Cow genome map
| Conread name: | unkn-MI-P-NA-aeq-c-03-1-UM.s1 |
| Conread position: | 1-176 |
| Cow position: | chr29:9620462-9620293 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-176 |
| Cow position: | chr29:27262851-27263019 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 1-460 |
| Cow position: | chr29:32891831-32891404 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 2-388 |
| Cow position: | chr29:25931496-25931857 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 2-447 |
| Cow position: | chr29:9642717-9643148 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 307 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 57, 112 |
| Conread position: | 3-447 |
| Cow position: | chr29:6265231-6265664 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 3-447 |
| Cow position: | chr29:45460765-45460332 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 113 |
| Conread position: | 7-388 |
| Cow position: | chr29:23977160-23976803 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 8-176 |
| Cow position: | chr29:41366651-41366814 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 115 |
| Conread position: | 9-164 |
| Cow position: | chr29:34798773-34798922 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 9-433 |
| Cow position: | chr29:27979888-27980298 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 270, 114 |
| Conread position: | 10-385 |
| Cow position: | chr29:32541130-32540778 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 11, 104 |
| Conread position: | 10-447 |
| Cow position: | chr29:14586957-14586533 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 10, 113 |
| Conread position: | 10-459 |
| Cow position: | chr29:39078669-39079107 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 113 |
| Conread position: | 11-164 |
| Cow position: | chr29:19654664-19654516 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 11-437 |
| Cow position: | chr29:5981679-5982088 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 10, 111 |
| Conread position: | 11-454 |
| Cow position: | chr29:4633368-4633791 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 268, 109 |
| Conread position: | 12-443 |
| Cow position: | chr29:14210534-14210949 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 14-218 |
| Cow position: | chr29:8061095-8061293 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 159, 108 |
| Conread position: | 19-453 |
| Cow position: | chr29:32804464-32804049 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 260, 104 |
| Conread position: | 186-447 |
| Cow position: | chr29:5958486-5958216 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 190-447 |
| Cow position: | chr29:669180-669448 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 10 |
| Conread position: | 190-447 |
| Cow position: | chr29:15893971-15894240 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 190-447 |
| Cow position: | chr29:15967983-15968251 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 190-447 |
| Cow position: | chr29:16111256-16110989 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 193, 10 |
| Conread position: | 190-447 |
| Cow position: | chr29:19885945-19885677 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 190-447 |
| Cow position: | chr29:27249465-27249733 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 190-447 |
| Cow position: | chr29:34926356-34926088 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 190-451 |
| Cow position: | chr29:18856070-18856334 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 190-453 |
| Cow position: | chr29:35815097-35815371 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 229-447 |
| Cow position: | chr29:38654807-38655037 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 272-451 |
| Cow position: | chr29:15785162-15785350 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 178 |
Show alignments to all cow chromosomes.