Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-114
Cow position:
Alignm length: 116
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 32

Conread position: 1-191
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 32

Conread position: 1-212
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 1-214
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-216
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 33

Conread position: 1-216
Cow position:
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-216
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 37, 32

Conread position: 2-168
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-205
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 31

Conread position: 2-214
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 216
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 2-216
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 31

Conread position: 2-220
Cow position:
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-222
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 31

Conread position: 3-106
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 30

Conread position: 3-137
Cow position:
Alignm length: 136
Alignm identity: 115
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 30

Conread position: 3-150
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 30

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 30

Conread position: 3-203
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 39, 30

Conread position: 3-209
Cow position:
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 30

Conread position: 3-216
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 32

Conread position: 3-216
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 3-217
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-218
Cow position:
Alignm length: 219
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 3-220
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 3-220
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 30

Conread position: 3-222
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 29

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-230
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 4-215
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 28

Conread position: 4-217
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 5-131
Cow position:
Alignm length: 128
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 28

Conread position: 5-170
Cow position:
Alignm length: 170
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 29

Conread position: 5-206
Cow position:
Alignm length: 203
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 26

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 28

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 164
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 32, 11

Conread position: 5-215
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 34, 28

Conread position: 5-215
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 79, 174

Conread position: 5-216
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 34, 28

Conread position: 5-237
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 6-124
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 27

Conread position: 6-136
Cow position:
Alignm length: 132
Alignm identity: 113
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 27

Conread position: 6-170
Cow position:
Alignm length: 166
Alignm identity: 136
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 27

Conread position: 6-180
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 27

Conread position: 6-204
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 25

Conread position: 6-205
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 82, 0

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 26

Conread position: 6-215
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 6-219
Cow position:
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 6-219
Cow position:
Alignm length: 216
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-242
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 111, 0

Conread position: 7-124
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 26

Conread position: 7-141
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 26

Conread position: 7-149
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 28

Conread position: 7-213
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 7-215
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 25

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 26

Conread position: 7-216
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 25

Conread position: 7-359
Cow position:
Alignm length: 354
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 26

Conread position: 8-206
Cow position:
Alignm length: 200
Alignm identity: 160
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 25

Conread position: 8-215
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 9-138
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 24

Conread position: 9-209
Cow position:
Alignm length: 203
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 189

Conread position: 9-228
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 24

Conread position: 10-168
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 22

Conread position: 10-174
Cow position:
Alignm length: 166
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 23

Conread position: 10-203
Cow position:
Alignm length: 195
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 10-215
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 14, 24

Conread position: 10-215
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 23

Conread position: 10-216
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 10-216
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 162, 108

Conread position: 10-221
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 187, 5

Conread position: 10-234
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 24

Conread position: 11-220
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 12-124
Cow position:
Alignm length: 115
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 21

Conread position: 13-215
Cow position:
Alignm length: 213
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 15-213
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 18

Conread position: 17-215
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 178, 12

Conread position: 20-242
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 152, 13

Show alignments to all cow chromosomes.