Cow genome map
Conread name: | unkn-MI-P-NA-afq-h-05-1-UM.s1 |
Conread position: | 1-519 |
Cow position: | chr29:25456477-25456992 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 337 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 32, 148 |
Conread position: | 5-520 |
Cow position: | chr29:34332587-34333103 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 344 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 127, 30 |
Conread position: | 13-326 |
Cow position: | chr29:27619407-27619107 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 222 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 37, 52 |
Conread position: | 13-455 |
Cow position: | chr29:7666453-7666883 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 297 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 39, 54 |
Conread position: | 13-514 |
Cow position: | chr29:22949093-22949585 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 333 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 39, 24 |
Conread position: | 15-514 |
Cow position: | chr29:20642285-20641799 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 20 |
Conread position: | 17-461 |
Cow position: | chr29:4001990-4001556 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 297 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 35, 18 |
Conread position: | 18-148 |
Cow position: | chr29:13616083-13616212 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 32, 12 |
Conread position: | 18-148 |
Cow position: | chr29:41850231-41850361 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 98, 46 |
Conread position: | 18-321 |
Cow position: | chr29:2482752-2483049 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 18-443 |
Cow position: | chr29:10154838-10154418 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 46 |
Conread position: | 18-452 |
Cow position: | chr29:2744700-2745130 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-455 |
Cow position: | chr29:11365818-11365389 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 294 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 36, 17 |
Conread position: | 18-463 |
Cow position: | chr29:22935858-22935412 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 302 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-465 |
Cow position: | chr29:2103645-2103205 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-465 |
Cow position: | chr29:5241199-5240759 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-465 |
Cow position: | chr29:7811394-7811834 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 296 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-465 |
Cow position: | chr29:13077509-13077060 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 312 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 33, 17 |
Conread position: | 18-465 |
Cow position: | chr29:18364837-18365260 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 311 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 35, 17 |
Conread position: | 18-465 |
Cow position: | chr29:35434441-35434001 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-465 |
Cow position: | chr29:41183377-41183818 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 49 |
Conread position: | 18-471 |
Cow position: | chr29:26216722-26216298 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 304 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-480 |
Cow position: | chr29:26968532-26968086 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-498 |
Cow position: | chr29:32913314-32913788 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 17 |
Conread position: | 18-513 |
Cow position: | chr29:19565101-19565590 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 17 |
Conread position: | 18-518 |
Cow position: | chr29:32808171-32807673 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 329 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-519 |
Cow position: | chr29:727533-727039 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-519 |
Cow position: | chr29:1743303-1742814 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-519 |
Cow position: | chr29:19524337-19524829 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 18-523 |
Cow position: | chr29:16065513-16065016 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 17 |
Conread position: | 18-524 |
Cow position: | chr29:11798586-11798088 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 17 |
Conread position: | 18-528 |
Cow position: | chr29:4490290-4489804 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 19 |
Conread position: | 18-530 |
Cow position: | chr29:11786801-11786301 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 51 |
Conread position: | 18-553 |
Cow position: | chr29:37451882-37451348 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 18-556 |
Cow position: | chr29:93124-92612 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 359 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 38, 70 |
Conread position: | 19-231 |
Cow position: | chr29:20904736-20904945 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 158 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 12, 47 |
Conread position: | 20-465 |
Cow position: | chr29:10652903-10652471 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 15 |
Conread position: | 22-529 |
Cow position: | chr29:30106060-30106544 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 13 |
Conread position: | 22-545 |
Cow position: | chr29:26263421-26262907 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 8 |
Conread position: | 25-236 |
Cow position: | chr29:19547324-19547529 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 30, 10 |
Conread position: | 25-465 |
Cow position: | chr29:4875341-4875772 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 10 |
Conread position: | 25-523 |
Cow position: | chr29:38247187-38247678 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 40 |
Conread position: | 27-453 |
Cow position: | chr29:24266050-24265630 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 269 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 211, 41 |
Conread position: | 29-304 |
Cow position: | chr29:3047014-3047277 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 200 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 21, 36 |
Conread position: | 30-329 |
Cow position: | chr29:4260926-4260636 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 212 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 20, 35 |
Conread position: | 30-523 |
Cow position: | chr29:29701417-29701903 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 330 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 300, 38 |
Conread position: | 30-533 |
Cow position: | chr29:41163113-41163596 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 325 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 23, 37 |
Conread position: | 31-465 |
Cow position: | chr29:2367249-2367675 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 293 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 19, 28 |
Conread position: | 31-533 |
Cow position: | chr29:34120726-34121211 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 411, 124 |
Conread position: | 32-519 |
Cow position: | chr29:40934392-40933923 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 37 |
Conread position: | 34-524 |
Cow position: | chr29:30517278-30517769 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 326 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 27, 22 |
Conread position: | 34-530 |
Cow position: | chr29:19617023-19617508 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 319 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 17, 31 |
Conread position: | 38-465 |
Cow position: | chr29:16347996-16347575 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 31 |
Conread position: | 44-443 |
Cow position: | chr29:34794080-34794473 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 265 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 128, 22 |
Conread position: | 59-520 |
Cow position: | chr29:31041740-31042196 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 299 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 214, 111 |
Conread position: | 68-537 |
Cow position: | chr29:36323783-36323320 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 109 |
Conread position: | 73-331 |
Cow position: | chr29:29599490-29599741 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 85-431 |
Cow position: | chr29:28621736-28622068 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 219 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 156, 8 |
Conread position: | 104-465 |
Cow position: | chr29:290122-290472 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 241 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 160, 49 |
Conread position: | 150-542 |
Cow position: | chr29:42940652-42940266 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 250 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 19, 52 |
Conread position: | 160-443 |
Cow position: | chr29:23907692-23907402 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 193 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 10, 189 |
Conread position: | 169-463 |
Cow position: | chr29:13128999-13129278 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 203 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 169, 18 |
Conread position: | 184-452 |
Cow position: | chr29:31786114-31785856 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 181 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 146, 74 |
Conread position: | 187-495 |
Cow position: | chr29:8512112-8511814 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 205 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 7, 49 |
Conread position: | 202-513 |
Cow position: | chr29:43626004-43626303 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 205 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 139, 55 |
Conread position: | 210-481 |
Cow position: | chr29:34390517-34390776 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 192 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 131, 47 |
Conread position: | 218-498 |
Cow position: | chr29:27687209-27686940 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 192 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 258-524 |
Cow position: | chr29:22269148-22268883 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 187 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 137, 69 |
Conread position: | 273-523 |
Cow position: | chr29:35261422-35261180 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 182 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 55, 108 |
Conread position: | 290-529 |
Cow position: | chr29:9971840-9972084 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 158 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.