Cow genome map


           Conread name:
           unkn-MI-P-O2-adv-d-07-1-UM.s1
        

               Conread position:
               11-531
               

               Cow position:
               chr22:21568216-21567717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               336
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               146, 64
               

               Conread position:
               12-521
               

               Cow position:
               chr22:34441408-34441910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 64
               

               Conread position:
               35-365
               

               Cow position:
               chr22:16094705-16095038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               36-531
               

               Cow position:
               chr22:17152887-17152393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 13
               

               Conread position:
               37-361
               

               Cow position:
               chr22:17949776-17950098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               104-531
               

               Cow position:
               chr22:15039055-15039471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               164-520
               

               Cow position:
               chr22:29013949-29013605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               168-515
               

               Cow position:
               chr22:25742884-25743222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 135
               

               Conread position:
               168-533
               

               Cow position:
               chr22:864451-864808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               170-515
               

               Cow position:
               chr22:6494224-6493905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 41
               
Show alignments to all cow chromosomes.