Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-142
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 32

Conread position: 1-174
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-216
Cow position:
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-219
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 1-225
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-230
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 32

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 32

Conread position: 2-166
Cow position:
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 31

Conread position: 2-170
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 31

Conread position: 2-181
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 31

Conread position: 2-200
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 33

Conread position: 2-203
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 31

Conread position: 2-211
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 10

Conread position: 2-212
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 37, 31

Conread position: 2-212
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 2-214
Cow position:
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 37, 33

Conread position: 2-216
Cow position:
Alignm length: 223
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-217
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 31

Conread position: 2-217
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 31

Conread position: 2-218
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 2-219
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-219
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-222
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 3-152
Cow position:
Alignm length: 150
Alignm identity: 122
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-160
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 36, 29

Conread position: 3-169
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 30

Conread position: 3-170
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 29, 41

Conread position: 3-173
Cow position:
Alignm length: 172
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-192
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 30

Conread position: 3-193
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 30

Conread position: 3-193
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 3-195
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-198
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 30

Conread position: 3-203
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-211
Cow position:
Alignm length: 219
Alignm identity: 174
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-212
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 29

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 30

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 3-214
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 167, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 81

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-219
Cow position:
Alignm length: 218
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-222
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-227
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 36, 30

Conread position: 3-241
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 31

Conread position: 3-242
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-249
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 4-210
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 29

Conread position: 4-212
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 35, 29

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 27

Conread position: 5-170
Cow position:
Alignm length: 167
Alignm identity: 137
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 28

Conread position: 5-170
Cow position:
Alignm length: 167
Alignm identity: 137
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 34, 28

Conread position: 5-212
Cow position:
Alignm length: 209
Alignm identity: 165
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 28

Conread position: 5-213
Cow position:
Alignm length: 210
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 5-217
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 34, 10

Conread position: 5-229
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 177, 167

Conread position: 5-231
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 6-131
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-142
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-155
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 33, 27

Conread position: 6-158
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 27

Conread position: 6-170
Cow position:
Alignm length: 167
Alignm identity: 138
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position:
Alignm length: 202
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 27

Conread position: 6-211
Cow position:
Alignm length: 207
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position:
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position:
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 28

Conread position: 6-214
Cow position:
Alignm length: 211
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 6-214
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 211
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 54

Conread position: 6-215
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 27

Conread position: 6-216
Cow position:
Alignm length: 218
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-219
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 6-221
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 33, 26

Conread position: 6-223
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-225
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 7-181
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 0

Conread position: 7-187
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 40, 26

Conread position: 7-205
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 169, 0

Conread position: 7-214
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 26

Conread position: 7-218
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 26

Conread position: 8-181
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 27

Conread position: 8-215
Cow position:
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-216
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 24

Conread position: 8-217
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 8-217
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 8-219
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 8-222
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 137, 0

Conread position: 8-232
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 25

Conread position: 9-129
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 24

Conread position: 9-131
Cow position:
Alignm length: 124
Alignm identity: 109
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 24

Conread position: 9-149
Cow position:
Alignm length: 142
Alignm identity: 117
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 24

Conread position: 9-170
Cow position:
Alignm length: 163
Alignm identity: 137
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 24

Conread position: 9-218
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 126, 0

Conread position: 10-215
Cow position:
Alignm length: 208
Alignm identity: 162
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 23

Conread position: 10-216
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 23

Conread position: 10-216
Cow position:
Alignm length: 217
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 22

Conread position: 10-216
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 23

Conread position: 10-217
Cow position:
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 5

Conread position: 10-218
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 175, 0

Conread position: 10-221
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 187, 5

Conread position: 12-182
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 103, 176

Conread position: 12-217
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 21

Conread position: 13-197
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 20

Conread position: 13-203
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 20

Conread position: 19-223
Cow position:
Alignm length: 206
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 20-215
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 22-151
Cow position:
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 23-217
Cow position:
Alignm length: 197
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 35-225
Cow position:
Alignm length: 193
Alignm identity: 152
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 34, 144

Conread position: 55-235
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 117, 0

Conread position: 65-241
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 111, 0

Show alignments to all cow chromosomes.