Cow genome map

Conread name: unkn-RMX602767752.R1

Conread position: 188-403
Cow position: chr1:72356606-72356391 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 102

Conread position: 195-439
Cow position: chr1:77232344-77232578 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 201-436
Cow position: chr1:852395-852173 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 163, 23

Conread position: 203-439
Cow position: chr1:99221117-99221351 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 102

Conread position: 205-439
Cow position: chr1:77683597-77683352 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 136

Conread position: 207-439
Cow position: chr1:78067831-78068069 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 79

Conread position: 208-369
Cow position: chr1:23282793-23282628 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 83

Conread position: 208-418
Cow position: chr1:86383578-86383786 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 0

Conread position: 208-419
Cow position: chr1:1380216-1380016 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 208-426
Cow position: chr1:3417594-3417367 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 208-432
Cow position: chr1:23055275-23055054 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 16

Conread position: 208-437
Cow position: chr1:22824124-22823907 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 156, 16

Conread position: 208-439
Cow position: chr1:4294559-4294344 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 156, 8

Conread position: 208-439
Cow position: chr1:17317127-17317356 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 95

Conread position: 208-439
Cow position: chr1:72422191-72422408 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 156, 22

Conread position: 209-416
Cow position: chr1:68844938-68845147 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 100

Conread position: 209-418
Cow position: chr1:47883381-47883596 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 15

Conread position: 209-438
Cow position: chr1:69265042-69264811 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 34, 99

Conread position: 210-384
Cow position: chr1:34692573-34692399 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 210-384
Cow position: chr1:51469764-51469596 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 210-412
Cow position: chr1:53671517-53671724 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 12

Conread position: 210-419
Cow position: chr1:39683927-39684125 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 42

Conread position: 210-419
Cow position: chr1:43148324-43148526 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 210-420
Cow position: chr1:40530872-40531085 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 14

Conread position: 210-428
Cow position: chr1:76657834-76658055 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 78

Conread position: 210-437
Cow position: chr1:186068-186272 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 210-439
Cow position: chr1:1496311-1496532 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 43

Conread position: 210-439
Cow position: chr1:65103842-65103621 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 14

Conread position: 210-439
Cow position: chr1:92684467-92684695 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 76

Conread position: 210-439
Cow position: chr1:98551947-98551720 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 105

Conread position: 211-439
Cow position: chr1:24777771-24777989 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 107, 40

Conread position: 211-439
Cow position: chr1:85712673-85712440 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 13

Conread position: 212-437
Cow position: chr1:68126977-68127188 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 7, 46

Conread position: 213-388
Cow position: chr1:97321834-97322003 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 213-439
Cow position: chr1:83748179-83747943 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 192

Conread position: 214-419
Cow position: chr1:44269318-44269110 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 123

Conread position: 214-423
Cow position: chr1:23180316-23180109 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 60

Conread position: 214-437
Cow position: chr1:8624217-8624447 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 138

Conread position: 214-437
Cow position: chr1:80336007-80336247 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 157

Conread position: 217-396
Cow position: chr1:816190-816370 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 61

Conread position: 217-408
Cow position: chr1:88231559-88231735 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 217-409
Cow position: chr1:76081044-76080836 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 178

Conread position: 217-415
Cow position: chr1:55194023-55194223 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 90

Conread position: 217-419
Cow position: chr1:1875618-1875407 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 50

Conread position: 217-419
Cow position: chr1:53540793-53540594 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 217-424
Cow position: chr1:32857269-32857051 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 217-426
Cow position: chr1:75080332-75080542 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 68

Conread position: 217-428
Cow position: chr1:52679797-52679596 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 54

Conread position: 217-438
Cow position: chr1:77892374-77892139 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 194

Conread position: 217-439
Cow position: chr1:34771292-34771503 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 37

Conread position: 217-439
Cow position: chr1:45478638-45478859 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 64

Conread position: 217-439
Cow position: chr1:73551295-73551510 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 153, 34

Conread position: 218-428
Cow position: chr1:77425318-77425112 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 43

Conread position: 218-439
Cow position: chr1:88360091-88359878 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 219-409
Cow position: chr1:70292008-70291816 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 66

Conread position: 219-419
Cow position: chr1:89341750-89341961 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 219-428
Cow position: chr1:92095588-92095382 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 28, 72

Conread position: 219-439
Cow position: chr1:57297702-57297482 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 137, 15

Conread position: 220-439
Cow position: chr1:22827365-22827157 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 33

Conread position: 220-439
Cow position: chr1:97232175-97231960 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 56

Conread position: 222-396
Cow position: chr1:68672374-68672560 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 222-419
Cow position: chr1:42822495-42822290 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 222-436
Cow position: chr1:45670844-45670638 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 222-437
Cow position: chr1:43872107-43872317 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 29

Conread position: 222-439
Cow position: chr1:98684092-98683874 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 83

Conread position: 224-439
Cow position: chr1:8670988-8670773 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 48

Conread position: 246-439
Cow position: chr1:84010959-84010772 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 247-400
Cow position: chr1:60478525-60478673 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 247-414
Cow position: chr1:49299855-49299686 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 247-419
Cow position: chr1:6986557-6986722 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 247-426
Cow position: chr1:45873879-45874056 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 50

Conread position: 247-428
Cow position: chr1:36613076-36613250 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 247-434
Cow position: chr1:98461483-98461291 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 184

Conread position: 247-436
Cow position: chr1:53640916-53640718 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 152

Conread position: 247-437
Cow position: chr1:8347320-8347125 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 42, 113

Conread position: 247-439
Cow position: chr1:19304768-19304572 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 35, 139

Conread position: 247-439
Cow position: chr1:65639091-65638914 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 29

Conread position: 247-439
Cow position: chr1:95153413-95153223 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 174, 0

Conread position: 248-402
Cow position: chr1:92999217-92999067 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 248-403
Cow position: chr1:37886620-37886777 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 46

Conread position: 248-406
Cow position: chr1:96136649-96136498 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 26

Conread position: 248-409
Cow position: chr1:78690403-78690246 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 42

Conread position: 248-439
Cow position: chr1:31855062-31855247 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 248-439
Cow position: chr1:48730641-48730829 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 173

Conread position: 248-439
Cow position: chr1:50992126-50991933 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 184

Conread position: 248-439
Cow position: chr1:52995222-52995024 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 189

Conread position: 248-439
Cow position: chr1:71253367-71253553 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 248-439
Cow position: chr1:98576244-98576047 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 9

Conread position: 250-424
Cow position: chr1:18780135-18780315 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 252-436
Cow position: chr1:44135984-44136164 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 12

Conread position: 255-419
Cow position: chr1:81452534-81452373 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 21

Conread position: 255-439
Cow position: chr1:85162368-85162547 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 74, 21

Conread position: 256-439
Cow position: chr1:81912979-81913151 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 260-412
Cow position: chr1:80306202-80306352 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 7

Conread position: 261-419
Cow position: chr1:55230155-55229995 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 95

Conread position: 263-419
Cow position: chr1:25194726-25194880 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 58

Conread position: 265-428
Cow position: chr1:65909685-65909521 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 72

Conread position: 267-439
Cow position: chr1:83783757-83783930 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 164

Conread position: 268-420
Cow position: chr1:69185561-69185711 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 269-414
Cow position: chr1:57359635-57359486 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 87

Conread position: 269-419
Cow position: chr1:81580346-81580197 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 269-428
Cow position: chr1:24791775-24791936 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 269-439
Cow position: chr1:23512494-23512659 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 269-439
Cow position: chr1:77880564-77880730 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 135

Conread position: 269-439
Cow position: chr1:90868278-90868441 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 270-437
Cow position: chr1:72285900-72286066 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 6

Conread position: 271-415
Cow position: chr1:63461049-63460901 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 271-419
Cow position: chr1:70416589-70416741 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 271-439
Cow position: chr1:11729342-11729175 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 0

Conread position: 271-439
Cow position: chr1:22035779-22035611 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 84

Conread position: 271-439
Cow position: chr1:22461068-22461238 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 78

Conread position: 272-439
Cow position: chr1:48769969-48769802 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 158

Conread position: 275-428
Cow position: chr1:46100677-46100830 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 275-437
Cow position: chr1:97939120-97938959 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 276-439
Cow position: chr1:28470993-28470826 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 159

Conread position: 278-419
Cow position: chr1:99024071-99024212 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 278-423
Cow position: chr1:69179682-69179536 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 35

Conread position: 278-439
Cow position: chr1:36875189-36875030 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 126

Conread position: 278-439
Cow position: chr1:67918917-67918757 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 74

Conread position: 280-400
Cow position: chr1:70001676-70001798 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 282-419
Cow position: chr1:96323085-96322941 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 282-439
Cow position: chr1:6972685-6972526 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 151

Conread position: 282-439
Cow position: chr1:64019365-64019521 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 147, 0

Conread position: 283-415
Cow position: chr1:3882305-3882436 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 12

Conread position: 283-415
Cow position: chr1:34318631-34318763 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 283-439
Cow position: chr1:81613547-81613389 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 149

Conread position: 285-404
Cow position: chr1:42404287-42404169 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 285-439
Cow position: chr1:85549928-85550078 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 287-413
Cow position: chr1:84787422-84787297 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 118

Conread position: 288-427
Cow position: chr1:70044504-70044369 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 109

Conread position: 290-419
Cow position: chr1:95072480-95072351 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 290-438
Cow position: chr1:10716644-10716498 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 290-439
Cow position: chr1:86579111-86578965 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 104

Conread position: 292-375
Cow position: chr1:44814524-44814607 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 292-439
Cow position: chr1:6826153-6826296 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 292-439
Cow position: chr1:101177661-101177515 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 86

Conread position: 293-428
Cow position: chr1:87149670-87149805 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-438
Cow position: chr1:9679308-9679167 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 23

Conread position: 293-439
Cow position: chr1:52912753-52912897 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 293-439
Cow position: chr1:67654176-67654320 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 294-407
Cow position: chr1:28985422-28985535 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 294-419
Cow position: chr1:29671080-29671205 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 294-428
Cow position: chr1:46172748-46172615 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 294-439
Cow position: chr1:759274-759418 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 294-439
Cow position: chr1:7971556-7971411 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 136

Conread position: 294-439
Cow position: chr1:95835656-95835798 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 22

Conread position: 295-399
Cow position: chr1:72069971-72070075 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 295-409
Cow position: chr1:57637692-57637577 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 295-439
Cow position: chr1:13576735-13576886 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 142

Conread position: 295-439
Cow position: chr1:71915977-71916119 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 119, 0

Conread position: 295-439
Cow position: chr1:90975944-90976088 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 47

Conread position: 296-403
Cow position: chr1:51628837-51628944 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 296-416
Cow position: chr1:7023263-7023143 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 297-439
Cow position: chr1:56711460-56711599 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 108

Conread position: 297-439
Cow position: chr1:77739862-77739722 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 297-439
Cow position: chr1:100474375-100474234 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 298-418
Cow position: chr1:15334031-15333912 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 298-428
Cow position: chr1:79409594-79409461 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 298-439
Cow position: chr1:22730876-22730734 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 134

Conread position: 298-439
Cow position: chr1:45315496-45315636 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 298-439
Cow position: chr1:53398116-53397975 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 132

Conread position: 298-439
Cow position: chr1:81481242-81481382 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 298-439
Cow position: chr1:88913459-88913320 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 299-439
Cow position: chr1:80422411-80422276 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 300-439
Cow position: chr1:45288735-45288871 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 301-402
Cow position: chr1:10822742-10822843 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 301-416
Cow position: chr1:42775047-42774932 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 25

Conread position: 301-419
Cow position: chr1:83606313-83606431 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 301-420
Cow position: chr1:42175864-42175745 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 301-439
Cow position: chr1:8287494-8287630 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 301-439
Cow position: chr1:49839621-49839485 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 301-439
Cow position: chr1:49980846-49980710 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 301-439
Cow position: chr1:54258705-54258567 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 55

Conread position: 301-439
Cow position: chr1:65318713-65318575 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 41

Conread position: 301-439
Cow position: chr1:72068695-72068835 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 132

Conread position: 301-439
Cow position: chr1:101280601-101280734 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 301-439
Cow position: chr1:102768314-102768181 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 302-419
Cow position: chr1:73960836-73960722 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 302-437
Cow position: chr1:31272307-31272440 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 302-437
Cow position: chr1:45019663-45019799 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 129

Conread position: 303-396
Cow position: chr1:25956030-25955937 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-419
Cow position: chr1:32035575-32035691 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 303-419
Cow position: chr1:75744999-75744881 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 303-436
Cow position: chr1:93590451-93590583 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 303-438
Cow position: chr1:4032767-4032633 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 51

Conread position: 303-439
Cow position: chr1:30983362-30983492 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 16

Conread position: 303-439
Cow position: chr1:31357374-31357509 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 53

Conread position: 303-439
Cow position: chr1:41027208-41027075 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 303-439
Cow position: chr1:89388479-89388340 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 303-439
Cow position: chr1:90621370-90621506 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 127

Conread position: 304-419
Cow position: chr1:33812349-33812235 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 39

Conread position: 304-438
Cow position: chr1:101788959-101789088 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 304-439
Cow position: chr1:63530694-63530558 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 126

Conread position: 305-420
Cow position: chr1:52506039-52506153 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 305-423
Cow position: chr1:71636191-71636308 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 305-428
Cow position: chr1:68730132-68730009 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 21

Conread position: 305-437
Cow position: chr1:101525792-101525923 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 305-438
Cow position: chr1:36998318-36998186 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 305-438
Cow position: chr1:49433131-49433263 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 305-438
Cow position: chr1:74081847-74081980 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 125

Conread position: 305-439
Cow position: chr1:242690-242557 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 305-439
Cow position: chr1:6381904-6381772 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 305-439
Cow position: chr1:68688716-68688583 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 305-439
Cow position: chr1:89449034-89448900 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 125

Conread position: 305-439
Cow position: chr1:95153004-95152871 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 49

Conread position: 306-434
Cow position: chr1:3923668-3923795 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 306-439
Cow position: chr1:63079139-63079010 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 307-419
Cow position: chr1:31256095-31256207 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 307-437
Cow position: chr1:101632205-101632335 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 123

Conread position: 307-438
Cow position: chr1:7740078-7739948 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 307-438
Cow position: chr1:98583884-98583753 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 123

Conread position: 307-439
Cow position: chr1:10778694-10778563 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 307-439
Cow position: chr1:96081611-96081480 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 52

Conread position: 308-439
Cow position: chr1:43499167-43499296 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 308-439
Cow position: chr1:61011311-61011181 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 309-437
Cow position: chr1:3914790-3914916 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 309-439
Cow position: chr1:24570818-24570947 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 309-439
Cow position: chr1:39068827-39068956 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 309-439
Cow position: chr1:53308265-53308389 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 309-439
Cow position: chr1:95974530-95974400 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 121

Conread position: 310-434
Cow position: chr1:31630159-31630282 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 310-439
Cow position: chr1:42545651-42545779 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 311-415
Cow position: chr1:100800642-100800746 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 13

Conread position: 311-418
Cow position: chr1:45283323-45283214 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 311-421
Cow position: chr1:42353287-42353178 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 34

Conread position: 311-428
Cow position: chr1:81638675-81638558 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 311-433
Cow position: chr1:61513194-61513314 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 311-439
Cow position: chr1:1956208-1956333 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 311-439
Cow position: chr1:65028658-65028534 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 311-439
Cow position: chr1:72011686-72011813 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 311-439
Cow position: chr1:93528828-93528699 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 103

Conread position: 312-439
Cow position: chr1:45555491-45555366 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 312-439
Cow position: chr1:69481824-69481948 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 312-439
Cow position: chr1:82880770-82880646 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 313-415
Cow position: chr1:98396760-98396862 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 313-416
Cow position: chr1:6941593-6941490 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 313-417
Cow position: chr1:78697647-78697751 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 313-419
Cow position: chr1:13828464-13828567 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 30

Conread position: 313-419
Cow position: chr1:25383795-25383687 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 313-420
Cow position: chr1:30417923-30418030 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 313-428
Cow position: chr1:43296594-43296710 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 98

Conread position: 313-428
Cow position: chr1:73494471-73494586 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 313-437
Cow position: chr1:56477719-56477594 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 118

Conread position: 313-438
Cow position: chr1:19997850-19997971 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 313-438
Cow position: chr1:32014321-32014199 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 313-438
Cow position: chr1:54157421-54157295 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 313-438
Cow position: chr1:73721486-73721361 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 22

Conread position: 313-438
Cow position: chr1:97611532-97611659 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 119

Conread position: 313-439
Cow position: chr1:20667618-20667742 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 313-439
Cow position: chr1:39224801-39224926 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 313-439
Cow position: chr1:42541724-42541598 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 117

Conread position: 313-439
Cow position: chr1:43311906-43312031 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 313-439
Cow position: chr1:46765001-46764876 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 36

Conread position: 313-439
Cow position: chr1:54156608-54156734 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 80

Conread position: 313-439
Cow position: chr1:54478454-54478329 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 42

Conread position: 313-439
Cow position: chr1:65881930-65881807 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 313-439
Cow position: chr1:69694869-69694992 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 6

Conread position: 313-439
Cow position: chr1:98512051-98511927 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 313-439
Cow position: chr1:99642243-99642367 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 107

Conread position: 313-439
Cow position: chr1:101507484-101507360 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 314-428
Cow position: chr1:96558725-96558839 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 38

Conread position: 314-437
Cow position: chr1:78857205-78857327 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 314-438
Cow position: chr1:84768755-84768878 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 314-439
Cow position: chr1:3352576-3352698 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 314-439
Cow position: chr1:45223705-45223581 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 314-439
Cow position: chr1:56225908-56225785 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 314-439
Cow position: chr1:67529179-67529055 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 41

Conread position: 314-439
Cow position: chr1:72813740-72813616 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 40

Conread position: 315-419
Cow position: chr1:64706615-64706512 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 315-419
Cow position: chr1:84288526-84288422 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 315-436
Cow position: chr1:5135587-5135707 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 315-436
Cow position: chr1:50930856-50930972 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 315-439
Cow position: chr1:34159959-34159835 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 116

Conread position: 315-439
Cow position: chr1:43311648-43311772 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 116

Conread position: 315-439
Cow position: chr1:55428833-55428957 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 38

Conread position: 315-439
Cow position: chr1:93554959-93554836 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 318-416
Cow position: chr1:8735-8637 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 318-419
Cow position: chr1:32787834-32787935 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 76

Conread position: 318-439
Cow position: chr1:95516159-95516039 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 319-436
Cow position: chr1:22192888-22192772 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 319-436
Cow position: chr1:69940704-69940820 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 319-439
Cow position: chr1:87197939-87197820 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 320-428
Cow position: chr1:81179225-81179338 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 322-439
Cow position: chr1:5006277-5006162 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 322-439
Cow position: chr1:30504617-30504501 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 323-433
Cow position: chr1:95215075-95215187 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 323-439
Cow position: chr1:37309404-37309519 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 324-439
Cow position: chr1:61542805-61542918 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 325-435
Cow position: chr1:6989263-6989154 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 327-439
Cow position: chr1:64572626-64572515 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 328-439
Cow position: chr1:44507083-44506973 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 328-439
Cow position: chr1:89350075-89349965 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 0

Show alignments to all cow chromosomes.