Cow position: chrX:15007077-15006933 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 54

Conread position: 375-541
Cow position: chrX:23359042-23358871 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 164

Conread position: 376-538
Cow position: chrX:17956764-17956931 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 150

Conread position: 378-518
Cow position: chrX:19018755-19018604 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 378-518
Cow position: chrX:39352861-39352996 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 74

Conread position: 379-485
Cow position: chrX:28923106-28923210 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 379-494
Cow position: chrX:20678065-20677948 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 379-502
Cow position: chrX:40035363-40035232 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 379-509
Cow position: chrX:42247105-42246966 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 379-517
Cow position: chrX:48822265-48822119 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 379-518
Cow position: chrX:10252123-10251978 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 379-518
Cow position: chrX:27668881-27668738 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 102

Conread position: 379-518
Cow position: chrX:35029849-35029712 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 60

Conread position: 379-518
Cow position: chrX:35285250-35285398 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 379-528
Cow position: chrX:5487862-5487713 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 70

Conread position: 379-532
Cow position: chrX:12437194-12437046 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 13

Conread position: 379-540
Cow position: chrX:32747809-32747970 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 135, 120

Conread position: 380-484
Cow position: chrX:11614771-11614874 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 380-493
Cow position: chrX:39094244-39094132 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 31

Conread position: 380-502
Cow position: chrX:27511506-27511628 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 380-508
Cow position: chrX:26205370-26205243 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 32

Conread position: 380-509
Cow position: chrX:4768810-4768943 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 380-509
Cow position: chrX:36866251-36866388 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 28

Conread position: 380-510
Cow position: chrX:31436552-31436685 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 380-511
Cow position: chrX:20151934-20152065 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 78

Conread position: 380-511
Cow position: chrX:35681645-35681784 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 380-514
Cow position: chrX:25420409-25420544 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 64

Conread position: 380-514
Cow position: chrX:39290437-39290575 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 51

Conread position: 380-518
Cow position: chrX:4268986-4268846 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 380-518
Cow position: chrX:4559811-4559958 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 380-518
Cow position: chrX:9252085-9251939 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 380-518
Cow position: chrX:11589289-11589143 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chrX:11656159-11656302 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 380-518
Cow position: chrX:11762923-11762787 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 75

Conread position: 380-518
Cow position: chrX:12972761-12972902 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 380-518
Cow position: chrX:13177398-13177260 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 121

Conread position: 380-518
Cow position: chrX:16984719-16984859 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 40

Conread position: 380-518
Cow position: chrX:20339814-20339671 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 19

Conread position: 380-518
Cow position: chrX:27175076-27175224 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chrX:27431840-27431700 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 123

Conread position: 380-518
Cow position: chrX:29478801-29478946 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chrX:35658874-35659018 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 127

Conread position: 380-518
Cow position: chrX:36356184-36356328 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 21

Conread position: 380-518
Cow position: chrX:38094442-38094302 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 123

Conread position: 380-518
Cow position: chrX:38964186-38964321 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 59

Conread position: 380-518
Cow position: chrX:41215400-41215547 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 380-518
Cow position: chrX:41238277-41238138 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 380-518
Cow position: chrX:41858804-41858660 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 380-518
Cow position: chrX:42449936-42449789 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 380-518
Cow position: chrX:42894004-42894146 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 380-518
Cow position: chrX:46068681-46068540 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 131

Conread position: 380-518
Cow position: chrX:46587900-46588044 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 93

Conread position: 380-519
Cow position: chrX:21986213-21986076 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 123, 58

Conread position: 380-519
Cow position: chrX:22392906-22392763 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 43

Conread position: 380-519
Cow position: chrX:31744926-31744790 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 67

Conread position: 380-519
Cow position: chrX:34314102-34314246 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 380-519
Cow position: chrX:41166747-41166604 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 380-520
Cow position: chrX:34270639-34270787 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 93

Conread position: 380-520
Cow position: chrX:36722727-36722587 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 73

Conread position: 380-521
Cow position: chrX:29601750-29601602 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 380-523
Cow position: chrX:22552901-22552750 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 32

Conread position: 380-526
Cow position: chrX:39419636-39419489 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 380-526
Cow position: chrX:40556381-40556231 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 380-527
Cow position: chrX:11653848-11654000 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 380-527
Cow position: chrX:27074973-27074818 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 380-527
Cow position: chrX:31480046-31480203 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 380-528
Cow position: chrX:3806760-3806912 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 380-528
Cow position: chrX:6407621-6407778 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 380-528
Cow position: chrX:6544332-6544479 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 58

Conread position: 380-528
Cow position: chrX:16323940-16323781 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 380-528
Cow position: chrX:20584406-20584547 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 60

Conread position: 380-528
Cow position: chrX:23497613-23497463 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 52

Conread position: 380-528
Cow position: chrX:29050325-29050476 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 112

Conread position: 380-528
Cow position: chrX:35268939-35269090 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 114

Conread position: 380-528
Cow position: chrX:42479911-42480063 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 380-529
Cow position: chrX:40567699-40567840 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 124, 65

Conread position: 380-529
Cow position: chrX:40685250-40685095 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 140

Conread position: 380-531
Cow position: chrX:1571511-1571361 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 122, 140

Conread position: 380-531
Cow position: chrX:22074878-22075030 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 101

Conread position: 380-531
Cow position: chrX:34836986-34836834 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 140, 0

Conread position: 380-531
Cow position: chrX:35885649-35885494 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 380-533
Cow position: chrX:11602407-11602248 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 127

Conread position: 380-536
Cow position: chrX:17525789-17525634 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 119

Conread position: 380-538
Cow position: chrX:1088065-1087905 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 142

Conread position: 380-540
Cow position: chrX:9201626-9201791 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 158

Conread position: 380-541
Cow position: chrX:32877297-32877137 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 125

Conread position: 380-544
Cow position: chrX:11633760-11633933 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 380-544
Cow position: chrX:23136818-23136984 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 109

Conread position: 380-555
Cow position: chrX:40336988-40337169 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 148

Conread position: 380-565
Cow position: chrX:12290797-12290988 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 174

Conread position: 380-568
Cow position: chrX:20583744-20583929 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 123

Conread position: 380-570
Cow position: chrX:42875290-42875486 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 380-578
Cow position: chrX:17524306-17524095 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 35

Conread position: 381-522
Cow position: chrX:44397089-44397239 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 9

Conread position: 381-535
Cow position: chrX:46793667-46793508 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 382-518
Cow position: chrX:19356543-19356688 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 382-518
Cow position: chrX:32866955-32867094 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 383-486
Cow position: chrX:21171-21280 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 383-491
Cow position: chrX:23188703-23188593 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 383-502
Cow position: chrX:30824070-30824192 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 383-510
Cow position: chrX:2314538-2314402 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 383-510
Cow position: chrX:35509598-35509464 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 383-510
Cow position: chrX:41810087-41809959 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 383-514
Cow position: chrX:27415499-27415368 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 112
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 94

Conread position: 383-515
Cow position: chrX:11529424-11529559 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 383-517
Cow position: chrX:8869321-8869181 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 383-517
Cow position: chrX:31442748-31442616 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 56

Conread position: 383-518
Cow position: chrX:13923945-13924085 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 383-518
Cow position: chrX:27261273-27261414 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 119

Conread position: 383-518
Cow position: chrX:44995580-44995724 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 383-519
Cow position: chrX:27145685-27145824 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 383-522
Cow position: chrX:30840627-30840768 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 132

Conread position: 383-523
Cow position: chrX:19795422-19795281 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 28

Conread position: 383-526
Cow position: chrX:34222797-34222944 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 16

Conread position: 383-528
Cow position: chrX:8326985-8327139 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 383-530
Cow position: chrX:30420871-30420731 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 66

Conread position: 383-530
Cow position: chrX:35382956-35382806 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 383-532
Cow position: chrX:26881484-26881323 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 105

Conread position: 383-538
Cow position: chrX:1938095-1938261 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 383-539
Cow position: chrX:26881999-26881832 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 383-540
Cow position: chrX:34504967-34504808 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 35

Conread position: 383-551
Cow position: chrX:41199305-41199483 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 383-555
Cow position: chrX:1122466-1122288 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 144

Conread position: 384-516
Cow position: chrX:34543866-34544008 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 384-518
Cow position: chrX:2551174-2551301 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 66

Conread position: 384-531
Cow position: chrX:42927742-42927592 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 83

Conread position: 384-538
Cow position: chrX:43028314-43028472 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 140

Conread position: 385-518
Cow position: chrX:20710255-20710382 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 60

Conread position: 385-518
Cow position: chrX:31279841-31279703 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 385-528
Cow position: chrX:5097713-5097560 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 385-531
Cow position: chrX:41487847-41487712 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 385-542
Cow position: chrX:11670769-11670937 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 386-501
Cow position: chrX:3860551-3860443 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 386-518
Cow position: chrX:35390675-35390539 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 98

Conread position: 386-528
Cow position: chrX:40108259-40108108 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 386-540
Cow position: chrX:15147113-15146955 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 111

Conread position: 388-528
Cow position: chrX:23574895-23575030 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 21

Conread position: 390-518
Cow position: chrX:4399207-4399342 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 391-518
Cow position: chrX:34792223-34792099 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 394-536
Cow position: chrX:26956460-26956319 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 63

Conread position: 395-519
Cow position: chrX:22284783-22284908 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 397-520
Cow position: chrX:10479844-10479976 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 400-518
Cow position: chrX:32910197-32910321 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 402-528
Cow position: chrX:13892917-13893040 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 47

Conread position: 420-529
Cow position: chrX:20790809-20790701 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 70

Show alignments to all cow chromosomes.