Cow genome map
| Conread name: | unkn-MI-P-NA-afp-h-05-1-UM.s1 |
| Conread position: | 1-134 |
| Cow position: | chr29:2523408-2523272 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 1-207 |
| Cow position: | chr29:35070849-35071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-214 |
| Cow position: | chr29:17022403-17022165 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 1-447 |
| Cow position: | chr29:31489547-31489103 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 1-511 |
| Cow position: | chr29:18878259-18878781 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 31 |
| Conread position: | 2-302 |
| Cow position: | chr29:28840396-28840080 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 56, 272 |
| Conread position: | 2-445 |
| Cow position: | chr29:30441160-30440711 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 314 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 2-472 |
| Cow position: | chr29:27859011-27858550 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 2-518 |
| Cow position: | chr29:20673580-20674095 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 15, 126 |
| Conread position: | 3-197 |
| Cow position: | chr29:8798793-8798980 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 3-474 |
| Cow position: | chr29:11916042-11915573 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 3-518 |
| Cow position: | chr29:45005412-45005903 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 25 |
| Conread position: | 4-467 |
| Cow position: | chr29:19949527-19949073 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 108 |
| Conread position: | 4-486 |
| Cow position: | chr29:31929205-31928724 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 4-517 |
| Cow position: | chr29:10839160-10838664 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 4-518 |
| Cow position: | chr29:23874684-23874169 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 5-283 |
| Cow position: | chr29:31200494-31200201 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 5-342 |
| Cow position: | chr29:5046871-5046538 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 173, 21 |
| Conread position: | 5-418 |
| Cow position: | chr29:9310829-9310437 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 294 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 5-423 |
| Cow position: | chr29:30188111-30188533 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 296 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 50, 206 |
| Conread position: | 5-431 |
| Cow position: | chr29:39329364-39329797 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 5-501 |
| Cow position: | chr29:2623260-2623750 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 147 |
| Conread position: | 5-501 |
| Cow position: | chr29:12680376-12679884 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 6-166 |
| Cow position: | chr29:22705261-22705102 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 6-187 |
| Cow position: | chr29:31942613-31942430 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 6-216 |
| Cow position: | chr29:28949204-28948987 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 7-302 |
| Cow position: | chr29:22518904-22519203 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 7-518 |
| Cow position: | chr29:9709911-9709412 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 88 |
| Conread position: | 7-518 |
| Cow position: | chr29:16609972-16609451 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 8-134 |
| Cow position: | chr29:29176147-29176274 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 8-486 |
| Cow position: | chr29:32963739-32963299 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 20 |
| Conread position: | 8-512 |
| Cow position: | chr29:5063362-5062851 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 9-251 |
| Cow position: | chr29:11527557-11527814 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 9-473 |
| Cow position: | chr29:25475150-25474665 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 127 |
| Conread position: | 9-486 |
| Cow position: | chr29:22613636-22613180 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 9-501 |
| Cow position: | chr29:27668439-27668912 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 9-518 |
| Cow position: | chr29:43080392-43080895 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 335 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 10-410 |
| Cow position: | chr29:25092319-25091929 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 10-501 |
| Cow position: | chr29:16196073-16195582 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 255 |
| Conread position: | 10-518 |
| Cow position: | chr29:16657908-16657404 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 11-213 |
| Cow position: | chr29:19061546-19061758 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 11-385 |
| Cow position: | chr29:12025265-12025629 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 214, 102 |
| Conread position: | 11-437 |
| Cow position: | chr29:36210367-36209958 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 13-130 |
| Cow position: | chr29:34919250-34919367 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-321 |
| Cow position: | chr29:20167635-20167328 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 165, 49 |
| Conread position: | 14-255 |
| Cow position: | chr29:16200263-16200508 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 14-302 |
| Cow position: | chr29:22028750-22029031 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 14-302 |
| Cow position: | chr29:23220279-23220575 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 14-318 |
| Cow position: | chr29:20770554-20770254 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 14-403 |
| Cow position: | chr29:5408931-5409323 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 14-502 |
| Cow position: | chr29:32799490-32799974 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 14-518 |
| Cow position: | chr29:5893057-5892563 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 92 |
| Conread position: | 15-518 |
| Cow position: | chr29:24624449-24623954 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 12 |
| Conread position: | 19-390 |
| Cow position: | chr29:17297344-17296968 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 19-394 |
| Cow position: | chr29:31944070-31943696 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 8 |
| Conread position: | 21-518 |
| Cow position: | chr29:19762468-19761984 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 23-198 |
| Cow position: | chr29:37990785-37990965 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 23-316 |
| Cow position: | chr29:7624367-7624087 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 172, 52 |
| Conread position: | 23-341 |
| Cow position: | chr29:13028652-13028324 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 110 |
| Conread position: | 23-468 |
| Cow position: | chr29:4520535-4520098 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 23-481 |
| Cow position: | chr29:25737218-25737667 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 23-486 |
| Cow position: | chr29:8926248-8926714 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 239 |
| Conread position: | 23-501 |
| Cow position: | chr29:22175892-22175423 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 24-427 |
| Cow position: | chr29:19125531-19125148 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 26-468 |
| Cow position: | chr29:22714512-22714965 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 28-155 |
| Cow position: | chr29:31972479-31972602 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 28-190 |
| Cow position: | chr29:17301968-17301803 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 28-198 |
| Cow position: | chr29:35737120-35737293 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 28-214 |
| Cow position: | chr29:18579622-18579820 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 183 |
| Conread position: | 28-230 |
| Cow position: | chr29:15798148-15797947 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 150, 70 |
| Conread position: | 28-236 |
| Cow position: | chr29:19363905-19363700 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 28-240 |
| Cow position: | chr29:21645514-21645303 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 28-243 |
| Cow position: | chr29:501397-501181 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 28-256 |
| Cow position: | chr29:683261-683522 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 28-257 |
| Cow position: | chr29:36357324-36357097 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 28-261 |
| Cow position: | chr29:19250540-19250308 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 30, 92 |
| Conread position: | 28-265 |
| Cow position: | chr29:22734909-22735145 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 28-282 |
| Cow position: | chr29:23155432-23155174 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 28-370 |
| Cow position: | chr29:11397717-11398066 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 28-423 |
| Cow position: | chr29:26275798-26275421 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 28-485 |
| Cow position: | chr29:40891510-40891956 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 80 |
| Conread position: | 28-490 |
| Cow position: | chr29:11562823-11562355 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 28-501 |
| Cow position: | chr29:12783758-12784226 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 28-511 |
| Cow position: | chr29:1325643-1325161 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 28-515 |
| Cow position: | chr29:28775269-28775738 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 28-518 |
| Cow position: | chr29:17110150-17109681 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 28-518 |
| Cow position: | chr29:19756634-19756161 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 90 |
| Conread position: | 28-518 |
| Cow position: | chr29:40117762-40117280 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 30-198 |
| Cow position: | chr29:2730086-2730257 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 30-231 |
| Cow position: | chr29:34760206-34760419 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 30-496 |
| Cow position: | chr29:42771848-42771397 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 137 |
| Conread position: | 31-498 |
| Cow position: | chr29:40583979-40583530 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 47 |
| Conread position: | 32-283 |
| Cow position: | chr29:30681510-30681766 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 32-471 |
| Cow position: | chr29:26330406-26329974 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 33-511 |
| Cow position: | chr29:21443149-21443624 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 25 |
| Conread position: | 37-220 |
| Cow position: | chr29:27042459-27042284 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 141, 21 |
| Conread position: | 38-214 |
| Cow position: | chr29:36697944-36697772 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 145, 24 |
| Conread position: | 38-217 |
| Cow position: | chr29:935113-934937 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 38-230 |
| Cow position: | chr29:15796671-15796481 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 140, 60 |
| Conread position: | 38-356 |
| Cow position: | chr29:34358792-34359109 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 38-374 |
| Cow position: | chr29:35084036-35084370 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 38-448 |
| Cow position: | chr29:40298809-40299230 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 307 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 20, 235 |
| Conread position: | 38-465 |
| Cow position: | chr29:34744444-34744851 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 38-486 |
| Cow position: | chr29:26779063-26778629 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 39-263 |
| Cow position: | chr29:29324234-29324458 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 40-222 |
| Cow position: | chr29:2533485-2533295 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 168 |
| Conread position: | 40-285 |
| Cow position: | chr29:5994908-5995157 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 140, 8 |
| Conread position: | 40-467 |
| Cow position: | chr29:13639184-13639603 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 138, 14 |
| Conread position: | 41-300 |
| Cow position: | chr29:30548957-30548702 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 137, 68 |
| Conread position: | 42-214 |
| Cow position: | chr29:33393871-33393693 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 44-274 |
| Cow position: | chr29:23825031-23825260 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 50-451 |
| Cow position: | chr29:5109008-5109431 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 53-397 |
| Cow position: | chr29:23243698-23244050 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 54-495 |
| Cow position: | chr29:29057344-29056919 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 67 |
| Conread position: | 54-518 |
| Cow position: | chr29:86836-87304 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 54-518 |
| Cow position: | chr29:38582138-38581682 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 64 |
| Conread position: | 61-301 |
| Cow position: | chr29:8004753-8004995 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 61-419 |
| Cow position: | chr29:4334903-4334536 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 62-424 |
| Cow position: | chr29:9718615-9718966 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 58 |
| Conread position: | 84-515 |
| Cow position: | chr29:39111165-39111593 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 90-422 |
| Cow position: | chr29:32210924-32211251 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 90-516 |
| Cow position: | chr29:10156160-10156574 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 290 |
| Conread position: | 90-517 |
| Cow position: | chr29:13372807-13372380 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 293 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 91-392 |
| Cow position: | chr29:26416494-26416195 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 93-421 |
| Cow position: | chr29:5186348-5186689 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 108-516 |
| Cow position: | chr29:4874755-4875188 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 109-410 |
| Cow position: | chr29:41112757-41113040 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 114-343 |
| Cow position: | chr29:12625859-12626095 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 118-391 |
| Cow position: | chr29:17154897-17154603 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 118-516 |
| Cow position: | chr29:26615603-26616012 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 120-296 |
| Cow position: | chr29:38978644-38978462 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 120-471 |
| Cow position: | chr29:26985338-26984986 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 121-430 |
| Cow position: | chr29:10818340-10818636 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 121-485 |
| Cow position: | chr29:31594033-31594369 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 121-486 |
| Cow position: | chr29:22162139-22162508 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 122-308 |
| Cow position: | chr29:36952189-36952379 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 128-480 |
| Cow position: | chr29:20903184-20903537 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 121 |
| Conread position: | 128-499 |
| Cow position: | chr29:36217218-36216850 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 131-285 |
| Cow position: | chr29:22166976-22167138 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 132-362 |
| Cow position: | chr29:4002993-4002761 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 126 |
| Conread position: | 133-410 |
| Cow position: | chr29:10235034-10235309 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 134-311 |
| Cow position: | chr29:18012657-18012472 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 134-351 |
| Cow position: | chr29:24578961-24578731 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 134-357 |
| Cow position: | chr29:29176518-29176745 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 115 |
| Conread position: | 134-362 |
| Cow position: | chr29:27329990-27329757 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 134-397 |
| Cow position: | chr29:27826618-27826355 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 134-499 |
| Cow position: | chr29:35501555-35501916 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 134-506 |
| Cow position: | chr29:2984989-2984609 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 134-518 |
| Cow position: | chr29:43328743-43328350 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 261 |
| Conread position: | 136-480 |
| Cow position: | chr29:23983858-23984213 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 145 |
| Conread position: | 143-436 |
| Cow position: | chr29:41365199-41364904 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 149-397 |
| Cow position: | chr29:44682019-44682267 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 153-518 |
| Cow position: | chr29:4624919-4625280 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 158-466 |
| Cow position: | chr29:24103466-24103784 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 136 |
| Conread position: | 167-478 |
| Cow position: | chr29:36183347-36183029 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 170-392 |
| Cow position: | chr29:31674696-31674465 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 171-518 |
| Cow position: | chr29:26771501-26771154 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 180 |
| Conread position: | 187-390 |
| Cow position: | chr29:1124700-1124492 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 194-478 |
| Cow position: | chr29:3502606-3502309 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 194-518 |
| Cow position: | chr29:4328449-4328147 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 197-485 |
| Cow position: | chr29:42849257-42848973 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 215-518 |
| Cow position: | chr29:43311782-43312082 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 227-518 |
| Cow position: | chr29:3396106-3395822 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 235-518 |
| Cow position: | chr29:7407895-7408176 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 238-502 |
| Cow position: | chr29:9686011-9686272 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 248-511 |
| Cow position: | chr29:479363-479106 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 294-516 |
| Cow position: | chr29:40902787-40903004 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 0 |
Show alignments to all cow chromosomes.