Cow genome map
| Conread name: | unkn-MI-P-NA-aeq-c-03-1-UM.s1 |
| Conread position: | 1-175 |
| Cow position: | chr19:11522034-11522202 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-344 |
| Cow position: | chr19:1656561-1656230 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 95, 151 |
| Conread position: | 1-434 |
| Cow position: | chr19:167443-167887 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 1-447 |
| Cow position: | chr19:173370-172906 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 1-447 |
| Cow position: | chr19:39184406-39184841 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 122 |
| Conread position: | 2-176 |
| Cow position: | chr19:4386752-4386583 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 4-212 |
| Cow position: | chr19:35379715-35379518 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-447 |
| Cow position: | chr19:7489473-7489012 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 118 |
| Conread position: | 7-202 |
| Cow position: | chr19:32181955-32182144 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 8-163 |
| Cow position: | chr19:48861080-48861229 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 8-189 |
| Cow position: | chr19:35384489-35384659 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 8-447 |
| Cow position: | chr19:50723676-50723242 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 270, 114 |
| Conread position: | 9-459 |
| Cow position: | chr19:20105848-20105398 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 114 |
| Conread position: | 11-175 |
| Cow position: | chr19:438316-438475 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 9, 112 |
| Conread position: | 68-472 |
| Cow position: | chr19:40816479-40816892 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 181-434 |
| Cow position: | chr19:39002083-39002345 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 186-447 |
| Cow position: | chr19:33942575-33942302 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 186-457 |
| Cow position: | chr19:892633-892915 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 189-451 |
| Cow position: | chr19:39264-38993 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 189-453 |
| Cow position: | chr19:43144677-43144404 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 190-443 |
| Cow position: | chr19:773563-773296 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 190-447 |
| Cow position: | chr19:7343032-7342764 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 190-447 |
| Cow position: | chr19:32193979-32193711 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 190-466 |
| Cow position: | chr19:5900537-5900816 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 197-460 |
| Cow position: | chr19:32182119-32182399 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 162 |
| Conread position: | 200-466 |
| Cow position: | chr19:53844549-53844272 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 101 |
| Conread position: | 201-447 |
| Cow position: | chr19:342174-341919 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 203-447 |
| Cow position: | chr19:28566970-28567226 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 230-457 |
| Cow position: | chr19:35384822-35385061 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 233-445 |
| Cow position: | chr19:5729752-5729535 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 157, 50 |
Show alignments to all cow chromosomes.