Cow genome map
| Conread name: | unkn-MI-P-NA-afr-g-11-1-UM.s1 |
| Conread position: | 4-256 |
| Cow position: | chr6:7834529-7834268 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 5-379 |
| Cow position: | chr6:40866314-40866705 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 68, 26 |
| Conread position: | 5-380 |
| Cow position: | chr6:39438775-39438378 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 123, 26 |
| Conread position: | 5-444 |
| Cow position: | chr6:7178281-7178724 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 27, 126 |
| Conread position: | 5-444 |
| Cow position: | chr6:13105070-13104602 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 318 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 5-444 |
| Cow position: | chr6:44000071-43999606 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 318 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 5-446 |
| Cow position: | chr6:8203195-8202725 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 6-444 |
| Cow position: | chr6:8760283-8760754 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 8-444 |
| Cow position: | chr6:35875708-35876168 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 257 |
| Conread position: | 9-127 |
| Cow position: | chr6:31636407-31636525 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 10-295 |
| Cow position: | chr6:31565152-31565451 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 11-444 |
| Cow position: | chr6:27170580-27170125 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 21-450 |
| Cow position: | chr6:28104866-28105315 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 113-442 |
| Cow position: | chr6:13847913-13847573 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 50, 193 |
| Conread position: | 113-442 |
| Cow position: | chr6:43618602-43618262 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-442 |
| Cow position: | chr6:44032678-44032339 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 201, 122 |
| Conread position: | 113-444 |
| Cow position: | chr6:185582-185924 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-444 |
| Cow position: | chr6:330580-330921 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-444 |
| Cow position: | chr6:7140576-7140917 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 201, 87 |
| Conread position: | 113-444 |
| Cow position: | chr6:12665433-12665774 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 113-444 |
| Cow position: | chr6:13944793-13944452 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 113-444 |
| Cow position: | chr6:16052766-16052425 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 113-444 |
| Cow position: | chr6:26669979-26670323 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 113-444 |
| Cow position: | chr6:28490682-28491020 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 113-444 |
| Cow position: | chr6:40252547-40252206 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 201, 248 |
| Conread position: | 113-444 |
| Cow position: | chr6:40275974-40275633 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 113-444 |
| Cow position: | chr6:66232701-66232361 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 122-428 |
| Cow position: | chr6:28133807-28133502 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 204, 82 |
| Conread position: | 122-444 |
| Cow position: | chr6:2375576-2375246 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 192, 242 |
| Conread position: | 127-444 |
| Cow position: | chr6:184911-185238 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 128-444 |
| Cow position: | chr6:27529133-27529456 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 186, 278 |
| Conread position: | 145-444 |
| Cow position: | chr6:44149702-44150011 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 167-444 |
| Cow position: | chr6:40325851-40326137 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 108, 9 |
| Conread position: | 205-445 |
| Cow position: | chr6:16635033-16634789 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 107, 141 |
| Conread position: | 219-444 |
| Cow position: | chr6:65842365-65842130 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 137 |
| Conread position: | 220-444 |
| Cow position: | chr6:39909304-39909072 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 232-444 |
| Cow position: | chr6:33500-33277 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 239-444 |
| Cow position: | chr6:3048505-3048721 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 239-444 |
| Cow position: | chr6:10498963-10499179 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 239-444 |
| Cow position: | chr6:24322620-24322836 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 239-444 |
| Cow position: | chr6:69221449-69221665 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 280-449 |
| Cow position: | chr6:31565474-31565651 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 5 |
Show alignments to all cow chromosomes.