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Cow genome map

           
Conread name:
           
unkn-MI-P-NA-aeq-b-03-1-UM.s1
        

               
Conread position:
               
52-473
               

               
Cow position:
               
chr4:8705187-8704757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
90-313
               

               
Cow position:
               
chr4:54920939-54921162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
118-486
               

               
Cow position:
               
chr4:3688053-3687688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 202
               

               
Conread position:
               
118-486
               

               
Cow position:
               
chr4:45234747-45235100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 163
               

               
Conread position:
               
120-486
               

               
Cow position:
               
chr4:21391691-21392045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 119
               

               
Conread position:
               
122-482
               

               
Cow position:
               
chr4:24371741-24372087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
122-486
               

               
Cow position:
               
chr4:22101146-22101507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
124-261
               

               
Cow position:
               
chr4:60527297-60527160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-268
               

               
Cow position:
               
chr4:46560299-46560153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
124-273
               

               
Cow position:
               
chr4:20124849-20125000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
124-275
               

               
Cow position:
               
chr4:34562498-34562348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
124-287
               

               
Cow position:
               
chr4:33181661-33181497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
124-309
               

               
Cow position:
               
chr4:62370428-62370247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
124-347
               

               
Cow position:
               
chr4:2774836-2774609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 157
               

               
Conread position:
               
124-364
               

               
Cow position:
               
chr4:45636283-45636039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 218
               

               
Conread position:
               
124-478
               

               
Cow position:
               
chr4:9815232-9815584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
151, 7
               

               
Conread position:
               
124-486
               

               
Cow position:
               
chr4:14414230-14414586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 89
               

               
Conread position:
               
124-486
               

               
Cow position:
               
chr4:23450977-23451336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 171
               

               
Conread position:
               
124-486
               

               
Cow position:
               
chr4:69406462-69406128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
125-305
               

               
Cow position:
               
chr4:49800806-49800628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
125-389
               

               
Cow position:
               
chr4:20026987-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
125-486
               

               
Cow position:
               
chr4:19314130-19313764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
126-276
               

               
Cow position:
               
chr4:38700042-38700192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
126-414
               

               
Cow position:
               
chr4:23758918-23758632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
126-414
               

               
Cow position:
               
chr4:50769650-50769938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
126-481
               

               
Cow position:
               
chr4:21365517-21365169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
127-236
               

               
Cow position:
               
chr4:54500908-54501018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 76
               

               
Conread position:
               
127-261
               

               
Cow position:
               
chr4:16221763-16221897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
127-456
               

               
Cow position:
               
chr4:9681419-9681091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
127-482
               

               
Cow position:
               
chr4:8801617-8801271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
127-486
               

               
Cow position:
               
chr4:961537-961903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 244
               

               
Conread position:
               
127-486
               

               
Cow position:
               
chr4:12561155-12560796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 176
               

               
Conread position:
               
128-276
               

               
Cow position:
               
chr4:12135813-12135962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
128-391
               

               
Cow position:
               
chr4:54524232-54524479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
179, 53
               

               
Conread position:
               
129-334
               

               
Cow position:
               
chr4:45799982-45799779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
129-371
               

               
Cow position:
               
chr4:59101400-59101645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 235
               

               
Conread position:
               
130-319
               

               
Cow position:
               
chr4:10851340-10851529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
149, 79
               

               
Conread position:
               
130-424
               

               
Cow position:
               
chr4:17186240-17186535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
149, 91
               

               
Conread position:
               
130-486
               

               
Cow position:
               
chr4:10056315-10055971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
130-486
               

               
Cow position:
               
chr4:56239748-56240085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
131-235
               

               
Cow position:
               
chr4:21532987-21533090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
131-237
               

               
Cow position:
               
chr4:33870184-33870078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-237
               

               
Cow position:
               
chr4:46761717-46761611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-240
               

               
Cow position:
               
chr4:479682-479793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
131-243
               

               
Cow position:
               
chr4:59015696-59015590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
131-250
               

               
Cow position:
               
chr4:51708175-51708056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-251
               

               
Cow position:
               
chr4:17790182-17790302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-254
               

               
Cow position:
               
chr4:8083688-8083812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
131-255
               

               
Cow position:
               
chr4:1236764-1236887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
131-257
               

               
Cow position:
               
chr4:53819576-53819702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-257
               

               
Cow position:
               
chr4:61268300-61268175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
131-263
               

               
Cow position:
               
chr4:27699141-27699010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
131-264
               

               
Cow position:
               
chr4:61608855-61608988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-265
               

               
Cow position:
               
chr4:44786152-44786018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-268
               

               
Cow position:
               
chr4:54854692-54854832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
131-271
               

               
Cow position:
               
chr4:54937191-54937047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
131-273
               

               
Cow position:
               
chr4:15236742-15236604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
131-273
               

               
Cow position:
               
chr4:40995840-40995699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
131-273
               

               
Cow position:
               
chr4:45862522-45862385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-273
               

               
Cow position:
               
chr4:45909868-45910009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
131-274
               

               
Cow position:
               
chr4:36744688-36744547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 82
               

               
Conread position:
               
131-276
               

               
Cow position:
               
chr4:1645983-1646127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
131-276
               

               
Cow position:
               
chr4:7698375-7698231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
131-276
               

               
Cow position:
               
chr4:15462141-15462288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
131-276
               

               
Cow position:
               
chr4:51920654-51920509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-276
               

               
Cow position:
               
chr4:67393201-67393060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
131-277
               

               
Cow position:
               
chr4:42231914-42232059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
131-277
               

               
Cow position:
               
chr4:44854181-44854326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
131-277
               

               
Cow position:
               
chr4:50687756-50687897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
131-286
               

               
Cow position:
               
chr4:8182527-8182683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 148
               

               
Conread position:
               
131-286
               

               
Cow position:
               
chr4:54541528-54541683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-309
               

               
Cow position:
               
chr4:13608563-13608392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr4:19199177-19199361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 86
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr4:47038877-47038695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
131-319
               

               
Cow position:
               
chr4:45626518-45626703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
176, 39
               

               
Conread position:
               
131-320
               

               
Cow position:
               
chr4:17218020-17218210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
147, 27
               

               
Conread position:
               
131-325
               

               
Cow position:
               
chr4:61188760-61188956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
131-329
               

               
Cow position:
               
chr4:61757771-61757590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
131-331
               

               
Cow position:
               
chr4:19102772-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
141, 121
               

               
Conread position:
               
131-333
               

               
Cow position:
               
chr4:20142802-20143002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
131-334
               

               
Cow position:
               
chr4:34503406-34503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
131-334
               

               
Cow position:
               
chr4:45563856-45563647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
131-338
               

               
Cow position:
               
chr4:32693898-32693685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr4:41900074-41899874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
170, 50
               

               
Conread position:
               
131-351
               

               
Cow position:
               
chr4:19098582-19098357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 206
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr4:46494413-46494179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 166
               

               
Conread position:
               
131-361
               

               
Cow position:
               
chr4:39458761-39458517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
131-363
               

               
Cow position:
               
chr4:38946325-38946084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 85
               

               
Conread position:
               
131-364
               

               
Cow position:
               
chr4:69411805-69412047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 109
               

               
Conread position:
               
131-365
               

               
Cow position:
               
chr4:24481563-24481790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
131-366
               

               
Cow position:
               
chr4:65265196-65265437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
131, 121
               

               
Conread position:
               
131-369
               

               
Cow position:
               
chr4:19578497-19578273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
131-374
               

               
Cow position:
               
chr4:56498770-56499013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
131-380
               

               
Cow position:
               
chr4:37732373-37732626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
131-381
               

               
Cow position:
               
chr4:16814492-16814241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
176, 131
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr4:36577517-36577777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
73, 160
               

               
Conread position:
               
131-394
               

               
Cow position:
               
chr4:59378019-59377762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 174
               

               
Conread position:
               
131-394
               

               
Cow position:
               
chr4:61313103-61313360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 143
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr4:29805264-29805529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 89
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr4:49629591-49629324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 146
               

               
Conread position:
               
131-403
               

               
Cow position:
               
chr4:47262643-47262371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
131-404
               

               
Cow position:
               
chr4:2099740-2099471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr4:19500982-19501248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 152
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr4:17774240-17774521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
139, 235
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr4:396041-395767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
131-411
               

               
Cow position:
               
chr4:27632549-27632284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 20
               

               
Conread position:
               
131-412
               

               
Cow position:
               
chr4:806166-805887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
131-416
               

               
Cow position:
               
chr4:3421736-3421453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 180
               

               
Conread position:
               
131-416
               

               
Cow position:
               
chr4:38887002-38887311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
131-423
               

               
Cow position:
               
chr4:32458750-32459043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 234
               

               
Conread position:
               
131-442
               

               
Cow position:
               
chr4:38944148-38944461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 101
               

               
Conread position:
               
131-444
               

               
Cow position:
               
chr4:11496541-11496829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
178, 32
               

               
Conread position:
               
131-445
               

               
Cow position:
               
chr4:19407888-19408199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
131-446
               

               
Cow position:
               
chr4:43515826-43515522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
131-448
               

               
Cow position:
               
chr4:29107017-29106697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
131-451
               

               
Cow position:
               
chr4:30792078-30791759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 117
               

               
Conread position:
               
131-453
               

               
Cow position:
               
chr4:1354503-1354821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
131-454
               

               
Cow position:
               
chr4:28839726-28839418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 10
               

               
Conread position:
               
131-455
               

               
Cow position:
               
chr4:65175035-65175351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 153
               

               
Conread position:
               
131-457
               

               
Cow position:
               
chr4:29384125-29384430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
131-457
               

               
Cow position:
               
chr4:48322144-48321817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
131-459
               

               
Cow position:
               
chr4:13973860-13974185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 227
               

               
Conread position:
               
131-460
               

               
Cow position:
               
chr4:43740643-43740307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
131-463
               

               
Cow position:
               
chr4:38935470-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
131-465
               

               
Cow position:
               
chr4:19744985-19744664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
155, 72
               

               
Conread position:
               
131-468
               

               
Cow position:
               
chr4:16762616-16762954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 216
               

               
Conread position:
               
131-473
               

               
Cow position:
               
chr4:2602340-2602003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
131-473
               

               
Cow position:
               
chr4:13222077-13222403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 101
               

               
Conread position:
               
131-473
               

               
Cow position:
               
chr4:25227050-25226706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
131-473
               

               
Cow position:
               
chr4:36290734-36290380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 147
               

               
Conread position:
               
131-474
               

               
Cow position:
               
chr4:34211277-34210937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
131-478
               

               
Cow position:
               
chr4:31136864-31136523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
131-478
               

               
Cow position:
               
chr4:39128647-39128298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 82
               

               
Conread position:
               
131-478
               

               
Cow position:
               
chr4:45583013-45583360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 84
               

               
Conread position:
               
131-479
               

               
Cow position:
               
chr4:21259322-21258983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
160, 53
               

               
Conread position:
               
131-480
               

               
Cow position:
               
chr4:23509703-23509354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 82
               

               
Conread position:
               
131-481
               

               
Cow position:
               
chr4:25879500-25879161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 82
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr4:13326844-13327194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr4:15635338-15635679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr4:19584813-19584468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 82
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr4:27530228-27529877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 169
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr4:58880852-58881203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr4:68234076-68233742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
131-483
               

               
Cow position:
               
chr4:7808683-7808345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
131-483
               

               
Cow position:
               
chr4:18974533-18974195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
131-483
               

               
Cow position:
               
chr4:26323850-26323496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 232
               

               
Conread position:
               
131-484
               

               
Cow position:
               
chr4:570902-570561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
144, 179
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr4:11099546-11099908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr4:22725200-22724884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr4:23444936-23445291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr4:45644209-45644551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr4:53208403-53208062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 170
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr4:54191199-54190857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 101
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:656699-657058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:1495299-1495640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:4320881-4321246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 141
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:7571522-7571169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:10905360-10905699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 39
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:12004324-12003983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 82
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:12127528-12127883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 143
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:12591104-12591451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 168
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:13406814-13406466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
144, 14
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:15905212-15904858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 242
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:17052483-17052838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 238
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:17832792-17833146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
130, 27
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:19435365-19435020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 132
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:19542242-19541886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 92
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:19582508-19582855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
144, 85
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:19709049-19708701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 187
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:21531534-21531881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
150, 82
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:23600277-23599930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 139
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:23846942-23847291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:25888725-25889073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:26659410-26659065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:28836644-28836286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 39
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:32259733-32260087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 142
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:33433148-33433499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:34383232-34383577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:35982108-35981749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:36841375-36841039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:37502923-37502581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:37704375-37704025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:37915226-37915570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 101
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:37935174-37935521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 227
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:40414518-40414871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 203
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:41185810-41186147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 73
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:41300888-41301231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 27
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:42423695-42424042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
185, 144
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:42481291-42480947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:43148521-43148163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:43865747-43866091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 97
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:44613111-44612763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:44782484-44782134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 96
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:44838785-44839125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 25
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:45738365-45738724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 230
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:45775228-45775582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 272
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:46455959-46456288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 82
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:46550494-46550144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:48173246-48172870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 158
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:48235736-48235399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
234, 27
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:48961376-48961730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:49089896-49089554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
151, 54
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:51784290-51783941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:51851322-51850956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 185
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:54938004-54937646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:59871579-59871253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:62472189-62471828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:63095964-63096315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 143
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:63349381-63349711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr4:66172681-66173038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 182
               

               
Conread position:
               
132-240
               

               
Cow position:
               
chr4:56805285-56805181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
132-246
               

               
Cow position:
               
chr4:65806004-65805890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-256
               

               
Cow position:
               
chr4:19496603-19496479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-265
               

               
Cow position:
               
chr4:13919086-13918957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
132-267
               

               
Cow position:
               
chr4:46702549-46702684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-276
               

               
Cow position:
               
chr4:19324083-19323939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-276
               

               
Cow position:
               
chr4:50676064-50676205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chr4:59002031-59002202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
132-337
               

               
Cow position:
               
chr4:5963881-5964086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
132-338
               

               
Cow position:
               
chr4:44184007-44184210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
132-347
               

               
Cow position:
               
chr4:45724976-45724767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
132-352
               

               
Cow position:
               
chr4:38156979-38157204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
132-357
               

               
Cow position:
               
chr4:11380388-11380166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
175, 99
               

               
Conread position:
               
132-363
               

               
Cow position:
               
chr4:52779960-52779728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
132-370
               

               
Cow position:
               
chr4:47280236-47280008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
132-390
               

               
Cow position:
               
chr4:45250079-45249828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
132-400
               

               
Cow position:
               
chr4:48104460-48104731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
209, 142
               

               
Conread position:
               
132-401
               

               
Cow position:
               
chr4:65950763-65950489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
132-416
               

               
Cow position:
               
chr4:52823293-52823578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
132-448
               

               
Cow position:
               
chr4:20843026-20842718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
132-452
               

               
Cow position:
               
chr4:51769212-51768906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 81
               

               
Conread position:
               
132-458
               

               
Cow position:
               
chr4:13941565-13941246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 80
               

               
Conread position:
               
132-466
               

               
Cow position:
               
chr4:59277370-59277700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
132-469
               

               
Cow position:
               
chr4:19700204-19699877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
178, 78
               

               
Conread position:
               
132-471
               

               
Cow position:
               
chr4:24810342-24810672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
132-473
               

               
Cow position:
               
chr4:19238326-19238012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
132-473
               

               
Cow position:
               
chr4:27755195-27755528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 148
               

               
Conread position:
               
132-473
               

               
Cow position:
               
chr4:56591146-56590803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
132-478
               

               
Cow position:
               
chr4:48486105-48485768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 173
               

               
Conread position:
               
132-478
               

               
Cow position:
               
chr4:62983451-62983786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
132-482
               

               
Cow position:
               
chr4:8133432-8133770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
150, 25
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:203036-203386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 50
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:508800-509138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 193
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:3837384-3837039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 201
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:4085002-4085376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 307
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:11187557-11187219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:11871812-11872152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 132
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:11897197-11897539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 65
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:12676906-12676572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 15
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:13668513-13668857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 281
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:19597215-19597554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:22073215-22073550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
179, 98
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:28771958-28772307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
153, 179
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:30574569-30574216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:32726333-32725982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 152
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:37343231-37342877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:45662404-45662740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:46061050-46060706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 26
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:46597477-46597142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:47730973-47730622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 210
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:53100910-53100565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
146, 192
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:60897174-60897513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr4:68387901-68387551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
152, 102
               

               
Conread position:
               
133-268
               

               
Cow position:
               
chr4:19539129-19539264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-283
               

               
Cow position:
               
chr4:32561936-32561787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
133-287
               

               
Cow position:
               
chr4:61926583-61926737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
133-329
               

               
Cow position:
               
chr4:19573393-19573196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
133-331
               

               
Cow position:
               
chr4:44772935-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr4:46136857-46136644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
178, 23
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr4:37675721-37675505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 80
               

               
Conread position:
               
133-354
               

               
Cow position:
               
chr4:12901450-12901669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
144, 159
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr4:16513416-16513636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 147
               

               
Conread position:
               
133-367
               

               
Cow position:
               
chr4:14500136-14500381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 190
               

               
Conread position:
               
133-367
               

               
Cow position:
               
chr4:59873536-59873303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr4:54171735-54171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr4:33091481-33091229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
133-401
               

               
Cow position:
               
chr4:68569540-68569812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
133-412
               

               
Cow position:
               
chr4:54804313-54804600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
133-412
               

               
Cow position:
               
chr4:69543290-69543008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
133-416
               

               
Cow position:
               
chr4:22907612-22907349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
128, 148
               

               
Conread position:
               
133-425
               

               
Cow position:
               
chr4:22713386-22713674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
133-455
               

               
Cow position:
               
chr4:11218859-11218545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 98
               

               
Conread position:
               
133-459
               

               
Cow position:
               
chr4:31505916-31506243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 233
               

               
Conread position:
               
133-465
               

               
Cow position:
               
chr4:47351910-47351586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 24
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr4:62317553-62317215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr4:5609987-5610300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
178, 23
               

               
Conread position:
               
133-473
               

               
Cow position:
               
chr4:3388651-3388317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
133-473
               

               
Cow position:
               
chr4:22236374-22236701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
133-478
               

               
Cow position:
               
chr4:43894709-43895037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
133-482
               

               
Cow position:
               
chr4:10968281-10968621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
146, 80
               

               
Conread position:
               
133-483
               

               
Cow position:
               
chr4:4319043-4319387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
133-484
               

               
Cow position:
               
chr4:27276436-27276778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 126
               

               
Conread position:
               
133-485
               

               
Cow position:
               
chr4:10915729-10916080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:11194293-11193942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 77
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:13590192-13589849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:15871625-15871963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:18255960-18255623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:19321970-19322319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 233
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:22138113-22138476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 246
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:23526801-23526457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:24001860-24002209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:25197386-25197738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:41441673-41441325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:58248509-58248167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 80
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:63964883-63965231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 65
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr4:68076432-68076769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
174, 23
               

               
Conread position:
               
134-323
               

               
Cow position:
               
chr4:1978-1786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
134-349
               

               
Cow position:
               
chr4:45595925-45596140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
134-368
               

               
Cow position:
               
chr4:15134092-15134339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr4:18756541-18756288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
141, 171
               

               
Conread position:
               
134-472
               

               
Cow position:
               
chr4:1015176-1014841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
134-485
               

               
Cow position:
               
chr4:6208566-6208228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
134-485
               

               
Cow position:
               
chr4:49158688-49159023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
134-486
               

               
Cow position:
               
chr4:18439463-18439813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
134-486
               

               
Cow position:
               
chr4:25973004-25972659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
149, 51
               

               
Conread position:
               
134-486
               

               
Cow position:
               
chr4:31023551-31023201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
134-486
               

               
Cow position:
               
chr4:34210140-34209786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 106
               

               
Conread position:
               
134-486
               

               
Cow position:
               
chr4:46476839-46477179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 215
               

               
Conread position:
               
134-486
               

               
Cow position:
               
chr4:55395868-55395528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
134-486
               

               
Cow position:
               
chr4:66256793-66256447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
135-247
               

               
Cow position:
               
chr4:13140991-13141100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
135-252
               

               
Cow position:
               
chr4:45261941-45262059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
135-267
               

               
Cow position:
               
chr4:19456581-19456713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-273
               

               
Cow position:
               
chr4:10958847-10958705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
135-274
               

               
Cow position:
               
chr4:47305183-47305044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
135-276
               

               
Cow position:
               
chr4:19256799-19256660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
135-295
               

               
Cow position:
               
chr4:12442000-12441840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
135-295
               

               
Cow position:
               
chr4:13241730-13241570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
135-304
               

               
Cow position:
               
chr4:35638797-35638963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
164, 139
               

               
Conread position:
               
135-350
               

               
Cow position:
               
chr4:45013072-45013275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
166, 18
               

               
Conread position:
               
135-352
               

               
Cow position:
               
chr4:13026407-13026189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 18
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr4:12473952-12473727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
135-364
               

               
Cow position:
               
chr4:55508141-55508365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 117
               

               
Conread position:
               
135-367
               

               
Cow position:
               
chr4:22546736-22546965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 40
               

               
Conread position:
               
135-387
               

               
Cow position:
               
chr4:4827235-4826980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 160
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr4:52088031-52087788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
135-393
               

               
Cow position:
               
chr4:51605508-51605759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
150, 28
               

               
Conread position:
               
135-395
               

               
Cow position:
               
chr4:9925523-9925785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr4:47510490-47510230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
135-401
               

               
Cow position:
               
chr4:7704219-7704479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
140, 183
               

               
Conread position:
               
135-406
               

               
Cow position:
               
chr4:39617070-39616824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
135-406
               

               
Cow position:
               
chr4:45685563-45685304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 139
               

               
Conread position:
               
135-409
               

               
Cow position:
               
chr4:10379217-10378941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 236
               

               
Conread position:
               
135-411
               

               
Cow position:
               
chr4:34369344-34369622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 218
               

               
Conread position:
               
135-412
               

               
Cow position:
               
chr4:20147289-20147015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 140
               

               
Conread position:
               
135-415
               

               
Cow position:
               
chr4:20127954-20128227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
135-415
               

               
Cow position:
               
chr4:41370833-41371113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 225
               

               
Conread position:
               
135-425
               

               
Cow position:
               
chr4:33096876-33097159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
135-425
               

               
Cow position:
               
chr4:66547662-66547950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 194
               

               
Conread position:
               
135-428
               

               
Cow position:
               
chr4:11271988-11272279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
135-432
               

               
Cow position:
               
chr4:61148721-61148403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 81
               

               
Conread position:
               
135-453
               

               
Cow position:
               
chr4:13284485-13284169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
135-472
               

               
Cow position:
               
chr4:22860605-22860932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
135-472
               

               
Cow position:
               
chr4:37344323-37344659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
135-478
               

               
Cow position:
               
chr4:63459117-63459448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
135-480
               

               
Cow position:
               
chr4:243336-242991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
135-482
               

               
Cow position:
               
chr4:20157311-20157648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
135-482
               

               
Cow position:
               
chr4:26401061-26400720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 69
               

               
Conread position:
               
135-482
               

               
Cow position:
               
chr4:65815602-65815928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
135-482
               

               
Cow position:
               
chr4:65841662-65841998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
135-485
               

               
Cow position:
               
chr4:10732329-10731979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 227
               

               
Conread position:
               
135-485
               

               
Cow position:
               
chr4:45589495-45589827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:1985753-1985409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
140, 204
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:3850657-3850312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 213
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:8770203-8769869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:9444581-9444930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 218
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:18095568-18095919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 96
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:19097393-19097051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
151, 81
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:20327603-20327955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:25370210-25369876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:27997793-27997445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
140, 228
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:29291620-29291282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 98
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:33970791-33971136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
97, 143
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:34209040-34208688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
140, 23
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:34310354-34310695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 21
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:34641621-34641969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:36813484-36813132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:36893465-36893113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 164
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:40823007-40823355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
140, 188
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:41867541-41867204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 31
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:44451626-44451291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:45367845-45367493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 287
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:49794765-49794439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:51728185-51727844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 230
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:52226108-52225769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:56570912-56570564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 154
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:59785428-59785077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 231
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:61624481-61624831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
140, 75
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr4:64040221-64039868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 120
               

               
Conread position:
               
136-309
               

               
Cow position:
               
chr4:4277570-4277739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
146, 73
               

               
Conread position:
               
136-309
               

               
Cow position:
               
chr4:45706144-45705976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
136-309
               

               
Cow position:
               
chr4:66380234-66380412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
136-319
               

               
Cow position:
               
chr4:20558464-20558282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
136-325
               

               
Cow position:
               
chr4:63471970-63472160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
136-329
               

               
Cow position:
               
chr4:64657198-64657386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
136-381
               

               
Cow position:
               
chr4:68430244-68430005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
174, 21
               

               
Conread position:
               
136-388
               

               
Cow position:
               
chr4:54927335-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
139, 194
               

               
Conread position:
               
136-448
               

               
Cow position:
               
chr4:13344643-13344339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
150, 171
               

               
Conread position:
               
136-451
               

               
Cow position:
               
chr4:16594187-16593878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 96
               

               
Conread position:
               
136-472
               

               
Cow position:
               
chr4:10999610-10999930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 120
               

               
Conread position:
               
136-473
               

               
Cow position:
               
chr4:5460757-5461087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 20
               

               
Conread position:
               
136-480
               

               
Cow position:
               
chr4:68764620-68764283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 47
               

               
Conread position:
               
136-482
               

               
Cow position:
               
chr4:21017-20686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 138
               

               
Conread position:
               
136-482
               

               
Cow position:
               
chr4:62920766-62921093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
136-485
               

               
Cow position:
               
chr4:46591772-46591420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 226
               

               
Conread position:
               
136-486
               

               
Cow position:
               
chr4:4084345-4084686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 176
               

               
Conread position:
               
136-486
               

               
Cow position:
               
chr4:36731295-36730950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 134
               

               
Conread position:
               
136-486
               

               
Cow position:
               
chr4:53126216-53125897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 77
               

               
Conread position:
               
137-276
               

               
Cow position:
               
chr4:3268261-3268398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
137-287
               

               
Cow position:
               
chr4:38350095-38350246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
137-387
               

               
Cow position:
               
chr4:37313269-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
143, 76
               

               
Conread position:
               
137-410
               

               
Cow position:
               
chr4:16881257-16881531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
137-467
               

               
Cow position:
               
chr4:48152271-48152589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
148, 73
               

               
Conread position:
               
137-482
               

               
Cow position:
               
chr4:65650030-65650361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
137-485
               

               
Cow position:
               
chr4:6653825-6653496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 19
               

               
Conread position:
               
137-486
               

               
Cow position:
               
chr4:3341056-3340711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
138, 226
               

               
Conread position:
               
137-486
               

               
Cow position:
               
chr4:12903925-12903578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
137-486
               

               
Cow position:
               
chr4:21874906-21874590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
170, 120
               

               
Conread position:
               
138-444
               

               
Cow position:
               
chr4:27344576-27344869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
139-486
               

               
Cow position:
               
chr4:27665115-27664765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 129
               

               
Conread position:
               
140-352
               

               
Cow position:
               
chr4:68889460-68889670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
127, 167
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr4:18107058-18107289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr4:46183514-46183279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
102, 225
               

               
Conread position:
               
140-473
               

               
Cow position:
               
chr4:25356217-25356533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
140-486
               

               
Cow position:
               
chr4:3283346-3283689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 194
               

               
Conread position:
               
140-486
               

               
Cow position:
               
chr4:54468203-54468535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
171, 19
               

               
Conread position:
               
140-486
               

               
Cow position:
               
chr4:65825725-65826095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 253
               

               
Conread position:
               
140-486
               

               
Cow position:
               
chr4:65919709-65919377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
170, 73
               

               
Conread position:
               
141-276
               

               
Cow position:
               
chr4:43542378-43542506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
141-454
               

               
Cow position:
               
chr4:31859363-31859053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
141-482
               

               
Cow position:
               
chr4:51899106-51898767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr4:47348926-47348592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 79
               

               
Conread position:
               
142-412
               

               
Cow position:
               
chr4:48143937-48143655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
142-484
               

               
Cow position:
               
chr4:31348090-31348432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
142-485
               

               
Cow position:
               
chr4:19315909-19316239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 71
               

               
Conread position:
               
143-285
               

               
Cow position:
               
chr4:60363446-60363304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
143-314
               

               
Cow position:
               
chr4:26830804-26830628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
143-315
               

               
Cow position:
               
chr4:26012498-26012321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
143-328
               

               
Cow position:
               
chr4:19292819-19292631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
143-364
               

               
Cow position:
               
chr4:45074157-45073939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
143-445
               

               
Cow position:
               
chr4:54111839-54111544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
143-473
               

               
Cow position:
               
chr4:13256175-13255866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
143-473
               

               
Cow position:
               
chr4:34337174-34337497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
143-482
               

               
Cow position:
               
chr4:37691214-37691544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 151
               

               
Conread position:
               
143-482
               

               
Cow position:
               
chr4:61897437-61897775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 220
               

               
Conread position:
               
143-485
               

               
Cow position:
               
chr4:16736615-16736264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr4:7430418-7430078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr4:22009960-22010299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr4:39231426-39231763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr4:42921762-42922086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr4:44496468-44496144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr4:52748360-52748698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr4:59055763-59056080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 90
               

               
Conread position:
               
144-455
               

               
Cow position:
               
chr4:36929406-36929104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
144-486
               

               
Cow position:
               
chr4:5999098-5999434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
144-486
               

               
Cow position:
               
chr4:23646765-23647083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 32
               

               
Conread position:
               
144-486
               

               
Cow position:
               
chr4:25984317-25983988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr4:34022489-34022756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 219
               

               
Conread position:
               
145-485
               

               
Cow position:
               
chr4:38952649-38952319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
134, 218
               

               
Conread position:
               
146-486
               

               
Cow position:
               
chr4:31004314-31004645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 142
               

               
Conread position:
               
147-282
               

               
Cow position:
               
chr4:64029204-64029077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
147-361
               

               
Cow position:
               
chr4:19430458-19430239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
147-472
               

               
Cow position:
               
chr4:41602944-41602622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 176
               

               
Conread position:
               
147-482
               

               
Cow position:
               
chr4:13142473-13142768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
147-485
               

               
Cow position:
               
chr4:14470478-14470810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
147-486
               

               
Cow position:
               
chr4:22344928-22345255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
148-486
               

               
Cow position:
               
chr4:34630991-34630661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 213
               

               
Conread position:
               
148-486
               

               
Cow position:
               
chr4:54455250-54455584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 65
               

               
Conread position:
               
149-472
               

               
Cow position:
               
chr4:31172762-31172444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
149-473
               

               
Cow position:
               
chr4:17111782-17112104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
138, 59
               

               
Conread position:
               
149-478
               

               
Cow position:
               
chr4:13693580-13693910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 221
               

               
Conread position:
               
149-480
               

               
Cow position:
               
chr4:30974425-30974102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 64
               

               
Conread position:
               
149-486
               

               
Cow position:
               
chr4:5798056-5797733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
149-486
               

               
Cow position:
               
chr4:9846004-9845681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
149-486
               

               
Cow position:
               
chr4:33395606-33395930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 164
               

               
Conread position:
               
149-486
               

               
Cow position:
               
chr4:38999515-38999186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
151-486
               

               
Cow position:
               
chr4:10992113-10992443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
151-486
               

               
Cow position:
               
chr4:22249361-22249686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
151-486
               

               
Cow position:
               
chr4:22528299-22528628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
152-450
               

               
Cow position:
               
chr4:28543527-28543805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
153-486
               

               
Cow position:
               
chr4:20139429-20139760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 44
               

               
Conread position:
               
153-486
               

               
Cow position:
               
chr4:21257036-21257369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 184
               

               
Conread position:
               
155-413
               

               
Cow position:
               
chr4:22741330-22741583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
156-472
               

               
Cow position:
               
chr4:22842430-22842122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
156-486
               

               
Cow position:
               
chr4:62771835-62772174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 205
               

               
Conread position:
               
156-486
               

               
Cow position:
               
chr4:65432235-65431905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 207
               

               
Conread position:
               
157-486
               

               
Cow position:
               
chr4:36755824-36755510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 74
               

               
Conread position:
               
157-486
               

               
Cow position:
               
chr4:59008271-59008610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 101
               

               
Conread position:
               
158-416
               

               
Cow position:
               
chr4:46393520-46393264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
128, 181
               

               
Conread position:
               
158-482
               

               
Cow position:
               
chr4:11021568-11021886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
120, 205
               

               
Conread position:
               
158-486
               

               
Cow position:
               
chr4:9795301-9795611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
158-486
               

               
Cow position:
               
chr4:14743334-14743019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
159-486
               

               
Cow position:
               
chr4:26373594-26373910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
152, 15
               

               
Conread position:
               
160-410
               

               
Cow position:
               
chr4:33030630-33030384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
160-472
               

               
Cow position:
               
chr4:65406290-65406588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
160-486
               

               
Cow position:
               
chr4:12697718-12697407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
160-486
               

               
Cow position:
               
chr4:22115685-22115366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
160-486
               

               
Cow position:
               
chr4:44665292-44665607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr4:51730030-51729834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr4:53346407-53346174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
57, 153
               

               
Conread position:
               
161-466
               

               
Cow position:
               
chr4:34165895-34166195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
161-469
               

               
Cow position:
               
chr4:23311185-23311489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
146, 30
               

               
Conread position:
               
161-486
               

               
Cow position:
               
chr4:620055-620394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
161-486
               

               
Cow position:
               
chr4:16799106-16799433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 263
               

               
Conread position:
               
161-486
               

               
Cow position:
               
chr4:45919113-45918790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
162-360
               

               
Cow position:
               
chr4:5577132-5577324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 116
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr4:45711441-45711205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
162-482
               

               
Cow position:
               
chr4:58433140-58433447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
162-486
               

               
Cow position:
               
chr4:21232795-21233111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
162-486
               

               
Cow position:
               
chr4:66111991-66112317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
5, 209
               

               
Conread position:
               
163-301
               

               
Cow position:
               
chr4:9825643-9825785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
163-313
               

               
Cow position:
               
chr4:21173923-21173774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 108
               

               
Conread position:
               
165-478
               

               
Cow position:
               
chr4:4672260-4672567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
166-405
               

               
Cow position:
               
chr4:47041354-47041587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
144, 112
               

               
Conread position:
               
166-411
               

               
Cow position:
               
chr4:2885465-2885713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
109, 219
               

               
Conread position:
               
166-481
               

               
Cow position:
               
chr4:55270694-55270995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
144, 105
               

               
Conread position:
               
166-482
               

               
Cow position:
               
chr4:23854255-23853968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
166-485
               

               
Cow position:
               
chr4:9137354-9137035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 99
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr4:10703613-10703925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 143
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr4:21065111-21064798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr4:34171507-34171809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
147, 112
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr4:51739642-51739943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr4:68944107-68944416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
140, 114
               

               
Conread position:
               
168-458
               

               
Cow position:
               
chr4:45952313-45952586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
199, 17
               

               
Conread position:
               
168-486
               

               
Cow position:
               
chr4:26307416-26307740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
103, 143
               

               
Conread position:
               
170-462
               

               
Cow position:
               
chr4:11332168-11331873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 203
               

               
Conread position:
               
170-486
               

               
Cow position:
               
chr4:23568228-23567896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
171-486
               

               
Cow position:
               
chr4:33612289-33612603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 94
               

               
Conread position:
               
172-470
               

               
Cow position:
               
chr4:44973703-44973418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
172-478
               

               
Cow position:
               
chr4:13435806-13435510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr4:24744337-24744649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
114, 199
               

               
Conread position:
               
173-367
               

               
Cow position:
               
chr4:2537261-2537061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 190
               

               
Conread position:
               
173-486
               

               
Cow position:
               
chr4:13043331-13043030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 96
               

               
Conread position:
               
173-486
               

               
Cow position:
               
chr4:19008114-19007803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 172
               

               
Conread position:
               
173-486
               

               
Cow position:
               
chr4:36396062-36396365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
176-469
               

               
Cow position:
               
chr4:65824474-65824182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
131, 44
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:54930357-54930652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
176-486
               

               
Cow position:
               
chr4:7434-7738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
176-486
               

               
Cow position:
               
chr4:25806964-25806659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 128
               

               
Conread position:
               
176-486
               

               
Cow position:
               
chr4:68362986-68362702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
177-485
               

               
Cow position:
               
chr4:25359662-25359372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 96
               

               
Conread position:
               
180-486
               

               
Cow position:
               
chr4:27540680-27540381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 159
               

               
Conread position:
               
181-472
               

               
Cow position:
               
chr4:28613889-28613595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 192
               

               
Conread position:
               
182-412
               

               
Cow position:
               
chr4:59372226-59372442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
182-446
               

               
Cow position:
               
chr4:58903677-58903945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
95, 138
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr4:2894090-2893788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr4:23561449-23561139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 131
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr4:39456098-39455818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
182-484
               

               
Cow position:
               
chr4:21371450-21371157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr4:638059-637757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
106, 127
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr4:12034325-12034023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
153, 96
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr4:19265632-19265332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr4:23564074-23563756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr4:33623772-33623478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr4:42673235-42672931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 176
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr4:49813621-49813907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
129, 95
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr4:51867051-51866755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
184-381
               

               
Cow position:
               
chr4:52307565-52307751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
185-415
               

               
Cow position:
               
chr4:9571111-9570876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
185-456
               

               
Cow position:
               
chr4:66118477-66118737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 84
               

               
Conread position:
               
185-463
               

               
Cow position:
               
chr4:39767406-39767128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
185-473
               

               
Cow position:
               
chr4:10037472-10037183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
185-486
               

               
Cow position:
               
chr4:51903661-51903362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
185-486
               

               
Cow position:
               
chr4:57584186-57584467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 179
               

               
Conread position:
               
187-486
               

               
Cow position:
               
chr4:17474493-17474195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 223
               

               
Conread position:
               
187-486
               

               
Cow position:
               
chr4:19549048-19548757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
187-486
               

               
Cow position:
               
chr4:26549536-26549222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 194
               

               
Conread position:
               
189-486
               

               
Cow position:
               
chr4:123158-123441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
190-394
               

               
Cow position:
               
chr4:38705722-38705927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
190-416
               

               
Cow position:
               
chr4:44676244-44676022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
190-472
               

               
Cow position:
               
chr4:44956131-44956416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 172
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr4:11004683-11004957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
190-485
               

               
Cow position:
               
chr4:15623901-15623601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 252
               

               
Conread position:
               
190-486
               

               
Cow position:
               
chr4:3440452-3440166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
190-486
               

               
Cow position:
               
chr4:19142327-19142048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
153, 84
               

               
Conread position:
               
190-486
               

               
Cow position:
               
chr4:29237119-29237390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
190-486
               

               
Cow position:
               
chr4:38799150-38799435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
190-486
               

               
Cow position:
               
chr4:64072304-64072593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
190-486
               

               
Cow position:
               
chr4:67445196-67444905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
120, 101
               

               
Conread position:
               
191-486
               

               
Cow position:
               
chr4:58261100-58261394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
84, 160
               

               
Conread position:
               
192-482
               

               
Cow position:
               
chr4:19497217-19497486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
192-486
               

               
Cow position:
               
chr4:52584308-52584621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
193-446
               

               
Cow position:
               
chr4:3689752-3689508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 106
               

               
Conread position:
               
193-484
               

               
Cow position:
               
chr4:60370778-60371068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
193-486
               

               
Cow position:
               
chr4:16339551-16339833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
193-486
               

               
Cow position:
               
chr4:28172759-28173040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
196-455
               

               
Cow position:
               
chr4:23069888-23070144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 82
               

               
Conread position:
               
198-486
               

               
Cow position:
               
chr4:24688302-24688589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
132, 77
               

               
Conread position:
               
199-355
               

               
Cow position:
               
chr4:7129741-7129898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 18
               

               
Conread position:
               
199-412
               

               
Cow position:
               
chr4:21516961-21517175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
200-480
               

               
Cow position:
               
chr4:285683-285421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
200-486
               

               
Cow position:
               
chr4:35939966-35940252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 169
               

               
Conread position:
               
200-486
               

               
Cow position:
               
chr4:59105784-59106051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
201-486
               

               
Cow position:
               
chr4:33421326-33421602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
204-486
               

               
Cow position:
               
chr4:46176410-46176703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
205-486
               

               
Cow position:
               
chr4:37619852-37620128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 78
               

               
Conread position:
               
205-486
               

               
Cow position:
               
chr4:63119203-63119471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
206-440
               

               
Cow position:
               
chr4:19423415-19423190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
206-482
               

               
Cow position:
               
chr4:14964812-14964544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
206-486
               

               
Cow position:
               
chr4:28399382-28399647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 156
               

               
Conread position:
               
207-481
               

               
Cow position:
               
chr4:19463530-19463255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 154
               

               
Conread position:
               
207-482
               

               
Cow position:
               
chr4:7501903-7501647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
207-485
               

               
Cow position:
               
chr4:17124258-17124528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
209-486
               

               
Cow position:
               
chr4:11201852-11201577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
209-486
               

               
Cow position:
               
chr4:11671484-11671212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 75
               

               
Conread position:
               
209-486
               

               
Cow position:
               
chr4:24187579-24187858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 112
               

               
Conread position:
               
213-485
               

               
Cow position:
               
chr4:53209265-53208996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
216-416
               

               
Cow position:
               
chr4:46720142-46720338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chr4:54658715-54658480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
216-482
               

               
Cow position:
               
chr4:16966354-16966626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
216-486
               

               
Cow position:
               
chr4:3990604-3990865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
216-486
               

               
Cow position:
               
chr4:17660162-17660445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
216-486
               

               
Cow position:
               
chr4:21058351-21058626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
216-486
               

               
Cow position:
               
chr4:24118882-24119149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
216-486
               

               
Cow position:
               
chr4:47290103-47289830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
218-455
               

               
Cow position:
               
chr4:6034065-6034300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
220-486
               

               
Cow position:
               
chr4:61999427-61999694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
222-351
               

               
Cow position:
               
chr4:45749237-45749365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
222-380
               

               
Cow position:
               
chr4:26011869-26011714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
222-411
               

               
Cow position:
               
chr4:54851099-54851289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
222-467
               

               
Cow position:
               
chr4:43749794-43750033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr4:5984027-5984285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr4:19307280-19307015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr4:24458084-24458338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr4:27561416-27561156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr4:49001274-49001541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr4:51630661-51630417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr4:61972444-61972715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
223-356
               

               
Cow position:
               
chr4:42253110-42253245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
223-460
               

               
Cow position:
               
chr4:1035069-1034843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
223-480
               

               
Cow position:
               
chr4:26746501-26746250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 148
               

               
Conread position:
               
223-482
               

               
Cow position:
               
chr4:5629738-5629989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
223-486
               

               
Cow position:
               
chr4:14920012-14919759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 155
               

               
Conread position:
               
223-486
               

               
Cow position:
               
chr4:38181700-38181442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
224-486
               

               
Cow position:
               
chr4:10412399-10412138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
225-361
               

               
Cow position:
               
chr4:7328688-7328827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
225-472
               

               
Cow position:
               
chr4:37553025-37553270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
225-473
               

               
Cow position:
               
chr4:46501360-46501127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
225-486
               

               
Cow position:
               
chr4:2422592-2422342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
225-486
               

               
Cow position:
               
chr4:20299291-20299030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 145
               

               
Conread position:
               
225-486
               

               
Cow position:
               
chr4:44024803-44025058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
226-410
               

               
Cow position:
               
chr4:33869670-33869493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
226-425
               

               
Cow position:
               
chr4:42347264-42347467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
226-432
               

               
Cow position:
               
chr4:30929617-30929405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
226-482
               

               
Cow position:
               
chr4:22849701-22849946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
226-482
               

               
Cow position:
               
chr4:30690730-30690488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
226-486
               

               
Cow position:
               
chr4:52166836-52167085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
226-486
               

               
Cow position:
               
chr4:65538402-65538648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
227-469
               

               
Cow position:
               
chr4:27687941-27687700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
227-486
               

               
Cow position:
               
chr4:479994-480247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
227-486
               

               
Cow position:
               
chr4:11901547-11901803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 74
               

               
Conread position:
               
227-486
               

               
Cow position:
               
chr4:19558732-19558486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
228-366
               

               
Cow position:
               
chr4:60215442-60215587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
228-482
               

               
Cow position:
               
chr4:52631951-52632206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 196
               

               
Conread position:
               
228-486
               

               
Cow position:
               
chr4:19438478-19438218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
228-486
               

               
Cow position:
               
chr4:33357949-33357691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
231-367
               

               
Cow position:
               
chr4:16070978-16071112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
231-406
               

               
Cow position:
               
chr4:5047330-5047501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
231-482
               

               
Cow position:
               
chr4:23059986-23060239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
231-482
               

               
Cow position:
               
chr4:53999500-53999743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
231-485
               

               
Cow position:
               
chr4:56233692-56233448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
231-485
               

               
Cow position:
               
chr4:65730910-65731159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
231-486
               

               
Cow position:
               
chr4:16637594-16637839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 96
               

               
Conread position:
               
231-486
               

               
Cow position:
               
chr4:19561690-19561454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
231-486
               

               
Cow position:
               
chr4:27511275-27511031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
231-486
               

               
Cow position:
               
chr4:43495907-43495661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
231-486
               

               
Cow position:
               
chr4:48137922-48137669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 139
               

               
Conread position:
               
231-486
               

               
Cow position:
               
chr4:61214985-61215238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 182
               

               
Conread position:
               
232-468
               

               
Cow position:
               
chr4:34924681-34924915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
232-485
               

               
Cow position:
               
chr4:19542804-19542557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
232-486
               

               
Cow position:
               
chr4:54975305-54975068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
233-418
               

               
Cow position:
               
chr4:69386095-69385916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
176, 78
               

               
Conread position:
               
233-486
               

               
Cow position:
               
chr4:22215645-22215895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
234-405
               

               
Cow position:
               
chr4:68855653-68855488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
234-472
               

               
Cow position:
               
chr4:63859880-63860107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
234-478
               

               
Cow position:
               
chr4:56435811-56435573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
234-482
               

               
Cow position:
               
chr4:53546036-53545793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
234-486
               

               
Cow position:
               
chr4:43369839-43370090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
234-486
               

               
Cow position:
               
chr4:46275185-46274953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
235-371
               

               
Cow position:
               
chr4:26683680-26683542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
235-385
               

               
Cow position:
               
chr4:61451243-61451087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
235-462
               

               
Cow position:
               
chr4:36725047-36724826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
235-484
               

               
Cow position:
               
chr4:275469-275222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
235-486
               

               
Cow position:
               
chr4:11090702-11090927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
235-486
               

               
Cow position:
               
chr4:56410184-56409942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
237-473
               

               
Cow position:
               
chr4:10016599-10016829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
167, 51
               

               
Conread position:
               
239-486
               

               
Cow position:
               
chr4:65891995-65891751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
5, 153
               

               
Conread position:
               
241-482
               

               
Cow position:
               
chr4:13371954-13371707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 119
               

               
Conread position:
               
241-486
               

               
Cow position:
               
chr4:1915578-1915818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
242-480
               

               
Cow position:
               
chr4:41907802-41908026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
242-486
               

               
Cow position:
               
chr4:14513244-14513481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
243-450
               

               
Cow position:
               
chr4:568899-568691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
243-483
               

               
Cow position:
               
chr4:53833044-53832808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr4:63365373-63365593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
245-468
               

               
Cow position:
               
chr4:61869842-61870064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr4:1237118-1237356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
247-486
               

               
Cow position:
               
chr4:43909739-43909512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
248-486
               

               
Cow position:
               
chr4:561394-561160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
248-486
               

               
Cow position:
               
chr4:2141743-2141505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 127
               

               
Conread position:
               
248-486
               

               
Cow position:
               
chr4:18576777-18577016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
256-486
               

               
Cow position:
               
chr4:62411866-62411632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
263-486
               

               
Cow position:
               
chr4:57931888-57931670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
268-486
               

               
Cow position:
               
chr4:40410155-40410360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
268-486
               

               
Cow position:
               
chr4:44072795-44073010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
269-486
               

               
Cow position:
               
chr4:22744288-22744081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
269-486
               

               
Cow position:
               
chr4:23570775-23570557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
14, 152
               

               
Conread position:
               
269-486
               

               
Cow position:
               
chr4:54667717-54667931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
270-486
               

               
Cow position:
               
chr4:54501480-54501689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
271-485
               

               
Cow position:
               
chr4:65168039-65168248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
274-418
               

               
Cow position:
               
chr4:28068380-28068519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
274-486
               

               
Cow position:
               
chr4:61271663-61271874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
275-484
               

               
Cow position:
               
chr4:39009930-39009727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:57555930-57555730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
281-486
               

               
Cow position:
               
chr4:23555215-23555011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
281-486
               

               
Cow position:
               
chr4:43763012-43762801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 134
               

               
Conread position:
               
282-482
               

               
Cow position:
               
chr4:46258444-46258249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
283-486
               

               
Cow position:
               
chr4:61391248-61391444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
284-482
               

               
Cow position:
               
chr4:43295738-43295928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
284-486
               

               
Cow position:
               
chr4:22259470-22259657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
284-486
               

               
Cow position:
               
chr4:46370771-46370570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
285-486
               

               
Cow position:
               
chr4:67392914-67392729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
286-486
               

               
Cow position:
               
chr4:27292002-27292199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
286-486
               

               
Cow position:
               
chr4:49212760-49212961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
287-486
               

               
Cow position:
               
chr4:12259828-12260021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
287-486
               

               
Cow position:
               
chr4:46708572-46708769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
289-406
               

               
Cow position:
               
chr4:63077326-63077442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
290-478
               

               
Cow position:
               
chr4:14352721-14352912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
290-486
               

               
Cow position:
               
chr4:42232608-42232424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
290-486
               

               
Cow position:
               
chr4:53447718-53447906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
292-478
               

               
Cow position:
               
chr4:16091451-16091632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
294-486
               

               
Cow position:
               
chr4:5850382-5850572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
296-486
               

               
Cow position:
               
chr4:21064061-21064244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
296-486
               

               
Cow position:
               
chr4:56852847-56852657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
299-486
               

               
Cow position:
               
chr4:26163032-26163210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
303-456
               

               
Cow position:
               
chr4:29842824-29842675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
303-482
               

               
Cow position:
               
chr4:62567348-62567170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
306-484
               

               
Cow position:
               
chr4:13141275-13141456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
309-486
               

               
Cow position:
               
chr4:7249639-7249809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
311-486
               

               
Cow position:
               
chr4:23573478-23573301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
314-482
               

               
Cow position:
               
chr4:56514011-56514175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
315-481
               

               
Cow position:
               
chr4:51083434-51083597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
321-464
               

               
Cow position:
               
chr4:13608162-13608023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
321-486
               

               
Cow position:
               
chr4:3251614-3251776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
322-486
               

               
Cow position:
               
chr4:10472140-10471983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
323-486
               

               
Cow position:
               
chr4:2536747-2536593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
328-486
               

               
Cow position:
               
chr4:33062824-33062670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
329-482
               

               
Cow position:
               
chr4:53763206-53763354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
329-486
               

               
Cow position:
               
chr4:41292066-41292220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
338-486
               

               
Cow position:
               
chr4:22072769-22072913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
339-473
               

               
Cow position:
               
chr4:19430221-19430089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
341-486
               

               
Cow position:
               
chr4:40576021-40576157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
341-486
               

               
Cow position:
               
chr4:52177232-52177380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
345-482
               

               
Cow position:
               
chr4:69018264-69018131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
346-486
               

               
Cow position:
               
chr4:46385679-46385818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
348-486
               

               
Cow position:
               
chr4:55508523-55508656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
361-482
               

               
Cow position:
               
chr4:61969753-61969874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.