Cow genome map

Conread name: unkn-MI-P-NA-afp-h-05-1-UM.s1

Conread position: 1-194
Cow position: chr12:3454886-3454696 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 108

Conread position: 1-199
Cow position: chr12:25456613-25456406 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 115

Conread position: 1-243
Cow position: chr12:23764687-23764440 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 111

Conread position: 1-263
Cow position: chr12:12233066-12232809 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 25

Conread position: 1-268
Cow position: chr12:43974482-43974215 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 113

Conread position: 1-314
Cow position: chr12:35652681-35652984 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 177, 27

Conread position: 1-330
Cow position: chr12:42749632-42749306 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 110

Conread position: 1-331
Cow position: chr12:7110392-7110059 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 20

Conread position: 1-337
Cow position: chr12:34165782-34165440 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 222
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 108, 61

Conread position: 1-358
Cow position: chr12:42784494-42784139 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 177, 79

Conread position: 1-389
Cow position: chr12:25280319-25280692 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 22

Conread position: 1-436
Cow position: chr12:18765755-18766223 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 297

Conread position: 1-492
Cow position: chr12:11836414-11835944 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 27

Conread position: 1-502
Cow position: chr12:30590956-30590467 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 85

Conread position: 1-518
Cow position: chr12:18123853-18123363 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 108

Conread position: 2-162
Cow position: chr12:22894389-22894232 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 46

Conread position: 2-199
Cow position: chr12:2835591-2835400 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 107

Conread position: 2-301
Cow position: chr12:11660113-11659816 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 139, 60

Conread position: 2-332
Cow position: chr12:29674952-29675279 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 21

Conread position: 2-343
Cow position: chr12:17269988-17269646 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 44

Conread position: 2-518
Cow position: chr12:8075493-8076018 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 339
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 148

Conread position: 3-198
Cow position: chr12:4014238-4014435 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 25

Conread position: 3-198
Cow position: chr12:39149862-39150054 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 110

Conread position: 3-198
Cow position: chr12:43551036-43551224 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 18

Conread position: 3-285
Cow position: chr12:21780352-21780071 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 39

Conread position: 3-518
Cow position: chr12:42602051-42602560 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 108

Conread position: 4-187
Cow position: chr12:18978865-18978696 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 174, 19

Conread position: 4-197
Cow position: chr12:583320-583511 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 107

Conread position: 4-243
Cow position: chr12:6206514-6206279 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 29

Conread position: 4-348
Cow position: chr12:24032668-24032343 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 174, 23

Conread position: 4-491
Cow position: chr12:16605485-16605943 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 50, 86

Conread position: 5-259
Cow position: chr12:29966290-29966037 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 108

Conread position: 5-336
Cow position: chr12:19258459-19258133 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 24

Conread position: 5-417
Cow position: chr12:33129436-33129041 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 5-499
Cow position: chr12:7884496-7884960 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 5-518
Cow position: chr12:35310495-35310997 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 110

Conread position: 6-336
Cow position: chr12:16670444-16670119 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 172, 17

Conread position: 6-518
Cow position: chr12:9482122-9482619 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 344
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 21

Conread position: 7-254
Cow position: chr12:36261876-36261624 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 35

Conread position: 7-336
Cow position: chr12:12301107-12300775 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 49, 31

Conread position: 7-430
Cow position: chr12:15163339-15162914 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 297
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 255

Conread position: 8-215
Cow position: chr12:41213997-41214207 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 11

Conread position: 8-347
Cow position: chr12:10942475-10942134 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 104

Conread position: 9-134
Cow position: chr12:7515052-7514924 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 18

Conread position: 9-216
Cow position: chr12:32392105-32391895 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 22

Conread position: 9-234
Cow position: chr12:44861074-44861299 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 106

Conread position: 9-316
Cow position: chr12:7902626-7902928 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 91

Conread position: 9-336
Cow position: chr12:9766702-9767020 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 99

Conread position: 9-518
Cow position: chr12:25561544-25561047 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 10-202
Cow position: chr12:46106968-46106784 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 22, 101

Conread position: 10-215
Cow position: chr12:24396985-24397185 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 101

Conread position: 10-220
Cow position: chr12:22048101-22047897 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 18

Conread position: 10-277
Cow position: chr12:18513748-18514015 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 93

Conread position: 10-518
Cow position: chr12:15089694-15089167 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 109

Conread position: 11-518
Cow position: chr12:27563206-27563701 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 22

Conread position: 13-480
Cow position: chr12:22284951-22285386 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 14-314
Cow position: chr12:14223159-14222852 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 95

Conread position: 14-351
Cow position: chr12:37169775-37170104 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 51, 67

Conread position: 14-356
Cow position: chr12:15050455-15050784 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 164, 13

Conread position: 14-431
Cow position: chr12:29770378-29770810 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 260

Conread position: 14-486
Cow position: chr12:44622534-44622067 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 98

Conread position: 14-495
Cow position: chr12:36500775-36501252 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 326
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 18

Conread position: 14-502
Cow position: chr12:41159757-41159289 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 42

Conread position: 14-517
Cow position: chr12:18021054-18020529 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 271

Conread position: 14-518
Cow position: chr12:15429422-15429924 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 96

Conread position: 14-518
Cow position: chr12:34148165-34148675 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 256

Conread position: 15-257
Cow position: chr12:46491094-46491344 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 148

Conread position: 15-393
Cow position: chr12:17879133-17879505 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 15-507
Cow position: chr12:20479171-20479624 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 333
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 163, 33

Conread position: 15-518
Cow position: chr12:37771029-37770547 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 13

Conread position: 16-501
Cow position: chr12:17031780-17031314 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 12

Conread position: 18-198
Cow position: chr12:4007912-4008089 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 73

Conread position: 20-397
Cow position: chr12:36544478-36544856 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 18

Conread position: 23-195
Cow position: chr12:29762078-29762249 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 69

Conread position: 23-302
Cow position: chr12:3371384-3371654 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 15

Conread position: 23-360
Cow position: chr12:44920223-44919864 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 118

Conread position: 23-384
Cow position: chr12:7000419-7000796 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 32, 15

Conread position: 23-424
Cow position: chr12:24663284-24662885 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 23

Conread position: 23-486
Cow position: chr12:20776764-20777221 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 23-496
Cow position: chr12:34473443-34473915 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 163

Conread position: 23-505
Cow position: chr12:18518837-18518362 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 88

Conread position: 25-338
Cow position: chr12:26576055-26575737 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 31, 79

Conread position: 27-497
Cow position: chr12:30806014-30805552 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 36

Conread position: 28-168
Cow position: chr12:3598550-3598702 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 15

Conread position: 28-214
Cow position: chr12:15832367-15832176 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 110

Conread position: 28-233
Cow position: chr12:26357208-26357413 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 10

Conread position: 28-256
Cow position: chr12:45167849-45168086 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 10

Conread position: 28-262
Cow position: chr12:29057550-29057316 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 83

Conread position: 28-314
Cow position: chr12:19261355-19261074 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 36, 72

Conread position: 28-341
Cow position: chr12:11090604-11090276 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 208

Conread position: 28-396
Cow position: chr12:33976363-33975998 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 83

Conread position: 28-474
Cow position: chr12:30919594-30919152 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 319
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 28, 83

Conread position: 28-500
Cow position: chr12:6410576-6411034 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 47

Conread position: 28-515
Cow position: chr12:17080427-17079936 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 78

Conread position: 28-518
Cow position: chr12:31228743-31228255 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 108

Conread position: 29-214
Cow position: chr12:20355382-20355194 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 79

Conread position: 29-313
Cow position: chr12:24152501-24152216 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 82

Conread position: 31-243
Cow position: chr12:36993936-36994170 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 31-332
Cow position: chr12:23836491-23836181 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 79

Conread position: 31-407
Cow position: chr12:33851513-33851142 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 80

Conread position: 31-454
Cow position: chr12:5635295-5635708 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 85

Conread position: 31-472
Cow position: chr12:42879856-42879429 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 31-501
Cow position: chr12:48415364-48415818 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 7

Conread position: 31-517
Cow position: chr12:18420764-18421249 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 85

Conread position: 32-257
Cow position: chr12:46463895-46464135 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 133

Conread position: 32-501
Cow position: chr12:14131599-14132052 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 318
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 74, 30

Conread position: 33-233
Cow position: chr12:27572055-27572284 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 5

Conread position: 36-518
Cow position: chr12:42967147-42966677 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 54

Conread position: 37-486
Cow position: chr12:8943064-8943512 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 53

Conread position: 37-511
Cow position: chr12:11057017-11056559 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 21

Conread position: 38-356
Cow position: chr12:22485963-22485647 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 20, 77

Conread position: 38-518
Cow position: chr12:9143534-9143068 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 66

Conread position: 39-368
Cow position: chr12:15122474-15122142 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 16, 72

Conread position: 39-507
Cow position: chr12:23574919-23574462 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 318
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 69

Conread position: 39-518
Cow position: chr12:4341586-4342045 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 40-339
Cow position: chr12:46120668-46120979 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 226

Conread position: 40-518
Cow position: chr12:42180980-42181466 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 76

Conread position: 41-214
Cow position: chr12:6480789-6480619 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 59

Conread position: 41-362
Cow position: chr12:15703348-15703669 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 70

Conread position: 41-494
Cow position: chr12:18388140-18388580 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 33

Conread position: 43-241
Cow position: chr12:24186332-24186534 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 95

Conread position: 53-476
Cow position: chr12:42698101-42698506 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 295
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 56, 81

Conread position: 54-269
Cow position: chr12:37256149-37255944 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 54

Conread position: 54-337
Cow position: chr12:45028503-45028205 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 54-499
Cow position: chr12:27562706-27563140 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 302
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 248, 54

Conread position: 54-517
Cow position: chr12:19869609-19869148 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 106

Conread position: 54-518
Cow position: chr12:31960039-31959569 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 168

Conread position: 55-214
Cow position: chr12:42143310-42143139 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 56-368
Cow position: chr12:35124021-35123714 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 52

Conread position: 56-470
Cow position: chr12:30661820-30662226 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 122, 51

Conread position: 56-497
Cow position: chr12:4866943-4866513 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 33

Conread position: 56-518
Cow position: chr12:33323365-33323822 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 57

Conread position: 62-491
Cow position: chr12:4008157-4008580 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 25

Conread position: 90-422
Cow position: chr12:27037340-27037677 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 189

Conread position: 90-497
Cow position: chr12:15531163-15530762 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 80

Conread position: 91-482
Cow position: chr12:32715155-32714753 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 106

Conread position: 92-288
Cow position: chr12:30819351-30819145 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 177

Conread position: 92-491
Cow position: chr12:5906158-5905760 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 93-515
Cow position: chr12:7978141-7977725 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 26

Conread position: 95-486
Cow position: chr12:45820263-45820649 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 97-299
Cow position: chr12:6235389-6235176 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 98-517
Cow position: chr12:2813324-2812904 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 25

Conread position: 100-259
Cow position: chr12:19274304-19274467 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 78, 10

Conread position: 100-482
Cow position: chr12:730841-731213 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 13

Conread position: 101-322
Cow position: chr12:3092482-3092705 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 15

Conread position: 102-489
Cow position: chr12:5631787-5632168 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 8

Conread position: 103-486
Cow position: chr12:6163943-6164321 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 78

Conread position: 107-253
Cow position: chr12:15641018-15641172 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 25

Conread position: 108-253
Cow position: chr12:15260850-15260699 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 24

Conread position: 108-482
Cow position: chr12:26222900-26223273 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 108-492
Cow position: chr12:5714716-5714331 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 26

Conread position: 109-332
Cow position: chr12:44202901-44203125 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 16

Conread position: 109-397
Cow position: chr12:30194789-30194502 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 8

Conread position: 109-493
Cow position: chr12:27802963-27803348 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 110-285
Cow position: chr12:37514195-37514376 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 10

Conread position: 111-486
Cow position: chr12:6488906-6489268 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 96

Conread position: 111-508
Cow position: chr12:12304466-12304089 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 267
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 22

Conread position: 112-392
Cow position: chr12:23855915-23855632 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 13

Conread position: 113-336
Cow position: chr12:24116278-24116510 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 123

Conread position: 114-482
Cow position: chr12:40110456-40110101 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 89

Conread position: 114-502
Cow position: chr12:30170753-30170359 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 149

Conread position: 120-518
Cow position: chr12:30605088-30605481 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 128

Conread position: 121-467
Cow position: chr12:39465656-39465305 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 188

Conread position: 121-518
Cow position: chr12:19691157-19691560 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 280

Conread position: 127-500
Cow position: chr12:43942552-43942174 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 143

Conread position: 127-518
Cow position: chr12:18577909-18577522 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 5

Conread position: 128-412
Cow position: chr12:30210553-30210260 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 147

Conread position: 132-362
Cow position: chr12:19507702-19507460 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 46, 215

Conread position: 132-493
Cow position: chr12:31429506-31429859 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 139

Conread position: 133-497
Cow position: chr12:41084120-41083763 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 72

Conread position: 134-378
Cow position: chr12:6485150-6485395 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 171

Conread position: 134-431
Cow position: chr12:35378264-35377962 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 44, 54

Conread position: 134-483
Cow position: chr12:34465941-34466289 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 122

Conread position: 135-486
Cow position: chr12:25805070-25805402 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 136-447
Cow position: chr12:23798160-23797850 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 119

Conread position: 153-344
Cow position: chr12:6102784-6102981 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 114

Conread position: 159-434
Cow position: chr12:28471685-28471399 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 112

Conread position: 162-509
Cow position: chr12:18550916-18550578 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 93

Conread position: 167-358
Cow position: chr12:18420500-18420302 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 104

Conread position: 182-492
Cow position: chr12:26317479-26317161 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 161

Conread position: 215-431
Cow position: chr12:30476456-30476240 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 40

Conread position: 215-474
Cow position: chr12:29411515-29411768 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 215-479
Cow position: chr12:22047444-22047185 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 133, 27

Conread position: 215-516
Cow position: chr12:4116463-4116183 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 0

Conread position: 217-486
Cow position: chr12:32391820-32391553 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 87, 41

Conread position: 290-486
Cow position: chr12:40307598-40307404 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 93, 0

Conread position: 306-486
Cow position: chr12:4593988-4593803 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 345-515
Cow position: chr12:20260715-20260885 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.