Cow genome map
| Conread name: | unkn-MI-P-NA-afq-h-05-1-UM.s1 |
| Conread position: | 13-229 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 13-519 |
| Cow position: | |
| Alignm length: | 511 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 56 |
| Conread position: | 18-250 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 18-423 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 140, 48 |
| Conread position: | 18-429 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 18-435 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 288, 17 |
| Conread position: | 18-465 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 18-465 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 300 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 18-465 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 18-465 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 18-465 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 18-481 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 18-487 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 310 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 289, 17 |
| Conread position: | 18-491 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 18-512 |
| Cow position: | |
| Alignm length: | 501 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 18-519 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 344 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 18-519 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 48 |
| Conread position: | 18-523 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 18-530 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 18-530 |
| Cow position: | |
| Alignm length: | 518 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 18-530 |
| Cow position: | |
| Alignm length: | 518 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 19-450 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 19-465 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 19-468 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 19-519 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 339 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 19-519 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 19-519 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 19-523 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 333 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 20-464 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 20-465 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 22-334 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 22-465 |
| Cow position: | |
| Alignm length: | 457 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 22-528 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 350 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 23-476 |
| Cow position: | |
| Alignm length: | 457 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 341, 12 |
| Conread position: | 25-494 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 27-519 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 332 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 27-530 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 29-465 |
| Cow position: | |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 29-481 |
| Cow position: | |
| Alignm length: | 462 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 30-530 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 30-530 |
| Cow position: | |
| Alignm length: | 504 |
| Alignm identity: | 326 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 32-164 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 32-321 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 32-487 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 294 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 32-530 |
| Cow position: | |
| Alignm length: | 504 |
| Alignm identity: | 327 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 33-221 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 34-322 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 34-465 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 49-465 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 135, 17 |
| Conread position: | 56-465 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 295, 10 |
| Conread position: | 60-519 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 80 |
| Conread position: | 64-463 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 66-424 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 260, 85 |
| Conread position: | 82-519 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 58 |
| Conread position: | 103-453 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 147-530 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 159-519 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 12, 105 |
| Conread position: | 169-523 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 169-530 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 273, 92 |
| Conread position: | 173-444 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 175, 84 |
| Conread position: | 175-524 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 183, 18 |
| Conread position: | 180-522 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 195, 58 |
| Conread position: | 183-524 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 156, 78 |
| Conread position: | 191-465 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 140, 66 |
| Conread position: | 194-530 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 63 |
| Conread position: | 195-481 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 249, 65 |
| Conread position: | 195-530 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 202-465 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 112, 55 |
| Conread position: | 203-531 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 176, 43 |
| Conread position: | 206-530 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 125, 27 |
| Conread position: | 239-529 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 267-528 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 378-530 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 11 |
Show alignments to all cow chromosomes.