Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-154
Cow position: chr13:13529231-13529079 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 127
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 1-215
Cow position: chr13:51837319-51837533 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-225
Cow position: chr13:40426730-40426962 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 172, 32

Conread position: 2-134
Cow position: chr13:20407782-20407914 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-142
Cow position: chr13:41523284-41523145 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 37, 30

Conread position: 2-171
Cow position: chr13:6169838-6170007 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 31

Conread position: 2-213
Cow position: chr13:39229697-39229486 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-217
Cow position: chr13:1529174-1529388 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-217
Cow position: chr13:62603318-62603532 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 31

Conread position: 3-129
Cow position: chr13:29730160-29730286 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 31

Conread position: 3-132
Cow position: chr13:32799322-32799451 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 30

Conread position: 3-180
Cow position: chr13:25082996-25083173 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-183
Cow position: chr13:17090331-17090510 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 149
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 29

Conread position: 3-196
Cow position: chr13:29126758-29126569 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 31

Conread position: 3-206
Cow position: chr13:21660239-21660442 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 30

Conread position: 3-213
Cow position: chr13:18837132-18837352 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 139, 81

Conread position: 3-213
Cow position: chr13:33744700-33744483 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position: chr13:52315148-52315349 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position: chr13:53357802-53358013 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position: chr13:62065128-62065346 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 30

Conread position: 3-215
Cow position: chr13:2311147-2310936 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr13:7810915-7810702 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr13:9663560-9663772 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 26

Conread position: 3-215
Cow position: chr13:10542873-10543086 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr13:34943956-34943744 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-215
Cow position: chr13:54881814-54882025 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr13:62718077-62717870 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr13:4070051-4070265 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr13:39193102-39192890 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr13:50419363-50419152 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr13:51245093-51244879 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 3-216
Cow position: chr13:55813550-55813765 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position: chr13:10018213-10018425 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 28

Conread position: 3-222
Cow position: chr13:8420665-8420445 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 169

Conread position: 4-225
Cow position: chr13:4138705-4138926 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 29

Conread position: 5-154
Cow position: chr13:54724642-54724791 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-160
Cow position: chr13:26159125-26159280 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 132
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 34, 28

Conread position: 5-170
Cow position: chr13:57385765-57385929 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 28

Conread position: 5-215
Cow position: chr13:60997932-60998143 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 28

Conread position: 6-124
Cow position: chr13:19274473-19274355 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 27

Conread position: 6-125
Cow position: chr13:21477101-21476978 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 27

Conread position: 6-151
Cow position: chr13:62121522-62121667 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 26

Conread position: 6-214
Cow position: chr13:50630495-50630287 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position: chr13:13501165-13501370 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 27

Conread position: 6-215
Cow position: chr13:44380940-44380731 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position: chr13:51810226-51810434 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position: chr13:12568102-12568312 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position: chr13:43138569-43138779 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position: chr13:47852487-47852278 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 6-216
Cow position: chr13:50383037-50383245 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 28

Conread position: 6-216
Cow position: chr13:59017255-59017465 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 6-217
Cow position: chr13:17607119-17607330 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position: chr13:49844211-49844430 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 155, 94

Conread position: 6-221
Cow position: chr13:14314673-14314457 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-222
Cow position: chr13:62285487-62285710 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 27

Conread position: 6-223
Cow position: chr13:18716008-18716217 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 27

Conread position: 6-225
Cow position: chr13:38281494-38281712 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-234
Cow position: chr13:32873896-32873666 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 29

Conread position: 6-236
Cow position: chr13:22010071-22009841 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 6-236
Cow position: chr13:53865832-53865603 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 7-124
Cow position: chr13:50580065-50579949 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 26

Conread position: 7-205
Cow position: chr13:51693312-51693511 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 21

Conread position: 7-205
Cow position: chr13:60309681-60309484 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position: chr13:15953866-15954074 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 7-215
Cow position: chr13:26496047-26496252 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position: chr13:34804168-34804378 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position: chr13:41879951-41880160 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 27

Conread position: 7-216
Cow position: chr13:20585100-20584890 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 113, 0

Conread position: 7-216
Cow position: chr13:44139773-44139992 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 26

Conread position: 7-219
Cow position: chr13:14990462-14990250 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-224
Cow position: chr13:58696403-58696619 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 8-215
Cow position: chr13:58177732-58177940 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 25

Conread position: 8-225
Cow position: chr13:1787348-1787131 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 25

Conread position: 9-215
Cow position: chr13:20645152-20645358 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 25

Conread position: 9-215
Cow position: chr13:27477331-27477125 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 9-215
Cow position: chr13:57414598-57414804 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 9-216
Cow position: chr13:61275065-61275263 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 24

Conread position: 9-228
Cow position: chr13:53283198-53283414 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 24

Conread position: 10-200
Cow position: chr13:6948816-6949003 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 5

Conread position: 10-212
Cow position: chr13:6846645-6846434 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 23

Conread position: 10-215
Cow position: chr13:48480071-48480285 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 29, 23

Conread position: 10-215
Cow position: chr13:49540266-49540471 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-236
Cow position: chr13:38525971-38526194 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 11-215
Cow position: chr13:10259737-10259534 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 28, 22

Conread position: 11-216
Cow position: chr13:9460956-9461160 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 22

Conread position: 12-214
Cow position: chr13:8415190-8414987 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 21

Conread position: 14-168
Cow position: chr13:32656325-32656479 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 19

Conread position: 16-215
Cow position: chr13:60632405-60632603 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 17

Conread position: 17-212
Cow position: chr13:7233275-7233468 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 16

Conread position: 23-206
Cow position: chr13:44304271-44304077 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 10

Show alignments to all cow chromosomes.