Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               2-201
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-210
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-218
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               3-123
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-141
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               141
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-174
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-204
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-233
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               4-174
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               142
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               4-213
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-225
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               4-225
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               5-133
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-205
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               6-137
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-181
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               6-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               152
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               6-196
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               6-205
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-211
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               6-211
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               6-212
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               6-213
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               164
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               6-219
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-219
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-224
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-240
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               7-132
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-138
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-147
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-150
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               7-183
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-196
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-198
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-205
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               171, 151
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               32, 28
               

               Conread position:
               7-225
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               8-160
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-204
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               132, 140
               

               Conread position:
               8-214
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               8-237
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               9-122
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-216
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-226
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               10-214
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 25
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               13-170
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               15-215
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               15-243
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               182, 19
               

               Conread position:
               18-216
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               35-221
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               77-222
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               120, 101
               
Show alignments to all cow chromosomes.