Cow genome map
| Conread name: | unkn-MI-P-NA-afq-h-05-1-UM.s1 |
| Conread position: | 15-487 |
| Cow position: | chr26:20256454-20255993 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 15-522 |
| Cow position: | chr26:21012947-21012454 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 17-443 |
| Cow position: | chr26:2770310-2770732 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 18-325 |
| Cow position: | chr26:10683732-10684026 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 18-375 |
| Cow position: | chr26:2197294-2197649 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 18-375 |
| Cow position: | chr26:14364452-14364789 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 18-454 |
| Cow position: | chr26:6988437-6988005 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 18-455 |
| Cow position: | chr26:24239530-24239100 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 18-463 |
| Cow position: | chr26:21315011-21314570 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 18-466 |
| Cow position: | chr26:12550943-12551381 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 17 |
| Conread position: | 18-519 |
| Cow position: | chr26:6475844-6476339 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 18-519 |
| Cow position: | chr26:7558786-7559278 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 18-519 |
| Cow position: | chr26:8084658-8084164 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 18-519 |
| Cow position: | chr26:13806197-13806689 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 18-519 |
| Cow position: | chr26:19791581-19792060 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 18-519 |
| Cow position: | chr26:25393616-25393124 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 18-519 |
| Cow position: | chr26:28706231-28706720 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 19-317 |
| Cow position: | chr26:23315293-23315582 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 19-519 |
| Cow position: | chr26:11537656-11537163 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 20-375 |
| Cow position: | chr26:11303380-11303038 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 20-480 |
| Cow position: | chr26:7603420-7603872 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 20-530 |
| Cow position: | chr26:33949551-33950043 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 346 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 22-409 |
| Cow position: | chr26:26191925-26192302 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 22-461 |
| Cow position: | chr26:9825304-9825735 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 22-519 |
| Cow position: | chr26:22622035-22621545 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 328 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 25-548 |
| Cow position: | chr26:7307804-7307293 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 10 |
| Conread position: | 27-525 |
| Cow position: | chr26:4111457-4111949 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 30-455 |
| Cow position: | chr26:32829833-32829414 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 30-465 |
| Cow position: | chr26:9100171-9100603 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 31-524 |
| Cow position: | chr26:26281598-26281119 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 32-235 |
| Cow position: | chr26:35147861-35148061 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 34-518 |
| Cow position: | chr26:17993193-17993658 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 36-487 |
| Cow position: | chr26:1621462-1621016 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 38-527 |
| Cow position: | chr26:26238813-26238329 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 316 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 40-524 |
| Cow position: | chr26:7522277-7522752 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 44-452 |
| Cow position: | chr26:27986786-27987196 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 71-419 |
| Cow position: | chr26:16602495-16602821 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 127, 83 |
| Conread position: | 77-514 |
| Cow position: | chr26:9642349-9641931 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 246, 83 |
| Conread position: | 146-465 |
| Cow position: | chr26:13773751-13773442 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 157-495 |
| Cow position: | chr26:20185738-20185400 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 171, 11 |
| Conread position: | 157-512 |
| Cow position: | chr26:7479337-7479690 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 191-530 |
| Cow position: | chr26:10124499-10124818 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 67 |
| Conread position: | 203-495 |
| Cow position: | chr26:8222423-8222136 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 148, 54 |
| Conread position: | 230-497 |
| Cow position: | chr26:887744-887481 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 27 |
| Conread position: | 258-518 |
| Cow position: | chr26:25807019-25806765 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 97 |
| Conread position: | 278-546 |
| Cow position: | chr26:7900037-7900295 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 166, 66 |
Show alignments to all cow chromosomes.