Cow genome map

Conread name: unkn-MI-P-NA-aeq-c-03-1-UM.s1

Conread position: 1-184
Cow position: chr16:25171696-25171518 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 113

Conread position: 1-191
Cow position: chr16:41570624-41570441 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 1-229
Cow position: chr16:41755113-41755330 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 220, 37

Conread position: 1-373
Cow position: chr16:49234284-49234666 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 19, 121

Conread position: 1-445
Cow position: chr16:25258299-25257851 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 311
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 19, 178

Conread position: 1-447
Cow position: chr16:1567106-1567540 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 99

Conread position: 1-447
Cow position: chr16:25342316-25341871 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 122

Conread position: 2-185
Cow position: chr16:10565414-10565590 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 35

Conread position: 2-386
Cow position: chr16:16270795-16271155 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 5-447
Cow position: chr16:31591577-31592000 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 118

Conread position: 7-447
Cow position: chr16:14665469-14665899 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 116

Conread position: 8-256
Cow position: chr16:23801776-23802016 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 116

Conread position: 8-447
Cow position: chr16:25441968-25441539 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 8-460
Cow position: chr16:29089956-29090383 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 66

Conread position: 9-447
Cow position: chr16:8815767-8816192 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 114

Conread position: 9-447
Cow position: chr16:10375262-10375686 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 300
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 229, 114

Conread position: 10-175
Cow position: chr16:12537589-12537749 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 115

Conread position: 10-432
Cow position: chr16:26664088-26663680 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 10-447
Cow position: chr16:2410628-2411054 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 108

Conread position: 10-447
Cow position: chr16:10438590-10438149 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 10-447
Cow position: chr16:15477179-15476754 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 11-407
Cow position: chr16:15185409-15185031 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 112

Conread position: 14-447
Cow position: chr16:28437058-28437473 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 109

Conread position: 168-447
Cow position: chr16:25171553-25171263 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 186-447
Cow position: chr16:23535706-23535977 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 203, 97

Conread position: 186-447
Cow position: chr16:40295991-40296264 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 93, 0

Conread position: 186-460
Cow position: chr16:30049673-30049384 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 190-434
Cow position: chr16:5662024-5661772 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 89, 10

Conread position: 190-447
Cow position: chr16:4302160-4302427 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 10

Conread position: 190-447
Cow position: chr16:11283490-11283222 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 10

Conread position: 190-447
Cow position: chr16:28170191-28170459 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 10

Conread position: 190-447
Cow position: chr16:28377398-28377130 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 10

Conread position: 190-447
Cow position: chr16:41162892-41163156 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 192, 10

Conread position: 190-451
Cow position: chr16:28197497-28197765 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 89, 10

Conread position: 190-453
Cow position: chr16:21185794-21185521 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 89, 10

Conread position: 196-460
Cow position: chr16:17057085-17057354 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 42

Conread position: 200-447
Cow position: chr16:49256050-49256291 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 45

Conread position: 200-459
Cow position: chr16:29047194-29046923 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 0

Conread position: 204-447
Cow position: chr16:29034218-29033966 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 77, 0

Conread position: 230-453
Cow position: chr16:26374730-26374498 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 48

Show alignments to all cow chromosomes.