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Cow genome map

           
Conread name:
           
unkn-MI-P-NA-afr-b-06-1-UM.s1
        

               
Conread position:
               
222-485
               

               
Cow position:
               
chr21:38121367-38121095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
234-447
               

               
Cow position:
               
chr21:46451701-46451916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
236-446
               

               
Cow position:
               
chr21:11678048-11678266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
238-402
               

               
Cow position:
               
chr21:9710477-9710645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
238-411
               

               
Cow position:
               
chr21:43642794-43642614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 161
               

               
Conread position:
               
238-423
               

               
Cow position:
               
chr21:20174587-20174378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
238-470
               

               
Cow position:
               
chr21:19868687-19868946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 217
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chr21:24598912-24598648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
238-501
               

               
Cow position:
               
chr21:34740095-34739822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
241-496
               

               
Cow position:
               
chr21:22861256-22860984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
249-491
               

               
Cow position:
               
chr21:28211436-28211187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
250-491
               

               
Cow position:
               
chr21:7673371-7673110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
258-369
               

               
Cow position:
               
chr21:11298801-11298684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
258-387
               

               
Cow position:
               
chr21:25536351-25536224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
258-425
               

               
Cow position:
               
chr21:30658111-30657928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
258-442
               

               
Cow position:
               
chr21:22851165-22850963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 159
               

               
Conread position:
               
258-482
               

               
Cow position:
               
chr21:15911628-15911399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
258-482
               

               
Cow position:
               
chr21:32559121-32559362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 195
               

               
Conread position:
               
258-482
               

               
Cow position:
               
chr21:44214361-44214123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
258-484
               

               
Cow position:
               
chr21:25764866-25764631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
258-491
               

               
Cow position:
               
chr21:802073-802317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 204
               

               
Conread position:
               
258-491
               

               
Cow position:
               
chr21:27229553-27229804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 92
               

               
Conread position:
               
258-502
               

               
Cow position:
               
chr21:297979-297731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
258-511
               

               
Cow position:
               
chr21:12301280-12301546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
258-548
               

               
Cow position:
               
chr21:674918-674615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
258-551
               

               
Cow position:
               
chr21:20262097-20262404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
259-476
               

               
Cow position:
               
chr21:12104602-12104369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
259-491
               

               
Cow position:
               
chr21:20418457-20418694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
259-491
               

               
Cow position:
               
chr21:42209396-42209641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
261-391
               

               
Cow position:
               
chr21:12074931-12075065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
264-492
               

               
Cow position:
               
chr21:5392315-5392549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
275-491
               

               
Cow position:
               
chr21:13036691-13036910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
275-491
               

               
Cow position:
               
chr21:35900052-35899834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
277-500
               

               
Cow position:
               
chr21:6388206-6387981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
292-416
               

               
Cow position:
               
chr21:17790767-17790891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
294-484
               

               
Cow position:
               
chr21:28191223-28191028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
296-481
               

               
Cow position:
               
chr21:16570089-16569901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
297-476
               

               
Cow position:
               
chr21:7268694-7268878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
92, 126
               

               
Conread position:
               
297-494
               

               
Cow position:
               
chr21:28924298-28924097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
298-491
               

               
Cow position:
               
chr21:41974189-41974385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
299-482
               

               
Cow position:
               
chr21:41046992-41046803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
301-460
               

               
Cow position:
               
chr21:12723335-12723178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
309-482
               

               
Cow position:
               
chr21:31691659-31691481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
309-484
               

               
Cow position:
               
chr21:724702-724889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
309-491
               

               
Cow position:
               
chr21:27624875-27624699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 135
               

               
Conread position:
               
310-393
               

               
Cow position:
               
chr21:6603116-6603033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-411
               

               
Cow position:
               
chr21:41598342-41598240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
310-414
               

               
Cow position:
               
chr21:30622814-30622708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
310-420
               

               
Cow position:
               
chr21:27810563-27810453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-423
               

               
Cow position:
               
chr21:8509258-8509373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
310-428
               

               
Cow position:
               
chr21:41450557-41450437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
310-429
               

               
Cow position:
               
chr21:15012615-15012493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-430
               

               
Cow position:
               
chr21:25012257-25012135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
310-431
               

               
Cow position:
               
chr21:40820678-40820801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
310-432
               

               
Cow position:
               
chr21:14228104-14228229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
310-436
               

               
Cow position:
               
chr21:25014857-25014979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
310-438
               

               
Cow position:
               
chr21:5341918-5342049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-441
               

               
Cow position:
               
chr21:24875529-24875394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
310-443
               

               
Cow position:
               
chr21:20163884-20163748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
310-443
               

               
Cow position:
               
chr21:39393925-39393788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
310-445
               

               
Cow position:
               
chr21:42348520-42348653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
310-446
               

               
Cow position:
               
chr21:33210364-33210225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
310-447
               

               
Cow position:
               
chr21:8625349-8625214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
310-447
               

               
Cow position:
               
chr21:16498692-16498555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-447
               

               
Cow position:
               
chr21:32297343-32297483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
310-454
               

               
Cow position:
               
chr21:9417982-9418127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
310-459
               

               
Cow position:
               
chr21:21615958-21615805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
310-468
               

               
Cow position:
               
chr21:868748-868913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
310-468
               

               
Cow position:
               
chr21:47464943-47465108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
310-470
               

               
Cow position:
               
chr21:36682501-36682332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr21:19360000-19360167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-476
               

               
Cow position:
               
chr21:7581729-7581897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 131
               

               
Conread position:
               
310-476
               

               
Cow position:
               
chr21:22465366-22465202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
310-480
               

               
Cow position:
               
chr21:28442908-28442743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 133
               

               
Conread position:
               
310-482
               

               
Cow position:
               
chr21:8349504-8349327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
310-482
               

               
Cow position:
               
chr21:9990686-9990509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 123
               

               
Conread position:
               
310-482
               

               
Cow position:
               
chr21:26245090-26244917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
310-482
               

               
Cow position:
               
chr21:30980402-30980579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-482
               

               
Cow position:
               
chr21:45262634-45262814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-483
               

               
Cow position:
               
chr21:7394113-7394287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
310-483
               

               
Cow position:
               
chr21:12461790-12461972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
310-484
               

               
Cow position:
               
chr21:20160852-20160675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
310-484
               

               
Cow position:
               
chr21:47763942-47764118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
310-485
               

               
Cow position:
               
chr21:643500-643320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 125
               

               
Conread position:
               
310-486
               

               
Cow position:
               
chr21:31159573-31159398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
147, 65
               

               
Conread position:
               
310-489
               

               
Cow position:
               
chr21:48233989-48234170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 154
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:82243-82069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 127
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:641763-641576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:6713347-6713536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:9256488-9256667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:11739944-11740131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:14126453-14126277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:29001981-29002168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:29485154-29484969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
135, 71
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:30222521-30222333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:30250029-30250206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:30835539-30835353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:36795779-36795590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-491
               

               
Cow position:
               
chr21:42135440-42135630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-492
               

               
Cow position:
               
chr21:829034-829223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
310-492
               

               
Cow position:
               
chr21:13365518-13365329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
310-492
               

               
Cow position:
               
chr21:24858491-24858302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
310-492
               

               
Cow position:
               
chr21:44658743-44658569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
310-492
               

               
Cow position:
               
chr21:47719127-47719318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
310-494
               

               
Cow position:
               
chr21:36508410-36508229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
310-494
               

               
Cow position:
               
chr21:44565546-44565733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
310-494
               

               
Cow position:
               
chr21:44825710-44825904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
310-496
               

               
Cow position:
               
chr21:15611316-15611127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
310-496
               

               
Cow position:
               
chr21:28030464-28030273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
310-496
               

               
Cow position:
               
chr21:32339564-32339752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 133
               

               
Conread position:
               
310-497
               

               
Cow position:
               
chr21:71762-71568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
310-497
               

               
Cow position:
               
chr21:18800358-18800551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 147
               

               
Conread position:
               
310-497
               

               
Cow position:
               
chr21:30990111-30990292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
310-497
               

               
Cow position:
               
chr21:33264021-33263827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 185
               

               
Conread position:
               
310-497
               

               
Cow position:
               
chr21:33982634-33982822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
310-497
               

               
Cow position:
               
chr21:38692372-38692187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
310-497
               

               
Cow position:
               
chr21:41590389-41590582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
74, 164
               

               
Conread position:
               
310-499
               

               
Cow position:
               
chr21:11057705-11057890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
310-502
               

               
Cow position:
               
chr21:8426621-8426425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
310-502
               

               
Cow position:
               
chr21:33350917-33350719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 125
               

               
Conread position:
               
310-502
               

               
Cow position:
               
chr21:37299638-37299437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
310-505
               

               
Cow position:
               
chr21:27568997-27569195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
310-506
               

               
Cow position:
               
chr21:28600058-28599865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
310-510
               

               
Cow position:
               
chr21:45835213-45835431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
310-533
               

               
Cow position:
               
chr21:29069150-29069383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
310-545
               

               
Cow position:
               
chr21:29014383-29014633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
310-578
               

               
Cow position:
               
chr21:7169864-7169590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
76, 183
               

               
Conread position:
               
310-585
               

               
Cow position:
               
chr21:28626413-28626134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
135, 76
               

               
Conread position:
               
311-482
               

               
Cow position:
               
chr21:31090260-31090426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
311-484
               

               
Cow position:
               
chr21:10561409-10561587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
311-484
               

               
Cow position:
               
chr21:46132749-46132572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
311-491
               

               
Cow position:
               
chr21:742452-742275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
311-549
               

               
Cow position:
               
chr21:42413922-42414167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 190
               

               
Conread position:
               
312-443
               

               
Cow position:
               
chr21:18828129-18828262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
312-476
               

               
Cow position:
               
chr21:30592135-30592302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
312-479
               

               
Cow position:
               
chr21:41522241-41522405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
312-481
               

               
Cow position:
               
chr21:40192131-40192301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
312-484
               

               
Cow position:
               
chr21:36297667-36297487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
312-491
               

               
Cow position:
               
chr21:46264344-46264161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
312-492
               

               
Cow position:
               
chr21:34654247-34654063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
312-497
               

               
Cow position:
               
chr21:45850533-45850728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
314-490
               

               
Cow position:
               
chr21:48083057-48083228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
315-459
               

               
Cow position:
               
chr21:17252808-17252953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 136
               

               
Conread position:
               
315-460
               

               
Cow position:
               
chr21:28907375-28907522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
315-484
               

               
Cow position:
               
chr21:22014361-22014184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 165
               

               
Conread position:
               
315-485
               

               
Cow position:
               
chr21:9027486-9027308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
315-491
               

               
Cow position:
               
chr21:11644795-11644980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
315-534
               

               
Cow position:
               
chr21:45906452-45906674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
316-485
               

               
Cow position:
               
chr21:35354703-35354529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
317-442
               

               
Cow position:
               
chr21:31147766-31147893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
66, 107
               

               
Conread position:
               
317-491
               

               
Cow position:
               
chr21:47363565-47363748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
318-482
               

               
Cow position:
               
chr21:47160386-47160216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 160
               

               
Conread position:
               
318-490
               

               
Cow position:
               
chr21:2679716-2679547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
318-491
               

               
Cow position:
               
chr21:12801579-12801762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
318-491
               

               
Cow position:
               
chr21:38449281-38449457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 60
               

               
Conread position:
               
319-487
               

               
Cow position:
               
chr21:19240706-19240883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
320-434
               

               
Cow position:
               
chr21:30243515-30243632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
320-482
               

               
Cow position:
               
chr21:29213994-29214160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 152
               

               
Conread position:
               
321-484
               

               
Cow position:
               
chr21:19258983-19258821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
321-588
               

               
Cow position:
               
chr21:18850059-18850338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 208
               

               
Conread position:
               
322-443
               

               
Cow position:
               
chr21:7088764-7088640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
325-482
               

               
Cow position:
               
chr21:20183232-20183070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
326-482
               

               
Cow position:
               
chr21:18842077-18842240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
330-544
               

               
Cow position:
               
chr21:19363304-19363526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
331-484
               

               
Cow position:
               
chr21:20260164-20260324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
335-482
               

               
Cow position:
               
chr21:16187656-16187810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
336-491
               

               
Cow position:
               
chr21:20193044-20192887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
336-491
               

               
Cow position:
               
chr21:42540072-42540232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 148
               

               
Conread position:
               
341-483
               

               
Cow position:
               
chr21:46599506-46599357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
346-480
               

               
Cow position:
               
chr21:44515404-44515264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
489-643
               

               
Cow position:
               
chr21:37292979-37292830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.