Cow genome map
Conread name: | unkn-MI-P-NA-afq-h-05-1-UM.s1 |
Conread position: | 14-530 |
Cow position: | chr17:2179496-2179006 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 342 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 38, 21 |
Conread position: | 17-545 |
Cow position: | chr17:16217093-16216580 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 339 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 35, 52 |
Conread position: | 18-178 |
Cow position: | chr17:29810265-29810109 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 154, 17 |
Conread position: | 18-211 |
Cow position: | chr17:40879434-40879242 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 33, 47 |
Conread position: | 18-252 |
Cow position: | chr17:37018993-37018763 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 163 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 33, 17 |
Conread position: | 18-277 |
Cow position: | chr17:32651230-32650975 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 180 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 30, 12 |
Conread position: | 18-289 |
Cow position: | chr17:40802425-40802164 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 185 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 32, 47 |
Conread position: | 18-423 |
Cow position: | chr17:7802197-7802588 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-458 |
Cow position: | chr17:20078017-20078445 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 299 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 33, 17 |
Conread position: | 18-465 |
Cow position: | chr17:2079299-2078862 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 305 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-466 |
Cow position: | chr17:3306248-3305810 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 17 |
Conread position: | 18-489 |
Cow position: | chr17:27791131-27791589 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-499 |
Cow position: | chr17:35547677-35548134 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-519 |
Cow position: | chr17:5638228-5638718 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 18-519 |
Cow position: | chr17:15722246-15721768 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 342 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-523 |
Cow position: | chr17:22563803-22563310 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-523 |
Cow position: | chr17:23337401-23337882 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 333 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-530 |
Cow position: | chr17:16416428-16416921 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 347 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-534 |
Cow position: | chr17:10445817-10445319 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 19-449 |
Cow position: | chr17:31780814-31781224 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 19-452 |
Cow position: | chr17:2081612-2081190 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 16 |
Conread position: | 19-452 |
Cow position: | chr17:34565009-34564583 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 19-519 |
Cow position: | chr17:16505083-16505577 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 19-519 |
Cow position: | chr17:22773793-22774293 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 49 |
Conread position: | 20-304 |
Cow position: | chr17:21646194-21646469 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 194 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 30, 45 |
Conread position: | 20-465 |
Cow position: | chr17:144554-144983 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 306 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 30, 14 |
Conread position: | 20-514 |
Cow position: | chr17:1568558-1569045 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 15 |
Conread position: | 20-519 |
Cow position: | chr17:979523-980015 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 330 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 30, 47 |
Conread position: | 25-451 |
Cow position: | chr17:38788636-38789064 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 38 |
Conread position: | 25-451 |
Cow position: | chr17:38799878-38800306 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 38 |
Conread position: | 25-537 |
Cow position: | chr17:42662927-42663414 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 10 |
Conread position: | 27-465 |
Cow position: | chr17:4298781-4298361 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 309 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 23, 42 |
Conread position: | 27-513 |
Cow position: | chr17:20093513-20093984 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 318 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 25, 42 |
Conread position: | 27-519 |
Cow position: | chr17:18264824-18265304 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 322 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 25, 40 |
Conread position: | 29-530 |
Cow position: | chr17:35619859-35620343 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 328 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 21, 36 |
Conread position: | 30-429 |
Cow position: | chr17:14304100-14304481 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 35 |
Conread position: | 30-461 |
Cow position: | chr17:6082149-6081716 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 295 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 22, 37 |
Conread position: | 30-465 |
Cow position: | chr17:923274-922845 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 38 |
Conread position: | 32-215 |
Cow position: | chr17:42284201-42284381 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 19, 33 |
Conread position: | 32-227 |
Cow position: | chr17:35998518-35998706 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 145 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 32-447 |
Cow position: | chr17:32456799-32457218 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 288 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 18, 35 |
Conread position: | 32-513 |
Cow position: | chr17:43227977-43227508 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 33-463 |
Cow position: | chr17:39612201-39611789 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 285 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 19, 36 |
Conread position: | 33-530 |
Cow position: | chr17:21860167-21860653 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 34 |
Conread position: | 39-465 |
Cow position: | chr17:39748285-39747871 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 11 |
Conread position: | 41-481 |
Cow position: | chr17:6872577-6872992 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 298 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 9, 23 |
Conread position: | 51-465 |
Cow position: | chr17:6263485-6263078 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 271 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 280, 15 |
Conread position: | 64-514 |
Cow position: | chr17:16869687-16870120 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 302 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 108, 27 |
Conread position: | 69-443 |
Cow position: | chr17:24031411-24031047 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 244 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 262, 71 |
Conread position: | 72-430 |
Cow position: | chr17:30281676-30282010 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 237 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 85-524 |
Cow position: | chr17:9753370-9752955 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 288 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 279, 71 |
Conread position: | 91-524 |
Cow position: | chr17:692028-692458 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 292 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 37, 7 |
Conread position: | 92-530 |
Cow position: | chr17:35018919-35018505 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 286 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 238, 51 |
Conread position: | 98-443 |
Cow position: | chr17:14006993-14006660 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 222 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 130, 42 |
Conread position: | 122-519 |
Cow position: | chr17:5671959-5672346 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 262 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 258, 18 |
Conread position: | 143-489 |
Cow position: | chr17:2244530-2244873 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 231 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 188, 119 |
Conread position: | 160-495 |
Cow position: | chr17:29823074-29822742 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 217 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 173, 100 |
Conread position: | 160-535 |
Cow position: | chr17:40416115-40416488 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 253 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 20, 8 |
Conread position: | 166-487 |
Cow position: | chr17:8008101-8007790 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 227 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 165, 91 |
Conread position: | 166-519 |
Cow position: | chr17:24785709-24785360 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 231 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 167, 7 |
Conread position: | 168-465 |
Cow position: | chr17:27052930-27052631 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 199 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 82, 187 |
Conread position: | 173-514 |
Cow position: | chr17:11775925-11775594 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 228 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 67, 52 |
Conread position: | 183-519 |
Cow position: | chr17:18785909-18785590 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 222 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 46, 21 |
Conread position: | 251-522 |
Cow position: | chr17:37701385-37701117 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 178 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 188, 128 |
Conread position: | 274-499 |
Cow position: | chr17:43443075-43443300 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 156 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 57, 79 |
Conread position: | 285-555 |
Cow position: | chr17:23041977-23041715 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 176 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 390-529 |
Cow position: | chr17:30145892-30146032 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 103 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.