Cow genome map

Conread name: unkn-MI-P-NA-aeq-c-03-1-UM.s1

Conread position: 1-333
Cow position: chr18:27988319-27988009 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 122

Conread position: 1-447
Cow position: chr18:28972756-28973190 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 113

Conread position: 1-447
Cow position: chr18:54170409-54170837 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 122

Conread position: 2-236
Cow position: chr18:36255780-36256006 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 157, 116

Conread position: 3-447
Cow position: chr18:52652038-52651610 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 120

Conread position: 7-453
Cow position: chr18:54023013-54023448 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 116

Conread position: 8-117
Cow position: chr18:46877345-46877451 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 8-120
Cow position: chr18:12236309-12236197 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 17

Conread position: 8-330
Cow position: chr18:16392982-16393315 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 129

Conread position: 8-385
Cow position: chr18:32768777-32768425 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 271, 72

Conread position: 9-365
Cow position: chr18:51482004-51481673 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 114

Conread position: 9-432
Cow position: chr18:32653337-32652928 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 113

Conread position: 9-454
Cow position: chr18:51274926-51275349 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 25

Conread position: 10-388
Cow position: chr18:37507080-37506724 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 10-447
Cow position: chr18:14131512-14131086 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 113

Conread position: 10-447
Cow position: chr18:16175497-16175923 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 10, 113

Conread position: 10-447
Cow position: chr18:23798768-23798341 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 10-447
Cow position: chr18:36509461-36509036 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 117

Conread position: 10-455
Cow position: chr18:41839689-41840123 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 10

Conread position: 11-459
Cow position: chr18:33269939-33269509 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 113

Conread position: 17-172
Cow position: chr18:25364316-25364167 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 144, 93

Conread position: 18-434
Cow position: chr18:33751120-33750725 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 287
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 260, 105

Conread position: 168-466
Cow position: chr18:54271480-54271184 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 50

Conread position: 186-447
Cow position: chr18:14416951-14416678 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 93, 0

Conread position: 186-447
Cow position: chr18:16089107-16088840 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 124

Conread position: 186-460
Cow position: chr18:40725691-40725976 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 190-447
Cow position: chr18:11274145-11274413 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 10

Conread position: 190-447
Cow position: chr18:51462128-51462390 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 193, 10

Conread position: 190-447
Cow position: chr18:51661302-51661038 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 17

Conread position: 190-447
Cow position: chr18:55087959-55088227 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 10

Conread position: 190-459
Cow position: chr18:33952620-33952896 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 89, 10

Conread position: 215-447
Cow position: chr18:24039788-24040032 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 0

Show alignments to all cow chromosomes.