Cow genome map


           Conread name:
           unkn-MI-P-O2-adv-d-07-1-UM.s1
        

               Conread position:
               1-523
               

               Cow position:
               chr13:24714994-24715493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               338
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 81
               

               Conread position:
               5-505
               

               Cow position:
               chr13:10925174-10924665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               349
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               6-533
               

               Cow position:
               chr13:43139448-43138959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               345
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               16-362
               

               Cow position:
               chr13:17569333-17568983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               113, 26
               

               Conread position:
               23-365
               

               Cow position:
               chr13:18058477-18058127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               119, 59
               

               Conread position:
               37-519
               

               Cow position:
               chr13:42200404-42200872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               39-507
               

               Cow position:
               chr13:55674424-55673962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 104
               

               Conread position:
               51-532
               

               Cow position:
               chr13:972099-971629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               63-533
               

               Cow position:
               chr13:34035183-34035638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               311
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               173, 27
               
Show alignments to all cow chromosomes.