Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-158
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 32

Conread position: 1-214
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 1-216
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 117, 0

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 31

Conread position: 2-157
Cow position:
Alignm length: 157
Alignm identity: 128
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 31

Conread position: 2-158
Cow position:
Alignm length: 158
Alignm identity: 135
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-211
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 37, 31

Conread position: 2-212
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-213
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 32

Conread position: 2-213
Cow position:
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-214
Cow position:
Alignm length: 224
Alignm identity: 177
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 37

Conread position: 2-217
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 63

Conread position: 2-229
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 37, 31

Conread position: 2-241
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 37, 29

Conread position: 3-124
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 30

Conread position: 3-132
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 30

Conread position: 3-134
Cow position:
Alignm length: 133
Alignm identity: 111
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 30

Conread position: 3-146
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 30

Conread position: 3-174
Cow position:
Alignm length: 173
Alignm identity: 146
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-196
Cow position:
Alignm length: 196
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 30

Conread position: 3-206
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 31

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 27

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 26

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 29

Conread position: 3-218
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 30

Conread position: 3-219
Cow position:
Alignm length: 219
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-219
Cow position:
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-222
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-234
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 30

Conread position: 3-246
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 30

Conread position: 3-271
Cow position:
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 4-214
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 179, 0

Conread position: 4-215
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 4-215
Cow position:
Alignm length: 213
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 4-215
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 4-218
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 29

Conread position: 5-133
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 28

Conread position: 5-151
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 28

Conread position: 5-204
Cow position:
Alignm length: 201
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 26

Conread position: 5-215
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 34, 27

Conread position: 5-233
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 6-150
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 33, 27

Conread position: 6-170
Cow position:
Alignm length: 167
Alignm identity: 142
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 5, 28

Conread position: 6-189
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 33, 27

Conread position: 6-191
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position:
Alignm length: 205
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 33, 26

Conread position: 6-212
Cow position:
Alignm length: 208
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 27

Conread position: 6-216
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 72, 0

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 33, 27

Conread position: 6-218
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-219
Cow position:
Alignm length: 216
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-219
Cow position:
Alignm length: 215
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-225
Cow position:
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-232
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 33, 27

Conread position: 6-236
Cow position:
Alignm length: 234
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 7-132
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 26

Conread position: 7-159
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 26

Conread position: 7-193
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 27

Conread position: 7-203
Cow position:
Alignm length: 198
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 26

Conread position: 7-211
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 7-213
Cow position:
Alignm length: 207
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 7-215
Cow position:
Alignm length: 219
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 165, 0

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 26

Conread position: 7-215
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 5

Conread position: 7-218
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 26

Conread position: 8-134
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 23

Conread position: 8-196
Cow position:
Alignm length: 190
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-205
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 25

Conread position: 8-213
Cow position:
Alignm length: 217
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 25

Conread position: 8-214
Cow position:
Alignm length: 208
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-215
Cow position:
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 9-133
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-195
Cow position:
Alignm length: 188
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 9-215
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 30, 24

Conread position: 9-215
Cow position:
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 9-217
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 24

Conread position: 9-217
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 24

Conread position: 9-219
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 24

Conread position: 10-207
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 5

Conread position: 10-214
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 24

Conread position: 10-220
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 7

Conread position: 15-133
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 18

Conread position: 16-240
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 23, 17

Conread position: 19-175
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 20-131
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 14

Conread position: 20-131
Cow position:
Alignm length: 113
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 13

Conread position: 20-149
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 20-204
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 180, 91

Conread position: 20-217
Cow position:
Alignm length: 208
Alignm identity: 162
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 12, 19

Conread position: 23-216
Cow position:
Alignm length: 195
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Show alignments to all cow chromosomes.