Cow genome map
Conread name: | unkn-MI-P-NA-afq-h-05-1-UM.s1 |
Conread position: | 13-426 |
Cow position: | chr25:28327881-28328296 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 275 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 158, 22 |
Conread position: | 13-514 |
Cow position: | chr25:14774712-14774230 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 22 |
Conread position: | 13-518 |
Cow position: | chr25:14755834-14756329 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 22 |
Conread position: | 13-519 |
Cow position: | chr25:16922218-16922708 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 16-530 |
Cow position: | chr25:30162591-30163094 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 18 |
Conread position: | 17-457 |
Cow position: | chr25:20496105-20495691 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 301 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 35, 18 |
Conread position: | 18-207 |
Cow position: | chr25:9178662-9178849 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 136 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 22, 44 |
Conread position: | 18-322 |
Cow position: | chr25:14823168-14823465 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 17 |
Conread position: | 18-452 |
Cow position: | chr25:23739683-23740094 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 301 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-464 |
Cow position: | chr25:7800589-7800154 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 292 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-473 |
Cow position: | chr25:27199513-27199074 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 288 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 162, 26 |
Conread position: | 18-519 |
Cow position: | chr25:8655865-8655374 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-519 |
Cow position: | chr25:9413918-9413429 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-519 |
Cow position: | chr25:10137400-10136895 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 327 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 36, 17 |
Conread position: | 18-519 |
Cow position: | chr25:17658185-17657702 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 12 |
Conread position: | 18-519 |
Cow position: | chr25:23863778-23864292 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 338 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 35, 17 |
Conread position: | 18-523 |
Cow position: | chr25:18424852-18424374 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 337 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-523 |
Cow position: | chr25:18487046-18486537 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 337 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 178, 17 |
Conread position: | 18-562 |
Cow position: | chr25:30525800-30526331 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 19-144 |
Cow position: | chr25:27535370-27535494 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 19-465 |
Cow position: | chr25:36127330-36127771 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 19-519 |
Cow position: | chr25:3688710-3688217 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 19-523 |
Cow position: | chr25:35589644-35589155 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 20-523 |
Cow position: | chr25:24077204-24077684 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 329 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 33, 15 |
Conread position: | 20-523 |
Cow position: | chr25:24302692-24303188 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 20-540 |
Cow position: | chr25:31954395-31954896 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 15 |
Conread position: | 20-545 |
Cow position: | chr25:12081784-12082290 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 344 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 33, 15 |
Conread position: | 22-530 |
Cow position: | chr25:24636576-24637069 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 46 |
Conread position: | 25-334 |
Cow position: | chr25:38606767-38607063 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 225 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 25, 10 |
Conread position: | 31-530 |
Cow position: | chr25:9979264-9979756 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 33 |
Conread position: | 31-530 |
Cow position: | chr25:13941179-13941663 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 38 |
Conread position: | 32-229 |
Cow position: | chr25:3404652-3404455 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 144 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 18, 33 |
Conread position: | 33-303 |
Cow position: | chr25:10288126-10288408 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 207 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 6, 33 |
Conread position: | 33-518 |
Cow position: | chr25:19015422-19015884 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 316 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 19, 31 |
Conread position: | 34-465 |
Cow position: | chr25:34343350-34343772 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 282 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 18, 33 |
Conread position: | 34-514 |
Cow position: | chr25:18474755-18474285 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 320 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 16, 33 |
Conread position: | 39-479 |
Cow position: | chr25:40140954-40141385 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 278 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 291, 27 |
Conread position: | 39-519 |
Cow position: | chr25:17994742-17995208 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 319 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 11, 28 |
Conread position: | 41-519 |
Cow position: | chr25:17210581-17211052 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 26 |
Conread position: | 45-465 |
Cow position: | chr25:27609712-27609302 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 273 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 7, 24 |
Conread position: | 52-514 |
Cow position: | chr25:18023295-18022840 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 14 |
Conread position: | 57-430 |
Cow position: | chr25:25705819-25705460 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 251 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 228, 11 |
Conread position: | 59-523 |
Cow position: | chr25:10893165-10893605 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 305 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 87-433 |
Cow position: | chr25:28262859-28262542 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 231 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 97-548 |
Cow position: | chr25:24663794-24664227 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 30 |
Conread position: | 121-518 |
Cow position: | chr25:32663416-32663038 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 262 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 51, 22 |
Conread position: | 170-528 |
Cow position: | chr25:14995607-14995946 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 258 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 161, 14 |
Conread position: | 180-519 |
Cow position: | chr25:14012274-14011925 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 234 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 82, 151 |
Conread position: | 184-497 |
Cow position: | chr25:22713150-22712848 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 215 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 183, 7 |
Conread position: | 188-519 |
Cow position: | chr25:9395822-9395491 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 221 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 8, 70 |
Conread position: | 191-498 |
Cow position: | chr25:15005475-15005187 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 223 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 140, 70 |
Conread position: | 208-540 |
Cow position: | chr25:24670170-24670503 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 221 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 60, 51 |
Conread position: | 209-525 |
Cow position: | chr25:478203-477886 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 212 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 121, 48 |
Conread position: | 213-530 |
Cow position: | chr25:10180965-10180655 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 215 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 19, 23 |
Conread position: | 226-443 |
Cow position: | chr25:36868379-36868171 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 151 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 107, 9 |
Conread position: | 251-540 |
Cow position: | chr25:19107802-19107524 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 206 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 76, 20 |
Conread position: | 272-530 |
Cow position: | chr25:2511965-2511708 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 169 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 59, 108 |
Conread position: | 392-530 |
Cow position: | chr25:14618804-14618944 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.