Cow genome map
| Conread name: | unkn-RMX602767752.R1 |
| Conread position: | 184-419 |
| Cow position: | chr12:31841766-31841544 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 197-409 |
| Cow position: | chr12:28598454-28598248 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 86 |
| Conread position: | 198-435 |
| Cow position: | chr12:32419162-32419411 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 166 |
| Conread position: | 200-368 |
| Cow position: | chr12:39674483-39674668 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 208-419 |
| Cow position: | chr12:25456594-25456383 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 208-428 |
| Cow position: | chr12:22752803-22752591 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 156, 8 |
| Conread position: | 208-439 |
| Cow position: | chr12:35368815-35368598 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 156, 16 |
| Conread position: | 209-415 |
| Cow position: | chr12:15832377-15832176 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 209-428 |
| Cow position: | chr12:43551046-43551256 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 15 |
| Conread position: | 209-439 |
| Cow position: | chr12:23836503-23836287 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 117, 7 |
| Conread position: | 210-415 |
| Cow position: | chr12:32392100-32391897 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 210-419 |
| Cow position: | chr12:27430690-27430481 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 210-419 |
| Cow position: | chr12:34473438-34473646 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 210-428 |
| Cow position: | chr12:28651293-28651079 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 210-428 |
| Cow position: | chr12:34165765-34165549 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 210-439 |
| Cow position: | chr12:7110378-7110153 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 211-418 |
| Cow position: | chr12:6958401-6958195 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 215-424 |
| Cow position: | chr12:22341423-22341215 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 217-437 |
| Cow position: | chr12:22882244-22882014 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 130 |
| Conread position: | 217-438 |
| Cow position: | chr12:18523747-18523521 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 217-439 |
| Cow position: | chr12:4596636-4596418 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 217-439 |
| Cow position: | chr12:6241487-6241275 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 218-379 |
| Cow position: | chr12:11950319-11950152 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 218-391 |
| Cow position: | chr12:2241650-2241828 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 218-419 |
| Cow position: | chr12:30919596-30919400 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 218-439 |
| Cow position: | chr12:4341573-4341788 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 218-439 |
| Cow position: | chr12:14131597-14131812 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 218-439 |
| Cow position: | chr12:25445099-25444870 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 219-428 |
| Cow position: | chr12:29200217-29200430 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 219-439 |
| Cow position: | chr12:45167847-45168063 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 220-403 |
| Cow position: | chr12:4014262-4014442 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 31 |
| Conread position: | 221-435 |
| Cow position: | chr12:33319491-33319708 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 221-437 |
| Cow position: | chr12:27572061-27572282 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 224-439 |
| Cow position: | chr12:8943059-8943268 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 97, 29 |
| Conread position: | 224-439 |
| Cow position: | chr12:18765789-18766017 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 219 |
| Conread position: | 247-382 |
| Cow position: | chr12:1848348-1848485 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 247-404 |
| Cow position: | chr12:4962778-4962624 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 247-426 |
| Cow position: | chr12:31960032-31959847 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 247-437 |
| Cow position: | chr12:6225998-6226186 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 112 |
| Conread position: | 247-437 |
| Cow position: | chr12:36993969-36994158 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 247-439 |
| Cow position: | chr12:3879836-3880024 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 247-439 |
| Cow position: | chr12:5543644-5543837 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 247-439 |
| Cow position: | chr12:7000459-7000647 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 247-439 |
| Cow position: | chr12:15163281-15163096 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 248-416 |
| Cow position: | chr12:18021001-18020836 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 248-436 |
| Cow position: | chr12:42143303-42143119 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 248-439 |
| Cow position: | chr12:6720471-6720283 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 249-393 |
| Cow position: | chr12:29770430-29770578 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 268-439 |
| Cow position: | chr12:1701678-1701849 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 269-438 |
| Cow position: | chr12:29779786-29779957 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 24, 164 |
| Conread position: | 271-437 |
| Cow position: | chr12:40157901-40158064 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 271-438 |
| Cow position: | chr12:26217700-26217868 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 271-439 |
| Cow position: | chr12:38774118-38774287 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 272-439 |
| Cow position: | chr12:37008584-37008747 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 275-415 |
| Cow position: | chr12:23912892-23913032 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 275-437 |
| Cow position: | chr12:27037331-27037492 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 275-439 |
| Cow position: | chr12:30819366-30819200 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 157 |
| Conread position: | 276-419 |
| Cow position: | chr12:17273552-17273407 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 276-439 |
| Cow position: | chr12:22859581-22859423 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 277-439 |
| Cow position: | chr12:11836352-11836190 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 278-419 |
| Cow position: | chr12:30226814-30226958 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 278-439 |
| Cow position: | chr12:45723428-45723272 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 279-378 |
| Cow position: | chr12:34459775-34459676 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 282-436 |
| Cow position: | chr12:42698134-42698290 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 137, 114 |
| Conread position: | 282-439 |
| Cow position: | chr12:7920353-7920198 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 282-439 |
| Cow position: | chr12:32715154-32715002 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 285-419 |
| Cow position: | chr12:25805021-25805157 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 287-404 |
| Cow position: | chr12:44846755-44846638 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 290-419 |
| Cow position: | chr12:17774898-17774769 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 291-430 |
| Cow position: | chr12:26357269-26357407 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 291-439 |
| Cow position: | chr12:42286074-42285926 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 139 |
| Conread position: | 292-416 |
| Cow position: | chr12:24663215-24663092 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 292-419 |
| Cow position: | chr12:20355318-20355190 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 292-439 |
| Cow position: | chr12:23574865-23574719 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 294-438 |
| Cow position: | chr12:45090252-45090393 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 70, 63 |
| Conread position: | 294-439 |
| Cow position: | chr12:35241008-35241149 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 295-416 |
| Cow position: | chr12:5839556-5839678 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 295-419 |
| Cow position: | chr12:29731413-29731289 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-439 |
| Cow position: | chr12:33949003-33948860 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 295-439 |
| Cow position: | chr12:37514183-37514325 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 297-439 |
| Cow position: | chr12:25814250-25814103 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 298-416 |
| Cow position: | chr12:48415420-48415538 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-437 |
| Cow position: | chr12:44542362-44542221 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 298-439 |
| Cow position: | chr12:3623790-3623650 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 298-439 |
| Cow position: | chr12:4866913-4866773 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 299-439 |
| Cow position: | chr12:17252104-17252242 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 301-417 |
| Cow position: | chr12:43474853-43474737 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-419 |
| Cow position: | chr12:18996903-18996785 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-419 |
| Cow position: | chr12:24397070-24397188 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 301-439 |
| Cow position: | chr12:4594598-4594457 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 301-439 |
| Cow position: | chr12:6410641-6410779 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 129 |
| Conread position: | 301-439 |
| Cow position: | chr12:7457450-7457587 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 301-439 |
| Cow position: | chr12:33851450-33851317 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 301-439 |
| Cow position: | chr12:42181036-42181173 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 302-439 |
| Cow position: | chr12:4769018-4768882 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 303-415 |
| Cow position: | chr12:25528469-25528581 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-433 |
| Cow position: | chr12:41159678-41159552 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 303-437 |
| Cow position: | chr12:18518764-18518631 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 303-439 |
| Cow position: | chr12:4797390-4797256 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 303-439 |
| Cow position: | chr12:9766786-9766921 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 303-439 |
| Cow position: | chr12:14986839-14986705 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 303-439 |
| Cow position: | chr12:15260852-15260719 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 303-439 |
| Cow position: | chr12:23106028-23105893 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 304-439 |
| Cow position: | chr12:5635363-5635497 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 305-439 |
| Cow position: | chr12:7902711-7902849 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 306-439 |
| Cow position: | chr12:47929288-47929157 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 307-436 |
| Cow position: | chr12:40269979-40270103 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 307-439 |
| Cow position: | chr12:3197355-3197225 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 308-439 |
| Cow position: | chr12:3586204-3586074 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 309-437 |
| Cow position: | chr12:34161497-34161372 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 309-439 |
| Cow position: | chr12:5906140-5906012 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 309-439 |
| Cow position: | chr12:33976285-33976155 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 309-439 |
| Cow position: | chr12:48578927-48578799 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 311-437 |
| Cow position: | chr12:31517089-31517213 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 311-439 |
| Cow position: | chr12:29057472-29057345 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 312-439 |
| Cow position: | chr12:7960502-7960626 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 118, 48 |
| Conread position: | 313-416 |
| Cow position: | chr12:30194782-30194679 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-430 |
| Cow position: | chr12:24023721-24023838 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-435 |
| Cow position: | chr12:41474170-41474049 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 313-437 |
| Cow position: | chr12:4135158-4135035 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 313-437 |
| Cow position: | chr12:30753800-30753678 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 313-438 |
| Cow position: | chr12:45014764-45014636 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 120 |
| Conread position: | 313-439 |
| Cow position: | chr12:15700161-15700034 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 313-439 |
| Cow position: | chr12:17881942-17881817 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 313-439 |
| Cow position: | chr12:24032577-24032452 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 313-439 |
| Cow position: | chr12:30210564-30210439 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 313-439 |
| Cow position: | chr12:31429490-31429612 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 313-439 |
| Cow position: | chr12:35770940-35771065 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 313-439 |
| Cow position: | chr12:43854974-43854850 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 313-439 |
| Cow position: | chr12:44517657-44517782 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 314-437 |
| Cow position: | chr12:16147569-16147447 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 114, 82 |
| Conread position: | 314-438 |
| Cow position: | chr12:1889498-1889621 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 314-439 |
| Cow position: | chr12:4793277-4793153 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 314-439 |
| Cow position: | chr12:18943578-18943702 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 314-439 |
| Cow position: | chr12:37993652-37993776 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 314-439 |
| Cow position: | chr12:45001988-45002111 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 315-419 |
| Cow position: | chr12:15122405-15122299 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 315-435 |
| Cow position: | chr12:7884602-7884721 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 315-439 |
| Cow position: | chr12:26749873-26749996 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 315-439 |
| Cow position: | chr12:39663120-39663244 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 318-439 |
| Cow position: | chr12:5714702-5714586 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 318-439 |
| Cow position: | chr12:6754272-6754152 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 319-434 |
| Cow position: | chr12:9229425-9229539 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 319-436 |
| Cow position: | chr12:25188263-25188145 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 319-439 |
| Cow position: | chr12:7311456-7311336 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 319-439 |
| Cow position: | chr12:14223056-14222937 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 319-439 |
| Cow position: | chr12:21780237-21780118 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 319-439 |
| Cow position: | chr12:34465929-34466048 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 320-423 |
| Cow position: | chr12:4512376-4512479 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 330-438 |
| Cow position: | chr12:18963864-18963971 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.