Cow genome map
| Conread name: | unkn-RMX602767752.R1 |
| Conread position: | 141-437 |
| Cow position: | chr21:15280014-15279726 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 194-392 |
| Cow position: | chr21:8452203-8452008 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 191, 11 |
| Conread position: | 199-427 |
| Cow position: | chr21:42680313-42680533 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 120, 52 |
| Conread position: | 202-439 |
| Cow position: | chr21:41621409-41621183 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 206-439 |
| Cow position: | chr21:13584775-13585001 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 210-419 |
| Cow position: | chr21:21479019-21479224 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 210-419 |
| Cow position: | chr21:44825602-44825812 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 210-420 |
| Cow position: | chr21:34010124-34010320 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 210-439 |
| Cow position: | chr21:13365637-13365401 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 44, 206 |
| Conread position: | 210-439 |
| Cow position: | chr21:36682599-36682383 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 212-418 |
| Cow position: | chr21:48334515-48334716 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 193, 39 |
| Conread position: | 214-419 |
| Cow position: | chr21:46264459-46264247 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 214-437 |
| Cow position: | chr21:27568891-27569109 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 217-408 |
| Cow position: | chr21:5962073-5961865 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 155 |
| Conread position: | 217-419 |
| Cow position: | chr21:8986291-8986099 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 217-424 |
| Cow position: | chr21:37360974-37361170 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 217-426 |
| Cow position: | chr21:39888461-39888669 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 217-436 |
| Cow position: | chr21:34776850-34777059 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 217-437 |
| Cow position: | chr21:18568358-18568579 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 217-438 |
| Cow position: | chr21:44591938-44592150 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 217-438 |
| Cow position: | chr21:47363459-47363677 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 217-439 |
| Cow position: | chr21:3818483-3818267 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 217-439 |
| Cow position: | chr21:40432729-40432503 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 107 |
| Conread position: | 218-439 |
| Cow position: | chr21:42384800-42384566 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 225 |
| Conread position: | 219-396 |
| Cow position: | chr21:652292-652477 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 219-403 |
| Cow position: | chr21:35569076-35569271 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 219-438 |
| Cow position: | chr21:30255994-30256210 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 63 |
| Conread position: | 222-439 |
| Cow position: | chr21:28924384-28924167 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 222-439 |
| Cow position: | chr21:30157525-30157747 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 222-439 |
| Cow position: | chr21:34390695-34390917 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 215 |
| Conread position: | 227-438 |
| Cow position: | chr21:26245185-26244973 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 244-416 |
| Cow position: | chr21:7268629-7268802 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 247-396 |
| Cow position: | chr21:11057633-11057781 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 247-415 |
| Cow position: | chr21:40305198-40305024 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 247-419 |
| Cow position: | chr21:42131112-42131278 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 247-419 |
| Cow position: | chr21:42562875-42562707 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 70, 36 |
| Conread position: | 247-420 |
| Cow position: | chr21:48478647-48478821 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 115 |
| Conread position: | 247-435 |
| Cow position: | chr21:3400589-3400769 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 247-439 |
| Cow position: | chr21:13164108-13163917 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 247-439 |
| Cow position: | chr21:36795850-36795661 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 247-439 |
| Cow position: | chr21:42841359-42841539 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 248-427 |
| Cow position: | chr21:25159417-25159238 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 162, 28 |
| Conread position: | 248-438 |
| Cow position: | chr21:29014312-29014500 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 248-439 |
| Cow position: | chr21:33958-33777 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 248-439 |
| Cow position: | chr21:30980334-30980519 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 251-439 |
| Cow position: | chr21:42413857-42414040 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 50 |
| Conread position: | 256-439 |
| Cow position: | chr21:14228041-14228222 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 263-439 |
| Cow position: | chr21:33563234-33563066 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 267-436 |
| Cow position: | chr21:24797882-24797718 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 269-388 |
| Cow position: | chr21:40573831-40573951 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 269-419 |
| Cow position: | chr21:734816-734667 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 269-439 |
| Cow position: | chr21:7581678-7581847 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 269-439 |
| Cow position: | chr21:10538030-10538197 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 269-439 |
| Cow position: | chr21:27624926-27624756 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 161 |
| Conread position: | 270-439 |
| Cow position: | chr21:265856-265682 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 271-439 |
| Cow position: | chr21:31279482-31279314 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 272-428 |
| Cow position: | chr21:46470407-46470254 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 275-427 |
| Cow position: | chr21:30658091-30657939 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 276-424 |
| Cow position: | chr21:18800312-18800462 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 145 |
| Conread position: | 276-437 |
| Cow position: | chr21:12801529-12801689 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 154, 51 |
| Conread position: | 278-415 |
| Cow position: | chr21:12200318-12200181 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-435 |
| Cow position: | chr21:10633423-10633575 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 279-419 |
| Cow position: | chr21:39401799-39401668 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 280-439 |
| Cow position: | chr21:42135401-42135558 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 282-408 |
| Cow position: | chr21:42465999-42465876 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 283-428 |
| Cow position: | chr21:18779763-18779907 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 283-439 |
| Cow position: | chr21:17265787-17265943 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 283-439 |
| Cow position: | chr21:19359961-19360118 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 36, 148 |
| Conread position: | 283-439 |
| Cow position: | chr21:30119907-30119752 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 283-439 |
| Cow position: | chr21:45920846-45921000 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 287-439 |
| Cow position: | chr21:41610379-41610225 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 72, 145 |
| Conread position: | 288-439 |
| Cow position: | chr21:23587090-23586940 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 289-439 |
| Cow position: | chr21:29485185-29485040 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 291-428 |
| Cow position: | chr21:26567574-26567711 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 291-438 |
| Cow position: | chr21:5341888-5342035 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 139 |
| Conread position: | 291-438 |
| Cow position: | chr21:5406021-5405875 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 293-437 |
| Cow position: | chr21:45473554-45473698 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 138 |
| Conread position: | 294-416 |
| Cow position: | chr21:27744226-27744105 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 294-436 |
| Cow position: | chr21:37706215-37706354 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 295-401 |
| Cow position: | chr21:42958547-42958653 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-418 |
| Cow position: | chr21:30835564-30835441 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-439 |
| Cow position: | chr21:23321877-23322020 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 296-439 |
| Cow position: | chr21:1591747-1591612 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 297-439 |
| Cow position: | chr21:29069127-29069269 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 98, 133 |
| Conread position: | 298-413 |
| Cow position: | chr21:9346623-9346505 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 298-414 |
| Cow position: | chr21:45329753-45329868 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 298-438 |
| Cow position: | chr21:48482332-48482469 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 298-439 |
| Cow position: | chr21:7768636-7768496 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 298-439 |
| Cow position: | chr21:17642788-17642926 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 298-439 |
| Cow position: | chr21:30222543-30222403 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 298-439 |
| Cow position: | chr21:41287595-41287735 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 299-409 |
| Cow position: | chr21:37495746-37495859 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-434 |
| Cow position: | chr21:42017408-42017541 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 301-439 |
| Cow position: | chr21:11739925-11740061 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 303-403 |
| Cow position: | chr21:8506353-8506453 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-403 |
| Cow position: | chr21:8509241-8509341 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-439 |
| Cow position: | chr21:643517-643382 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 303-439 |
| Cow position: | chr21:24875546-24875410 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 127 |
| Conread position: | 303-439 |
| Cow position: | chr21:28030481-28030347 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 303-439 |
| Cow position: | chr21:43259412-43259277 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 305-439 |
| Cow position: | chr21:641778-641645 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 305-439 |
| Cow position: | chr21:3585178-3585310 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 305-439 |
| Cow position: | chr21:41598002-41597869 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 305-439 |
| Cow position: | chr21:44565531-44565659 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 306-411 |
| Cow position: | chr21:30205183-30205288 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-416 |
| Cow position: | chr21:34654263-34654153 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-435 |
| Cow position: | chr21:8213092-8213216 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 307-437 |
| Cow position: | chr21:41579945-41579816 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 307-439 |
| Cow position: | chr21:868734-868866 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 307-439 |
| Cow position: | chr21:14452425-14452292 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 307-439 |
| Cow position: | chr21:26735593-26735467 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 307-439 |
| Cow position: | chr21:32559176-32559307 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 307-439 |
| Cow position: | chr21:42007273-42007403 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 307-439 |
| Cow position: | chr21:44214315-44214185 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 309-439 |
| Cow position: | chr21:22939957-22939825 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 91, 125 |
| Conread position: | 311-428 |
| Cow position: | chr21:37344916-37345033 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-438 |
| Cow position: | chr21:4399987-4399862 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 313-418 |
| Cow position: | chr21:14760748-14760643 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-419 |
| Cow position: | chr21:46451771-46451877 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-430 |
| Cow position: | chr21:5464931-5464814 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-433 |
| Cow position: | chr21:29418751-29418636 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 313-437 |
| Cow position: | chr21:47763935-47764057 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 313-438 |
| Cow position: | chr21:40059213-40059087 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 102, 118 |
| Conread position: | 313-439 |
| Cow position: | chr21:6051686-6051561 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 313-439 |
| Cow position: | chr21:10673304-10673179 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 313-439 |
| Cow position: | chr21:15976815-15976691 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 313-439 |
| Cow position: | chr21:25383209-25383082 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 118 |
| Conread position: | 313-439 |
| Cow position: | chr21:29978577-29978702 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 313-439 |
| Cow position: | chr21:36508417-36508296 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 313-439 |
| Cow position: | chr21:38720430-38720308 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 313-439 |
| Cow position: | chr21:38900955-38900832 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 313-439 |
| Cow position: | chr21:40291565-40291688 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 313-439 |
| Cow position: | chr21:46848945-46849069 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 313-439 |
| Cow position: | chr21:47713827-47713946 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 314-411 |
| Cow position: | chr21:27568075-27567979 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 314-418 |
| Cow position: | chr21:17184099-17183995 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-418 |
| Cow position: | chr21:41051070-41050967 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 314-439 |
| Cow position: | chr21:396049-395926 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 115, 95 |
| Conread position: | 314-439 |
| Cow position: | chr21:20160858-20160734 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 40 |
| Conread position: | 314-439 |
| Cow position: | chr21:32339558-32339682 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 314-439 |
| Cow position: | chr21:41041125-41041002 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 315-424 |
| Cow position: | chr21:6998128-6998019 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-437 |
| Cow position: | chr21:8686962-8687083 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 315-439 |
| Cow position: | chr21:802136-802259 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 315-439 |
| Cow position: | chr21:28191213-28191092 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 315-439 |
| Cow position: | chr21:40475679-40475557 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 316-419 |
| Cow position: | chr21:5214528-5214425 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 316-423 |
| Cow position: | chr21:7493093-7493200 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 318-439 |
| Cow position: | chr21:10004708-10004827 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 318-439 |
| Cow position: | chr21:15584241-15584361 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 319-439 |
| Cow position: | chr21:5427114-5426998 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 319-439 |
| Cow position: | chr21:6736012-6736131 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 319-439 |
| Cow position: | chr21:44671921-44671803 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 320-439 |
| Cow position: | chr21:471850-471734 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 321-439 |
| Cow position: | chr21:46132749-46132632 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 322-438 |
| Cow position: | chr21:38267888-38268003 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 322-439 |
| Cow position: | chr21:7823538-7823420 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 323-439 |
| Cow position: | chr21:12207629-12207744 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
Show alignments to all cow chromosomes.