Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 127
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-225
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 172, 32

Conread position: 2-134
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-142
Cow position:
Alignm length: 142
Alignm identity: 119
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 37, 30

Conread position: 2-171
Cow position:
Alignm length: 173
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 31

Conread position: 2-213
Cow position:
Alignm length: 213
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-217
Cow position:
Alignm length: 217
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-217
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 31

Conread position: 3-129
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 31

Conread position: 3-132
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 30

Conread position: 3-180
Cow position:
Alignm length: 179
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-183
Cow position:
Alignm length: 182
Alignm identity: 149
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 29

Conread position: 3-196
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 31

Conread position: 3-206
Cow position:
Alignm length: 205
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 30

Conread position: 3-213
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 139, 81

Conread position: 3-213
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 26

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 28

Conread position: 3-222
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 169

Conread position: 4-225
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 29

Conread position: 5-154
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-160
Cow position:
Alignm length: 157
Alignm identity: 132
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 34, 28

Conread position: 5-170
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 28

Conread position: 5-215
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 28

Conread position: 6-124
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 27

Conread position: 6-125
Cow position:
Alignm length: 125
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 27

Conread position: 6-151
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 26

Conread position: 6-214
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 164
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 6-216
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 28

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 155, 94

Conread position: 6-221
Cow position:
Alignm length: 218
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-222
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 27

Conread position: 6-223
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 27

Conread position: 6-225
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-234
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 29

Conread position: 6-236
Cow position:
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 6-236
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 7-124
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 26

Conread position: 7-205
Cow position:
Alignm length: 201
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 21

Conread position: 7-205
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 214
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 27

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 113, 0

Conread position: 7-216
Cow position:
Alignm length: 221
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 26

Conread position: 7-219
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-224
Cow position:
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 8-215
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 25

Conread position: 8-225
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 25

Conread position: 9-215
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 25

Conread position: 9-215
Cow position:
Alignm length: 209
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 9-215
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 9-216
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 24

Conread position: 9-228
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 24

Conread position: 10-200
Cow position:
Alignm length: 192
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 5

Conread position: 10-212
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 23

Conread position: 10-215
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 29, 23

Conread position: 10-215
Cow position:
Alignm length: 206
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-236
Cow position:
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 11-215
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 28, 22

Conread position: 11-216
Cow position:
Alignm length: 207
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 22

Conread position: 12-214
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 21

Conread position: 14-168
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 19

Conread position: 16-215
Cow position:
Alignm length: 201
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 17

Conread position: 17-212
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 16

Conread position: 23-206
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 10

Show alignments to all cow chromosomes.