Cow genome map
Conread name: | unkn-MI-P-NA-aeq-c-03-1-UM.s1 |
Conread position: | 1-176 |
Cow position: | chr6:21973657-21973487 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 19, 122 |
Conread position: | 1-387 |
Cow position: | chr6:13316471-13316832 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 1-388 |
Cow position: | chr6:47042198-47042559 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 272 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 19, 122 |
Conread position: | 1-414 |
Cow position: | chr6:38271892-38271506 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 292 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 19, 123 |
Conread position: | 1-447 |
Cow position: | chr6:6567592-6567163 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 121 |
Conread position: | 2-127 |
Cow position: | chr6:69143625-69143501 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 97 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 2-176 |
Cow position: | chr6:51715539-51715370 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 19, 121 |
Conread position: | 2-447 |
Cow position: | chr6:8760288-8760730 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 112 |
Conread position: | 3-379 |
Cow position: | chr6:59918074-59918419 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 259 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 17, 120 |
Conread position: | 3-447 |
Cow position: | chr6:1821624-1822058 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 115 |
Conread position: | 3-447 |
Cow position: | chr6:35875716-35876144 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 386, 119 |
Conread position: | 4-447 |
Cow position: | chr6:27529001-27529432 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 122 |
Conread position: | 5-131 |
Cow position: | chr6:10632554-10632427 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 104 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 5-175 |
Cow position: | chr6:65842621-65842459 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 15, 41 |
Conread position: | 7-111 |
Cow position: | chr6:1535580-1535685 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 86 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 7-172 |
Cow position: | chr6:52694010-52693853 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 8-125 |
Cow position: | chr6:31636419-31636536 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 98 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-176 |
Cow position: | chr6:58027669-58027506 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 123 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 13, 106 |
Conread position: | 8-186 |
Cow position: | chr6:15926589-15926762 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 140 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 152, 115 |
Conread position: | 8-193 |
Cow position: | chr6:17244405-17244582 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 8-343 |
Cow position: | chr6:31565163-31565472 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 244 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 270, 115 |
Conread position: | 8-384 |
Cow position: | chr6:703212-702844 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 66 |
Conread position: | 8-388 |
Cow position: | chr6:3276378-3276736 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 264 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 12, 115 |
Conread position: | 8-399 |
Cow position: | chr6:65940827-65941197 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 260 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 121, 105 |
Conread position: | 8-447 |
Cow position: | chr6:914625-914204 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 88 |
Conread position: | 8-453 |
Cow position: | chr6:28133926-28133504 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 308 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 13, 115 |
Conread position: | 9-175 |
Cow position: | chr6:17047047-17046886 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 11, 115 |
Conread position: | 9-176 |
Cow position: | chr6:43792723-43792883 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 9-388 |
Cow position: | chr6:28169898-28169542 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 112 |
Conread position: | 9-396 |
Cow position: | chr6:56042722-56043088 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 14 |
Conread position: | 10-339 |
Cow position: | chr6:34891130-34891437 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 228 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 10, 108 |
Conread position: | 10-386 |
Cow position: | chr6:15278817-15279166 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 258 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 10, 113 |
Conread position: | 10-391 |
Cow position: | chr6:39438759-39438402 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 268 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 11, 113 |
Conread position: | 10-447 |
Cow position: | chr6:15140183-15140613 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 110 |
Conread position: | 11-447 |
Cow position: | chr6:20560109-20560537 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 109 |
Conread position: | 18-187 |
Cow position: | chr6:34443900-34443736 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 106, 61 |
Conread position: | 186-442 |
Cow position: | chr6:69143471-69143216 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 178 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 209, 14 |
Conread position: | 186-447 |
Cow position: | chr6:8203024-8202751 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 194 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 186-459 |
Cow position: | chr6:3487582-3487865 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 202 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 204, 84 |
Conread position: | 189-447 |
Cow position: | chr6:43999899-43999630 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 190 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 90, 11 |
Conread position: | 190-434 |
Cow position: | chr6:13944744-13944492 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 179 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-434 |
Cow position: | chr6:16052716-16052465 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-444 |
Cow position: | chr6:43618552-43618287 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 184 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-447 |
Cow position: | chr6:185632-185900 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 187 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-447 |
Cow position: | chr6:7140626-7140893 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 190 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-447 |
Cow position: | chr6:27170411-27170149 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 191 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-447 |
Cow position: | chr6:40252497-40252230 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 193 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-447 |
Cow position: | chr6:40275924-40275657 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 187 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 90, 10 |
Conread position: | 190-447 |
Cow position: | chr6:44149720-44149987 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 185 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-455 |
Cow position: | chr6:330630-330905 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 192 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 92, 10 |
Conread position: | 190-459 |
Cow position: | chr6:12665483-12665762 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 197 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 190-462 |
Cow position: | chr6:13847863-13847585 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 196 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 89, 142 |
Conread position: | 191-447 |
Cow position: | chr6:2375534-2375270 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 192 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 47, 9 |
Conread position: | 196-441 |
Cow position: | chr6:40325851-40326108 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 181 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 83, 123 |
Conread position: | 196-460 |
Cow position: | chr6:40316212-40315944 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 189 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 42, 53 |
Conread position: | 200-466 |
Cow position: | chr6:28490740-28491010 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 187 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 7, 135 |
Conread position: | 272-434 |
Cow position: | chr6:69221454-69221625 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 272-447 |
Cow position: | chr6:33488-33301 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 272-447 |
Cow position: | chr6:3048510-3048697 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 134 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 272-447 |
Cow position: | chr6:10498968-10499155 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 272-447 |
Cow position: | chr6:24322625-24322812 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.