Cow genome map

Conread name: unkn-RMX602767752.R1

Conread position: 174-439
Cow position: chr22:2876554-2876807 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 6, 80

Conread position: 202-439
Cow position: chr22:26075162-26074912 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 112

Conread position: 204-418
Cow position: chr22:12914844-12914625 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 83

Conread position: 207-436
Cow position: chr22:16621400-16621170 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 128

Conread position: 208-420
Cow position: chr22:45683827-45684030 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 208-439
Cow position: chr22:1541111-1540892 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 208-439
Cow position: chr22:9372732-9372512 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 156, 16

Conread position: 208-439
Cow position: chr22:25846103-25846331 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 8

Conread position: 209-419
Cow position: chr22:22266526-22266318 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 8

Conread position: 209-439
Cow position: chr22:13878410-13878172 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 197

Conread position: 210-409
Cow position: chr22:40590996-40590799 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 12

Conread position: 210-416
Cow position: chr22:33031014-33030811 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 81, 41

Conread position: 210-436
Cow position: chr22:34750892-34750669 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 14

Conread position: 210-439
Cow position: chr22:22155842-22155596 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 154

Conread position: 210-439
Cow position: chr22:24802485-24802709 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 65

Conread position: 211-412
Cow position: chr22:25312717-25312526 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 211-439
Cow position: chr22:6593589-6593803 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 211-439
Cow position: chr22:10338902-10339124 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 74

Conread position: 212-437
Cow position: chr22:3842820-3842613 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 212-439
Cow position: chr22:11468606-11468360 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 14, 116

Conread position: 212-439
Cow position: chr22:13222328-13222106 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 183
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 198, 33

Conread position: 212-439
Cow position: chr22:23036391-23036155 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 6, 227

Conread position: 213-418
Cow position: chr22:26316674-26316467 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 69

Conread position: 214-396
Cow position: chr22:1563039-1563220 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 54

Conread position: 214-439
Cow position: chr22:23372659-23372873 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 215-438
Cow position: chr22:25236929-25237149 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 39

Conread position: 217-374
Cow position: chr22:22553049-22553204 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 102, 59

Conread position: 217-388
Cow position: chr22:11971495-11971666 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 39

Conread position: 217-419
Cow position: chr22:14690761-14690961 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 62

Conread position: 217-423
Cow position: chr22:2516676-2516901 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 217-429
Cow position: chr22:16058193-16057977 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 13

Conread position: 217-434
Cow position: chr22:27274491-27274704 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 34, 58

Conread position: 217-438
Cow position: chr22:12188276-12188489 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 147, 44

Conread position: 217-438
Cow position: chr22:12195362-12195576 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 147, 44

Conread position: 217-438
Cow position: chr22:43237203-43237416 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 217-439
Cow position: chr22:3240125-3239903 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 109

Conread position: 217-439
Cow position: chr22:4310171-4310380 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 126, 35

Conread position: 217-439
Cow position: chr22:11352248-11352461 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 217-439
Cow position: chr22:13841371-13841131 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 217

Conread position: 217-439
Cow position: chr22:26339962-26339745 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 71

Conread position: 219-390
Cow position: chr22:11206534-11206369 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 99

Conread position: 219-439
Cow position: chr22:27431488-27431711 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 119

Conread position: 220-403
Cow position: chr22:27643948-27643763 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 61

Conread position: 220-439
Cow position: chr22:10567509-10567723 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 33

Conread position: 222-419
Cow position: chr22:31510170-31510370 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 60

Conread position: 222-428
Cow position: chr22:26490715-26490501 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 30

Conread position: 222-437
Cow position: chr22:26123101-26122890 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 223-439
Cow position: chr22:24610891-24611101 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 73

Conread position: 231-378
Cow position: chr22:40750155-40750302 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 232-396
Cow position: chr22:10315279-10315109 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 235-425
Cow position: chr22:4974179-4974370 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 72

Conread position: 245-403
Cow position: chr22:29325472-29325626 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 246-427
Cow position: chr22:23397783-23397973 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 247-396
Cow position: chr22:8504512-8504372 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 247-400
Cow position: chr22:13327079-13326923 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 247-413
Cow position: chr22:3486604-3486762 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 247-415
Cow position: chr22:20847035-20846870 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 247-425
Cow position: chr22:35753125-35753304 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 49

Conread position: 247-435
Cow position: chr22:21215891-21215707 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 247-437
Cow position: chr22:26969974-26969776 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 54, 29

Conread position: 247-439
Cow position: chr22:8710186-8710382 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 187

Conread position: 247-439
Cow position: chr22:10421212-10421023 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 36

Conread position: 247-439
Cow position: chr22:10752361-10752551 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 247-439
Cow position: chr22:16044240-16044425 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 113, 29

Conread position: 247-439
Cow position: chr22:16845234-16845413 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 53

Conread position: 247-439
Cow position: chr22:21530171-21530369 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 189

Conread position: 247-439
Cow position: chr22:28665461-28665274 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 247-439
Cow position: chr22:37324733-37324535 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 120

Conread position: 247-439
Cow position: chr22:44180772-44180584 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 117, 69

Conread position: 248-388
Cow position: chr22:23695208-23695349 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 61

Conread position: 248-403
Cow position: chr22:23440117-23440270 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 248-416
Cow position: chr22:3250825-3250981 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 248-416
Cow position: chr22:10324066-10323893 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 248-419
Cow position: chr22:749233-749403 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 248-421
Cow position: chr22:27047238-27047403 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 36

Conread position: 248-437
Cow position: chr22:10286147-10285961 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 136, 28

Conread position: 248-439
Cow position: chr22:34104489-34104681 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 183

Conread position: 262-409
Cow position: chr22:14372339-14372190 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 262-419
Cow position: chr22:1977914-1977759 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 267-437
Cow position: chr22:8331161-8330991 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 165

Conread position: 269-375
Cow position: chr22:21145438-21145544 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 269-401
Cow position: chr22:531318-531451 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 269-404
Cow position: chr22:10533754-10533618 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 269-419
Cow position: chr22:6372183-6372336 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 11

Conread position: 269-439
Cow position: chr22:3950414-3950243 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 123

Conread position: 269-439
Cow position: chr22:8115932-8116097 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 96, 42

Conread position: 269-439
Cow position: chr22:17294777-17294945 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 270-439
Cow position: chr22:32188697-32188863 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 157, 43

Conread position: 271-439
Cow position: chr22:8090373-8090537 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 129

Conread position: 271-439
Cow position: chr22:25221741-25221904 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 76

Conread position: 275-402
Cow position: chr22:14815953-14816081 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 275-439
Cow position: chr22:3965340-3965177 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 155, 0

Conread position: 275-439
Cow position: chr22:22606380-22606216 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 155

Conread position: 276-427
Cow position: chr22:45788760-45788612 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 73

Conread position: 277-439
Cow position: chr22:14140143-14139978 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 81

Conread position: 277-439
Cow position: chr22:21235283-21235440 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 48

Conread position: 277-439
Cow position: chr22:27328740-27328901 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 144

Conread position: 278-439
Cow position: chr22:3317273-3317112 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 76

Conread position: 278-439
Cow position: chr22:28704333-28704175 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 279-402
Cow position: chr22:26659194-26659069 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 281-439
Cow position: chr22:7361834-7361986 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 282-407
Cow position: chr22:41682281-41682406 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 282-418
Cow position: chr22:31064547-31064414 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 282-418
Cow position: chr22:31309031-31308895 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 282-436
Cow position: chr22:6326592-6326438 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 148

Conread position: 283-419
Cow position: chr22:1871244-1871108 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 286-432
Cow position: chr22:3997896-3997751 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 143, 0

Conread position: 286-439
Cow position: chr22:34726808-34726659 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 73

Conread position: 287-439
Cow position: chr22:14509337-14509486 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 290-396
Cow position: chr22:26166485-26166593 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 290-439
Cow position: chr22:1983987-1983839 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 291-396
Cow position: chr22:8480240-8480136 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 55

Conread position: 291-439
Cow position: chr22:23176304-23176450 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 291-439
Cow position: chr22:24032077-24032224 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 62

Conread position: 291-439
Cow position: chr22:31154093-31153944 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 140

Conread position: 292-415
Cow position: chr22:27591331-27591208 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-439
Cow position: chr22:28146812-28146667 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 293-417
Cow position: chr22:28120862-28120736 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 293-419
Cow position: chr22:4017609-4017487 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 61

Conread position: 294-419
Cow position: chr22:4315764-4315640 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 294-426
Cow position: chr22:7512749-7512618 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 295-437
Cow position: chr22:8287317-8287180 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 295-439
Cow position: chr22:28057916-28058059 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 134, 0

Conread position: 295-439
Cow position: chr22:44741211-44741067 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 135

Conread position: 297-439
Cow position: chr22:21295593-21295733 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 298-439
Cow position: chr22:4656912-4657052 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 55

Conread position: 298-439
Cow position: chr22:5595678-5595818 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 57

Conread position: 301-403
Cow position: chr22:14141214-14141316 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 52

Conread position: 301-436
Cow position: chr22:1320622-1320486 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 301-438
Cow position: chr22:18933584-18933724 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 131

Conread position: 301-439
Cow position: chr22:1776188-1776050 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 130

Conread position: 301-439
Cow position: chr22:21890232-21890365 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 302-439
Cow position: chr22:23398277-23398413 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 51

Conread position: 303-413
Cow position: chr22:9735395-9735285 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-416
Cow position: chr22:7518681-7518568 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-419
Cow position: chr22:16813922-16813808 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 303-439
Cow position: chr22:1821459-1821594 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 303-439
Cow position: chr22:6852455-6852592 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 54

Conread position: 303-439
Cow position: chr22:11130996-11130861 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 303-439
Cow position: chr22:11613552-11613415 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 128

Conread position: 305-414
Cow position: chr22:8357710-8357601 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 305-414
Cow position: chr22:23675844-23675953 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 305-416
Cow position: chr22:27052609-27052720 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 305-419
Cow position: chr22:2100822-2100936 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 305-435
Cow position: chr22:4060823-4060952 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 305-437
Cow position: chr22:24915961-24915830 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 305-439
Cow position: chr22:17652559-17652426 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 306-439
Cow position: chr22:14381782-14381650 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 307-403
Cow position: chr22:2201862-2201766 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 307-419
Cow position: chr22:45771902-45772014 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 307-437
Cow position: chr22:40789687-40789559 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 307-439
Cow position: chr22:534621-534490 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 307-439
Cow position: chr22:42050691-42050565 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 309-414
Cow position: chr22:8447034-8446929 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 309-438
Cow position: chr22:1501013-1500883 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 29

Conread position: 309-439
Cow position: chr22:23249608-23249738 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 10

Conread position: 311-437
Cow position: chr22:20626956-20626830 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 119

Conread position: 311-439
Cow position: chr22:8733219-8733347 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 42

Conread position: 311-439
Cow position: chr22:9171526-9171399 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 312-438
Cow position: chr22:6096900-6097025 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 312-439
Cow position: chr22:28672263-28672136 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 119

Conread position: 313-415
Cow position: chr22:6486078-6485976 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 35

Conread position: 313-417
Cow position: chr22:12777261-12777365 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 313-419
Cow position: chr22:35533120-35533222 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 313-427
Cow position: chr22:44684601-44684489 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 313-435
Cow position: chr22:6360068-6360189 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 44

Conread position: 313-437
Cow position: chr22:14924616-14924739 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 313-437
Cow position: chr22:33399372-33399497 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 109

Conread position: 313-437
Cow position: chr22:35029384-35029262 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 313-438
Cow position: chr22:12157727-12157852 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 117

Conread position: 313-438
Cow position: chr22:17129127-17129003 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 45

Conread position: 313-439
Cow position: chr22:877631-877506 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 313-439
Cow position: chr22:2912474-2912595 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 313-439
Cow position: chr22:8481758-8481635 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 313-439
Cow position: chr22:9597464-9597587 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 70

Conread position: 313-439
Cow position: chr22:10553569-10553694 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 109
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 0

Conread position: 313-439
Cow position: chr22:12678306-12678431 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 313-439
Cow position: chr22:12967954-12968078 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 313-439
Cow position: chr22:15490770-15490644 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 106, 121

Conread position: 313-439
Cow position: chr22:25387444-25387318 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 64

Conread position: 313-439
Cow position: chr22:25540115-25539990 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 313-439
Cow position: chr22:25742833-25742958 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 313-439
Cow position: chr22:37029492-37029613 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 314-416
Cow position: chr22:7832240-7832341 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 314-439
Cow position: chr22:5616416-5616293 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 314-439
Cow position: chr22:12315925-12315802 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 314-439
Cow position: chr22:30049451-30049575 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 315-419
Cow position: chr22:6327653-6327759 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 315-419
Cow position: chr22:28071672-28071569 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 315-428
Cow position: chr22:12599485-12599372 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 315-437
Cow position: chr22:37201962-37201842 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 315-438
Cow position: chr22:16346510-16346388 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 315-439
Cow position: chr22:2627694-2627567 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 119

Conread position: 318-439
Cow position: chr22:12749790-12749910 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 318-439
Cow position: chr22:23857157-23857037 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 36

Conread position: 318-439
Cow position: chr22:34616417-34616297 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 318-439
Cow position: chr22:45846252-45846134 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 319-418
Cow position: chr22:47555958-47555859 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 319-437
Cow position: chr22:1081898-1081781 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 319-438
Cow position: chr22:4075776-4075895 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 111

Conread position: 319-439
Cow position: chr22:11344618-11344501 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 319-439
Cow position: chr22:14006287-14006168 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 319-439
Cow position: chr22:15025000-15025119 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 319-439
Cow position: chr22:42618109-42617991 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 320-438
Cow position: chr22:25943584-25943467 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 34

Conread position: 321-437
Cow position: chr22:17814340-17814226 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.