Cow genome map


           Conread name:
           unkn-MI-P-O2-adv-d-07-1-UM.s1
        

               Conread position:
               2-516
               

               Cow position:
               chr9:19067561-19068093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               350
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               104, 80
               

               Conread position:
               2-528
               

               Cow position:
               chr9:38792808-38793328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 39
               

               Conread position:
               11-365
               

               Cow position:
               chr9:41728060-41728419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               19-360
               

               Cow position:
               chr9:4341349-4341012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               36-493
               

               Cow position:
               chr9:51620270-51620708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               308
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               39-527
               

               Cow position:
               chr9:45285710-45285223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               167-501
               

               Cow position:
               chr9:47472646-47472977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               69, 121
               

               Conread position:
               170-533
               

               Cow position:
               chr9:48564042-48564409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               171-533
               

               Cow position:
               chr9:23431182-23430833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               50, 39
               
Show alignments to all cow chromosomes.