Cow genome map

Conread name: unkn-RMX602767752.R1

Conread position: 208-439
Cow position: chr29:11527561-11527797 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 194

Conread position: 209-439
Cow position: chr29:22175898-22175673 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 0

Conread position: 210-416
Cow position: chr29:23155441-23155240 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 14

Conread position: 214-439
Cow position: chr29:8004720-8004930 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 217-416
Cow position: chr29:27858988-27858799 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 179, 61

Conread position: 217-416
Cow position: chr29:29940868-29940654 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 217-433
Cow position: chr29:749691-749907 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 152

Conread position: 217-437
Cow position: chr29:13028650-13028438 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 83

Conread position: 217-437
Cow position: chr29:40298796-40299026 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 33, 223

Conread position: 217-438
Cow position: chr29:22518921-22519134 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 150, 59

Conread position: 217-439
Cow position: chr29:8926250-8926469 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 58

Conread position: 217-439
Cow position: chr29:38581192-38580972 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 82

Conread position: 218-356
Cow position: chr29:19586980-19587121 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 102

Conread position: 218-438
Cow position: chr29:39329384-39329610 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 33, 81

Conread position: 218-439
Cow position: chr29:11042642-11042424 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 62

Conread position: 218-439
Cow position: chr29:21645516-21645310 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 33

Conread position: 218-439
Cow position: chr29:36220743-36220526 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 6, 40

Conread position: 219-385
Cow position: chr29:6033915-6034096 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 219-402
Cow position: chr29:27042252-27042073 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 219-427
Cow position: chr29:35070875-35071081 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 190, 82

Conread position: 219-439
Cow position: chr29:19125528-19125314 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 221-439
Cow position: chr29:2262785-2263000 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 33, 64

Conread position: 223-415
Cow position: chr29:28949179-28948989 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 49

Conread position: 246-439
Cow position: chr29:11397751-11397934 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 247-404
Cow position: chr29:2533463-2533310 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 247-418
Cow position: chr29:33393849-33393690 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 247-435
Cow position: chr29:11647275-11647090 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 118, 43

Conread position: 247-439
Cow position: chr29:25333281-25333467 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 247-439
Cow position: chr29:34760240-34760421 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 247-439
Cow position: chr29:40097142-40096958 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 50

Conread position: 248-416
Cow position: chr29:42771813-42771651 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 248-419
Cow position: chr29:18579659-18579824 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 248-419
Cow position: chr29:34688015-34687846 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 248-436
Cow position: chr29:32290797-32290604 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 20

Conread position: 248-439
Cow position: chr29:6844450-6844640 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 154, 172

Conread position: 249-437
Cow position: chr29:13373480-13373291 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 149, 27

Conread position: 265-437
Cow position: chr29:13372830-13372658 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 80

Conread position: 269-416
Cow position: chr29:17022311-17022164 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 269-418
Cow position: chr29:32301912-32301763 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 85

Conread position: 269-436
Cow position: chr29:10156147-10156306 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 273-439
Cow position: chr29:16672646-16672483 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 18

Conread position: 277-437
Cow position: chr29:35501496-35501660 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 157

Conread position: 278-419
Cow position: chr29:28559531-28559391 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 278-439
Cow position: chr29:16365732-16365897 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 279-418
Cow position: chr29:703064-703201 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 281-439
Cow position: chr29:26653891-26654054 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 282-439
Cow position: chr29:1022443-1022288 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 282-439
Cow position: chr29:6286015-6286169 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 284-417
Cow position: chr29:19059937-19060069 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 285-433
Cow position: chr29:6870621-6870767 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 21

Conread position: 289-438
Cow position: chr29:28979359-28979505 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 116

Conread position: 290-409
Cow position: chr29:26631181-26631062 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 290-427
Cow position: chr29:40615357-40615490 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 290-439
Cow position: chr29:12783823-12783968 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 78

Conread position: 291-435
Cow position: chr29:13867068-13867214 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 63

Conread position: 291-439
Cow position: chr29:13639227-13639375 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 139

Conread position: 292-420
Cow position: chr29:8798877-8799005 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-439
Cow position: chr29:12680290-12680148 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 294-402
Cow position: chr29:935054-934949 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 294-419
Cow position: chr29:501333-501208 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 294-433
Cow position: chr29:629674-629536 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 136, 0

Conread position: 297-435
Cow position: chr29:24051249-24051385 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 298-412
Cow position: chr29:4070756-4070642 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 298-436
Cow position: chr29:17804666-17804530 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 300-416
Cow position: chr29:4874750-4874865 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 301-401
Cow position: chr29:39508380-39508281 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 301-428
Cow position: chr29:19187155-19187028 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 301-437
Cow position: chr29:1220002-1220137 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 301-439
Cow position: chr29:5210620-5210484 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 301-439
Cow position: chr29:9709823-9709686 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 301-439
Cow position: chr29:31929116-31928981 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 301-439
Cow position: chr29:40633780-40633635 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 135

Conread position: 303-419
Cow position: chr29:8190073-8190189 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-437
Cow position: chr29:19949434-19949304 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 303-439
Cow position: chr29:17110084-17109952 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 303-439
Cow position: chr29:25737286-25737422 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 127

Conread position: 303-439
Cow position: chr29:28166095-28166226 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 303-439
Cow position: chr29:41530980-41530842 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 41

Conread position: 304-439
Cow position: chr29:22723727-22723593 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 305-439
Cow position: chr29:17297261-17297128 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 43

Conread position: 306-396
Cow position: chr29:40791427-40791337 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 307-437
Cow position: chr29:43251042-43251173 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 124

Conread position: 307-439
Cow position: chr29:36781181-36781312 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 310-419
Cow position: chr29:43088428-43088322 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 311-437
Cow position: chr29:19244339-19244465 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 119

Conread position: 311-437
Cow position: chr29:31981949-31981825 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 313-418
Cow position: chr29:26208092-26207987 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 58

Conread position: 313-438
Cow position: chr29:4423321-4423446 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 118

Conread position: 313-439
Cow position: chr29:19176790-19176921 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 123

Conread position: 313-439
Cow position: chr29:22162132-22162257 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 313-439
Cow position: chr29:23825093-23825218 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 313-439
Cow position: chr29:31934496-31934371 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 314-437
Cow position: chr29:34359705-34359826 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 314-439
Cow position: chr29:5789145-5789021 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 72

Conread position: 314-439
Cow position: chr29:17154894-17154771 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 315-435
Cow position: chr29:27873716-27873597 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 315-439
Cow position: chr29:5520370-5520493 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 38

Conread position: 317-435
Cow position: chr29:4441092-4441210 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 37

Conread position: 318-431
Cow position: chr29:43544491-43544605 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 39

Conread position: 318-439
Cow position: chr29:3293059-3292940 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 22

Conread position: 319-412
Cow position: chr29:6015237-6015144 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 327-439
Cow position: chr29:11434222-11434111 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 327-439
Cow position: chr29:12625873-12625984 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 0

Show alignments to all cow chromosomes.