Cow genome map


           Conread name:
           unkn-MI-P-NA-afr-b-06-1-UM.s1
        

               Conread position:
               194-472
               

               Cow position:
               chr23:35938586-35938292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 86
               

               Conread position:
               229-484
               

               Cow position:
               chr23:16961508-16961231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               231-497
               

               Cow position:
               chr23:19872480-19872752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               234-491
               

               Cow position:
               chr23:18901852-18902119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               16, 227
               

               Conread position:
               234-494
               

               Cow position:
               chr23:15286935-15287210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 269
               

               Conread position:
               235-447
               

               Cow position:
               chr23:23904132-23904353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               236-482
               

               Cow position:
               chr23:1863671-1863409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               236-490
               

               Cow position:
               chr23:20539590-20539312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               237-484
               

               Cow position:
               chr23:21765105-21764853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               238-410
               

               Cow position:
               chr23:1680500-1680322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               238-482
               

               Cow position:
               chr23:5237230-5237493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 35
               

               Conread position:
               239-491
               

               Cow position:
               chr23:1403615-1403876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               258-386
               

               Cow position:
               chr23:672771-672638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               258-412
               

               Cow position:
               chr23:5461172-5461330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               258-434
               

               Cow position:
               chr23:22668323-22668517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               258-434
               

               Cow position:
               chr23:40081688-40081501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               258-443
               

               Cow position:
               chr23:7709971-7709769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               58, 142
               

               Conread position:
               258-447
               

               Cow position:
               chr23:20615159-20615352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               258-482
               

               Cow position:
               chr23:13202182-13202424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 34
               

               Conread position:
               258-483
               

               Cow position:
               chr23:24984002-24984231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               55, 202
               

               Conread position:
               258-484
               

               Cow position:
               chr23:24509873-24509637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 205
               

               Conread position:
               258-489
               

               Cow position:
               chr23:1438467-1438223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               258-491
               

               Cow position:
               chr23:5732726-5732478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               258-491
               

               Cow position:
               chr23:16880981-16881234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               258-491
               

               Cow position:
               chr23:18748887-18749137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               258-497
               

               Cow position:
               chr23:18322259-18322493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 128
               

               Conread position:
               259-446
               

               Cow position:
               chr23:8063716-8063520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               259-497
               

               Cow position:
               chr23:26051208-26050958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               260-491
               

               Cow position:
               chr23:7361282-7361045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               261-419
               

               Cow position:
               chr23:24514048-24513884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 152
               

               Conread position:
               261-493
               

               Cow position:
               chr23:6147867-6148116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               52, 234
               

               Conread position:
               292-419
               

               Cow position:
               chr23:5447996-5448123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               96, 5
               

               Conread position:
               292-482
               

               Cow position:
               chr23:10497829-10497646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               295-491
               

               Cow position:
               chr23:16699913-16700110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               297-484
               

               Cow position:
               chr23:1981536-1981719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               152
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               300-492
               

               Cow position:
               chr23:2799705-2799507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               303-534
               

               Cow position:
               chr23:24685366-24685132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               304-513
               

               Cow position:
               chr23:24926934-24926718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               307-423
               

               Cow position:
               chr23:25968538-25968423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               309-453
               

               Cow position:
               chr23:32412033-32411879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               309-544
               

               Cow position:
               chr23:12363502-12363743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               74, 209
               

               Conread position:
               310-425
               

               Cow position:
               chr23:36022674-36022788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               310-435
               

               Cow position:
               chr23:1653116-1652988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               310-436
               

               Cow position:
               chr23:37118599-37118724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               310-437
               

               Cow position:
               chr23:17597541-17597411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-439
               

               Cow position:
               chr23:1194377-1194509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-443
               

               Cow position:
               chr23:1672480-1672348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               310-443
               

               Cow position:
               chr23:3814166-3814302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               310-443
               

               Cow position:
               chr23:5785959-5785823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-443
               

               Cow position:
               chr23:22238707-22238843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               310-443
               

               Cow position:
               chr23:23197458-23197325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-447
               

               Cow position:
               chr23:8698535-8698395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               310-447
               

               Cow position:
               chr23:9268694-9268558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               310-447
               

               Cow position:
               chr23:13624690-13624823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               310-452
               

               Cow position:
               chr23:33160586-33160728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-453
               

               Cow position:
               chr23:22414193-22414331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               310-456
               

               Cow position:
               chr23:25990323-25990471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               310-460
               

               Cow position:
               chr23:18823104-18822950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               310-460
               

               Cow position:
               chr23:29480000-29479852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               310-468
               

               Cow position:
               chr23:20002369-20002206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               310-469
               

               Cow position:
               chr23:2160525-2160685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               135, 81
               

               Conread position:
               310-473
               

               Cow position:
               chr23:3244354-3244520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-477
               

               Cow position:
               chr23:40095299-40095131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               76, 117
               

               Conread position:
               310-479
               

               Cow position:
               chr23:35368932-35369105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               310-479
               

               Cow position:
               chr23:39330177-39330349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               310-480
               

               Cow position:
               chr23:11212622-11212445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               310-480
               

               Cow position:
               chr23:26986157-26986333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               148
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               310-481
               

               Cow position:
               chr23:19565564-19565387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 61
               

               Conread position:
               310-482
               

               Cow position:
               chr23:1525761-1525588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               135, 83
               

               Conread position:
               310-482
               

               Cow position:
               chr23:1589704-1589523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               310-482
               

               Cow position:
               chr23:1876826-1876648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               310-482
               

               Cow position:
               chr23:5540262-5540097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               310-482
               

               Cow position:
               chr23:6244482-6244652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 121
               

               Conread position:
               310-482
               

               Cow position:
               chr23:8917564-8917737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               126, 41
               

               Conread position:
               310-482
               

               Cow position:
               chr23:16076051-16076224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               310-482
               

               Cow position:
               chr23:35965261-35965080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-483
               

               Cow position:
               chr23:33622035-33622216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               310-484
               

               Cow position:
               chr23:348833-349015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-484
               

               Cow position:
               chr23:1720868-1721048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 105
               

               Conread position:
               310-484
               

               Cow position:
               chr23:11045601-11045421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               310-484
               

               Cow position:
               chr23:14524101-14523919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               310-484
               

               Cow position:
               chr23:22105675-22105496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               310-484
               

               Cow position:
               chr23:22297924-22298100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               134, 81
               

               Conread position:
               310-484
               

               Cow position:
               chr23:39276011-39275825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 6
               

               Conread position:
               310-484
               

               Cow position:
               chr23:40275433-40275609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               138, 85
               

               Conread position:
               310-484
               

               Cow position:
               chr23:40637371-40637191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               76, 8
               

               Conread position:
               310-485
               

               Cow position:
               chr23:1614543-1614724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               310-485
               

               Cow position:
               chr23:2358995-2358826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               310-485
               

               Cow position:
               chr23:3967445-3967624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               310-490
               

               Cow position:
               chr23:29458984-29459161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               73, 138
               

               Conread position:
               310-491
               

               Cow position:
               chr23:534342-534156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               73, 128
               

               Conread position:
               310-491
               

               Cow position:
               chr23:1222122-1222311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:2282068-2282246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:2501739-2501925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 180
               

               Conread position:
               310-491
               

               Cow position:
               chr23:3223336-3223508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:3293809-3293620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               76, 20
               

               Conread position:
               310-491
               

               Cow position:
               chr23:3394381-3394567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               310-491
               

               Cow position:
               chr23:5795592-5795406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               78, 89
               

               Conread position:
               310-491
               

               Cow position:
               chr23:13599455-13599273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:17404953-17404767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               310-491
               

               Cow position:
               chr23:17486709-17486898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:18286307-18286120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:18402175-18402360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:21439887-21440073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:21452615-21452803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:21502516-21502711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:29034429-29034245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               134, 76
               

               Conread position:
               310-491
               

               Cow position:
               chr23:30951070-30950885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:33629045-33628854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               310-491
               

               Cow position:
               chr23:35247482-35247294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-492
               

               Cow position:
               chr23:1290412-1290221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               310-492
               

               Cow position:
               chr23:40391591-40391402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               310-494
               

               Cow position:
               chr23:3408790-3408991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               310-494
               

               Cow position:
               chr23:20744481-20744668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               310-494
               

               Cow position:
               chr23:29626537-29626340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               310-497
               

               Cow position:
               chr23:3282007-3282199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               74, 183
               

               Conread position:
               310-497
               

               Cow position:
               chr23:3433798-3433988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 159
               

               Conread position:
               310-497
               

               Cow position:
               chr23:24966348-24966542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               310-498
               

               Cow position:
               chr23:9734523-9734336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               76, 140
               

               Conread position:
               310-501
               

               Cow position:
               chr23:5707108-5706909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               310-504
               

               Cow position:
               chr23:34611376-34611559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               310-524
               

               Cow position:
               chr23:3431182-3430962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               76, 11
               

               Conread position:
               310-544
               

               Cow position:
               chr23:38455063-38455307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 237
               

               Conread position:
               310-561
               

               Cow position:
               chr23:24867424-24867162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               73, 211
               

               Conread position:
               310-566
               

               Cow position:
               chr23:26825181-26824931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               204, 76
               

               Conread position:
               311-426
               

               Cow position:
               chr23:27849110-27848992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               311-443
               

               Cow position:
               chr23:17231261-17231128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               311-447
               

               Cow position:
               chr23:18605293-18605432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               311-467
               

               Cow position:
               chr23:11314920-11315084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               311-481
               

               Cow position:
               chr23:16744660-16744498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               72, 111
               

               Conread position:
               311-481
               

               Cow position:
               chr23:33717429-33717602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 14
               

               Conread position:
               311-484
               

               Cow position:
               chr23:1883510-1883328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               311-484
               

               Cow position:
               chr23:4646624-4646446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               311-491
               

               Cow position:
               chr23:5881404-5881590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               311-497
               

               Cow position:
               chr23:9599607-9599412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               311-511
               

               Cow position:
               chr23:40995284-40995082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               125, 179
               

               Conread position:
               312-440
               

               Cow position:
               chr23:1877783-1877914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               312-445
               

               Cow position:
               chr23:13511838-13511697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               312-484
               

               Cow position:
               chr23:2487879-2488050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 140
               

               Conread position:
               312-484
               

               Cow position:
               chr23:39778514-39778334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               312-491
               

               Cow position:
               chr23:1697785-1697605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               145, 161
               

               Conread position:
               312-494
               

               Cow position:
               chr23:39049326-39049510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 113
               

               Conread position:
               313-485
               

               Cow position:
               chr23:3830089-3830266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               315-447
               

               Cow position:
               chr23:4908610-4908475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 26
               

               Conread position:
               315-481
               

               Cow position:
               chr23:1533012-1532844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               68, 115
               

               Conread position:
               315-482
               

               Cow position:
               chr23:11473395-11473571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               315-484
               

               Cow position:
               chr23:22586987-22586824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               315-484
               

               Cow position:
               chr23:31493974-31493799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               315-491
               

               Cow position:
               chr23:385202-385384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               315-491
               

               Cow position:
               chr23:5400771-5400592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               315-491
               

               Cow position:
               chr23:7845403-7845221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               316-447
               

               Cow position:
               chr23:5449812-5449679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               316-491
               

               Cow position:
               chr23:1700999-1700836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               317-446
               

               Cow position:
               chr23:1760738-1760871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               319-447
               

               Cow position:
               chr23:5608973-5609105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               320-491
               

               Cow position:
               chr23:19769689-19769516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               321-476
               

               Cow position:
               chr23:6367707-6367552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               321-484
               

               Cow position:
               chr23:5426537-5426366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               322-484
               

               Cow position:
               chr23:4470397-4470566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               330-534
               

               Cow position:
               chr23:39806964-39806753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               114, 190
               

               Conread position:
               331-485
               

               Cow position:
               chr23:1733254-1733097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 48
               

               Conread position:
               335-482
               

               Cow position:
               chr23:308714-308865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               347-481
               

               Cow position:
               chr23:16563916-16563779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 117
               

               Conread position:
               518-643
               

               Cow position:
               chr23:26836871-26836744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.