Cow genome map
| Conread name: | unkn-RMX602767752.R1 |
| Conread position: | 137-420 |
| Cow position: | chr18:50612269-50612552 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 45 |
| Conread position: | 141-439 |
| Cow position: | chr18:4673558-4673269 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 187-419 |
| Cow position: | chr18:11672251-11672023 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 193-437 |
| Cow position: | chr18:53039039-53038793 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 199-439 |
| Cow position: | chr18:45104245-45104480 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 204-419 |
| Cow position: | chr18:41724631-41724838 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 205-411 |
| Cow position: | chr18:39190289-39190507 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 185 |
| Conread position: | 207-439 |
| Cow position: | chr18:35693054-35692817 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 208-437 |
| Cow position: | chr18:5701440-5701212 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 209-383 |
| Cow position: | chr18:8390386-8390206 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 209-439 |
| Cow position: | chr18:21081703-21081930 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 70 |
| Conread position: | 210-439 |
| Cow position: | chr18:39875069-39875298 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 210-439 |
| Cow position: | chr18:40759396-40759168 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 210-439 |
| Cow position: | chr18:46072646-46072424 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 210-439 |
| Cow position: | chr18:51178538-51178767 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 211-408 |
| Cow position: | chr18:23921520-23921712 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 193, 65 |
| Conread position: | 211-419 |
| Cow position: | chr18:47806096-47806304 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 214-418 |
| Cow position: | chr18:9177097-9176881 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 211 |
| Conread position: | 214-419 |
| Cow position: | chr18:4489730-4489928 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 216-418 |
| Cow position: | chr18:56150295-56150494 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 217-402 |
| Cow position: | chr18:18320380-18320563 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 217-417 |
| Cow position: | chr18:36230538-36230741 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 122 |
| Conread position: | 217-424 |
| Cow position: | chr18:30921400-30921190 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 217-427 |
| Cow position: | chr18:35888920-35889125 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 217-437 |
| Cow position: | chr18:2619038-2619250 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 217-438 |
| Cow position: | chr18:43555345-43555562 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 217-439 |
| Cow position: | chr18:24343031-24342804 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 217-439 |
| Cow position: | chr18:24508065-24508275 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 202, 54 |
| Conread position: | 217-439 |
| Cow position: | chr18:27388764-27388545 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 218-439 |
| Cow position: | chr18:23163061-23162854 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 218-439 |
| Cow position: | chr18:37023370-37023589 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 219-419 |
| Cow position: | chr18:1954414-1954609 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 219-439 |
| Cow position: | chr18:47963805-47963586 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 220-439 |
| Cow position: | chr18:47547817-47548025 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 222-402 |
| Cow position: | chr18:42978469-42978648 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 222-417 |
| Cow position: | chr18:4796531-4796339 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 222-419 |
| Cow position: | chr18:3097862-3098052 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 222-437 |
| Cow position: | chr18:6609684-6609895 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 222-437 |
| Cow position: | chr18:51213017-51212805 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 222-439 |
| Cow position: | chr18:51192560-51192779 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 242-438 |
| Cow position: | chr18:21266664-21266468 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 246-437 |
| Cow position: | chr18:10656588-10656401 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 246-439 |
| Cow position: | chr18:39022415-39022217 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 190 |
| Conread position: | 247-375 |
| Cow position: | chr18:35478656-35478531 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 247-393 |
| Cow position: | chr18:35454523-35454663 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 247-402 |
| Cow position: | chr18:55736857-55736701 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 247-414 |
| Cow position: | chr18:4534877-4535039 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 150, 29 |
| Conread position: | 247-414 |
| Cow position: | chr18:11262996-11262822 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 146 |
| Conread position: | 247-419 |
| Cow position: | chr18:51867387-51867563 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 154 |
| Conread position: | 247-428 |
| Cow position: | chr18:52245351-52245179 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 149, 28 |
| Conread position: | 247-436 |
| Cow position: | chr18:35077411-35077216 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 248-424 |
| Cow position: | chr18:14091129-14090955 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 69, 99 |
| Conread position: | 248-439 |
| Cow position: | chr18:51392496-51392678 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 254-439 |
| Cow position: | chr18:33008207-33008024 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 137, 22 |
| Conread position: | 263-405 |
| Cow position: | chr18:5462552-5462694 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 263-439 |
| Cow position: | chr18:19433893-19433724 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 269-413 |
| Cow position: | chr18:871789-871650 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 269-439 |
| Cow position: | chr18:19788109-19787940 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 271-437 |
| Cow position: | chr18:48407869-48407702 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 160 |
| Conread position: | 271-439 |
| Cow position: | chr18:11867470-11867298 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 164 |
| Conread position: | 271-439 |
| Cow position: | chr18:24759527-24759695 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 271-439 |
| Cow position: | chr18:42427748-42427581 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 83 |
| Conread position: | 272-419 |
| Cow position: | chr18:49982857-49982710 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 275-397 |
| Cow position: | chr18:38438668-38438789 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 275-439 |
| Cow position: | chr18:4495761-4495925 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 277-439 |
| Cow position: | chr18:28923725-28923886 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 278-436 |
| Cow position: | chr18:22214609-22214452 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 278-438 |
| Cow position: | chr18:48828652-48828812 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 278-439 |
| Cow position: | chr18:39434948-39434788 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 279-419 |
| Cow position: | chr18:36750828-36750688 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-438 |
| Cow position: | chr18:19896331-19896489 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 280-439 |
| Cow position: | chr18:4872182-4872033 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 282-419 |
| Cow position: | chr18:38757718-38757858 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 284-395 |
| Cow position: | chr18:37810218-37810329 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 285-439 |
| Cow position: | chr18:19883647-19883493 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 285-439 |
| Cow position: | chr18:27109177-27109331 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 146 |
| Conread position: | 289-439 |
| Cow position: | chr18:9846297-9846449 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 143 |
| Conread position: | 290-439 |
| Cow position: | chr18:49324327-49324472 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 38 |
| Conread position: | 291-427 |
| Cow position: | chr18:21768723-21768587 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 132 |
| Conread position: | 291-439 |
| Cow position: | chr18:4556063-4556205 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 292-421 |
| Cow position: | chr18:33896311-33896439 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 292-439 |
| Cow position: | chr18:52414074-52413927 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 138 |
| Conread position: | 293-419 |
| Cow position: | chr18:4624044-4624170 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-439 |
| Cow position: | chr18:2773286-2773431 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 293-439 |
| Cow position: | chr18:16997360-16997215 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 293-439 |
| Cow position: | chr18:53642644-53642787 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 294-419 |
| Cow position: | chr18:2108351-2108227 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 294-437 |
| Cow position: | chr18:55000637-55000778 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 294-439 |
| Cow position: | chr18:17390889-17391032 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 137, 87 |
| Conread position: | 294-439 |
| Cow position: | chr18:52251754-52251896 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 295-437 |
| Cow position: | chr18:4757468-4757607 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 295-439 |
| Cow position: | chr18:9008229-9008091 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 295-439 |
| Cow position: | chr18:49038566-49038423 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 296-419 |
| Cow position: | chr18:56184038-56183915 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-437 |
| Cow position: | chr18:39168633-39168495 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 297-439 |
| Cow position: | chr18:48962038-48961895 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 134 |
| Conread position: | 298-419 |
| Cow position: | chr18:24022719-24022598 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 298-437 |
| Cow position: | chr18:18918859-18918995 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 298-439 |
| Cow position: | chr18:5632369-5632229 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 298-439 |
| Cow position: | chr18:12273759-12273619 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 298-439 |
| Cow position: | chr18:40047400-40047537 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 300-439 |
| Cow position: | chr18:48713650-48713512 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 301-419 |
| Cow position: | chr18:44917855-44917737 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-425 |
| Cow position: | chr18:47517107-47517230 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 301-433 |
| Cow position: | chr18:52658754-52658623 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 301-439 |
| Cow position: | chr18:3211977-3211839 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 301-439 |
| Cow position: | chr18:5078676-5078812 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 301-439 |
| Cow position: | chr18:12584741-12584878 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 301-439 |
| Cow position: | chr18:37189197-37189333 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 301-439 |
| Cow position: | chr18:46048850-46048713 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 303-419 |
| Cow position: | chr18:38937917-38937801 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-439 |
| Cow position: | chr18:15613765-15613899 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 305-416 |
| Cow position: | chr18:11856995-11856884 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 305-433 |
| Cow position: | chr18:45185966-45185838 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 305-433 |
| Cow position: | chr18:48452164-48452038 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 306-439 |
| Cow position: | chr18:47410636-47410504 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 306-439 |
| Cow position: | chr18:56181363-56181500 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 307-426 |
| Cow position: | chr18:44205992-44206111 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 95, 105 |
| Conread position: | 307-427 |
| Cow position: | chr18:22789993-22790116 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 307-438 |
| Cow position: | chr18:19273004-19273134 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 307-439 |
| Cow position: | chr18:1571145-1571274 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 307-439 |
| Cow position: | chr18:2863898-2864029 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 308-439 |
| Cow position: | chr18:25282462-25282592 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 309-419 |
| Cow position: | chr18:47872129-47872021 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 309-426 |
| Cow position: | chr18:53962336-53962453 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 309-427 |
| Cow position: | chr18:29390105-29390225 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 309-439 |
| Cow position: | chr18:4203840-4203967 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 309-439 |
| Cow position: | chr18:28657821-28657950 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 309-439 |
| Cow position: | chr18:48242282-48242151 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 310-439 |
| Cow position: | chr18:10322896-10322767 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 120 |
| Conread position: | 311-439 |
| Cow position: | chr18:24719401-24719274 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 312-416 |
| Cow position: | chr18:33159029-33158925 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-418 |
| Cow position: | chr18:44523174-44523066 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 313-416 |
| Cow position: | chr18:28322742-28322640 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 313-418 |
| Cow position: | chr18:5711567-5711673 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 313-419 |
| Cow position: | chr18:17660474-17660580 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-437 |
| Cow position: | chr18:30586139-30586258 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 313-439 |
| Cow position: | chr18:5647899-5647774 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 313-439 |
| Cow position: | chr18:11754216-11754091 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 313-439 |
| Cow position: | chr18:20641410-20641535 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 313-439 |
| Cow position: | chr18:45985538-45985664 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 314-412 |
| Cow position: | chr18:30341099-30341197 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-439 |
| Cow position: | chr18:50359417-50359293 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 315-409 |
| Cow position: | chr18:41011098-41011192 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-419 |
| Cow position: | chr18:18844100-18843997 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 315-421 |
| Cow position: | chr18:49197503-49197397 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-439 |
| Cow position: | chr18:2146495-2146618 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 315-439 |
| Cow position: | chr18:10977127-10977249 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 315-439 |
| Cow position: | chr18:50082173-50082296 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 315-439 |
| Cow position: | chr18:51405827-51405945 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 318-419 |
| Cow position: | chr18:49602962-49603063 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 318-439 |
| Cow position: | chr18:11377445-11377326 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 318-439 |
| Cow position: | chr18:11657737-11657618 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 318-439 |
| Cow position: | chr18:45558229-45558108 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 81, 112 |
| Conread position: | 318-439 |
| Cow position: | chr18:51691381-51691501 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 319-439 |
| Cow position: | chr18:47525488-47525369 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 320-439 |
| Cow position: | chr18:47486122-47486005 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 320-439 |
| Cow position: | chr18:51643287-51643404 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 323-439 |
| Cow position: | chr18:18369286-18369398 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 323-439 |
| Cow position: | chr18:44801813-44801928 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 332-439 |
| Cow position: | chr18:4182121-4182226 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.